RNA–Protein interactions for RNA: ENST00000433753.4

SEMA3B-204, Transcript of semaphorin 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-204ENST00000433753 GPBP1Q86WP2 473 aa19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 DBNDD1Q9H9R9 158 aa19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 MED24O75448 989 aa19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 EEF2P13639 858 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 PSMC6P62333 389 aa19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 PSMD2Q13200 908 aa19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 CCNI2Q6ZMN8 369 aaPredicted RBP19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 KIAA0825Q8IV33 1275 aa19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 MS4A14Q96JA4 679 aa19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 OSBPL9Q96SU4 736 aa19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 LSM14BQ9BX40 385 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 HPCAL4Q9UM19 191 aa19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 ATF5Q9Y2D1 282 aaPredicted RBP19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 ATP6V0A2Q9Y487 856 aa19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 G3V3G9 751 aa19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 TUBBP07437 444 aa19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 ASTE1Q2TB18 679 aaPredicted RBP19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 DCAF8Q5TAQ9 597 aa19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 FAM204AQ9H8W3 233 aa19.21■□□□□ 0.67
SEMA3B-204ENST00000433753 DDTLA6NHG4 134 aaPredicted RBP19.2■□□□□ 0.66
SEMA3B-204ENST00000433753 CASP5P51878 434 aa19.2■□□□□ 0.66
SEMA3B-204ENST00000433753 FAM83BQ5T0W9 1011 aa19.2■□□□□ 0.66
SEMA3B-204ENST00000433753 GPATCH4Q5T3I0 446 aaKnown RBP19.2■□□□□ 0.66
SEMA3B-204ENST00000433753 DNAAF5Q86Y56 855 aa19.2■□□□□ 0.66
SEMA3B-204ENST00000433753 SCFD1Q8WVM8 642 aa19.2■□□□□ 0.66
SEMA3B-204ENST00000433753 BMP2KQ9NSY1 1161 aaPredicted RBP19.2■□□□□ 0.66
SEMA3B-204ENST00000433753 SWAP70Q9UH65 585 aa19.2■□□□□ 0.66
SEMA3B-204ENST00000433753 PCDHA2Q9Y5H9 948 aa19.2■□□□□ 0.66
SEMA3B-204ENST00000433753 RNF40O75150 1001 aa19.2■□□□□ 0.66
SEMA3B-204ENST00000433753 USH1GQ495M9 461 aa19.2■□□□□ 0.66
SEMA3B-204ENST00000433753 ARSHQ5FYA8 562 aa19.2■□□□□ 0.66
SEMA3B-204ENST00000433753 SLC30A10Q6XR72 485 aa19.2■□□□□ 0.66
SEMA3B-204ENST00000433753 SPATA4Q8NEY3 305 aa19.2■□□□□ 0.66
SEMA3B-204ENST00000433753 SELENOOQ9BVL4 669 aa19.2■□□□□ 0.66
SEMA3B-204ENST00000433753 TRIM37O94972 964 aa19.19■□□□□ 0.66
SEMA3B-204ENST00000433753 LCA5LO95447 670 aa19.19■□□□□ 0.66
SEMA3B-204ENST00000433753 CYP11B2P19099 503 aa19.19■□□□□ 0.66
SEMA3B-204ENST00000433753 PRR16Q569H4 304 aa19.19■□□□□ 0.66
SEMA3B-204ENST00000433753 MEX3CQ5U5Q3 659 aaKnown RBP19.19■□□□□ 0.66
SEMA3B-204ENST00000433753 FOXR1Q6PIV2 292 aa19.19■□□□□ 0.66
SEMA3B-204ENST00000433753 TRIM34Q9BYJ4 488 aa19.19■□□□□ 0.66
SEMA3B-204ENST00000433753 ZC3H4Q9UPT8 1303 aaKnown RBP19.19■□□□□ 0.66
SEMA3B-204ENST00000433753 KRT18P05783 430 aaKnown RBP19.19■□□□□ 0.66
SEMA3B-204ENST00000433753 HLA-DOAP06340 250 aa19.19■□□□□ 0.66
SEMA3B-204ENST00000433753 GGCXP38435 758 aa19.19■□□□□ 0.66
SEMA3B-204ENST00000433753 RBM5P52756 815 aaKnown RBP eCLIP19.19■□□□□ 0.663e-6■■□□□ 12.7
SEMA3B-204ENST00000433753 FAM71BQ8TC56 605 aa19.19■□□□□ 0.66
SEMA3B-204ENST00000433753 TEKT1Q969V4 418 aa19.19■□□□□ 0.66
SEMA3B-204ENST00000433753 RPGRIP1Q96KN7 1286 aa19.19■□□□□ 0.66
SEMA3B-204ENST00000433753 ANO3Q9BYT9 981 aa19.19■□□□□ 0.66
SEMA3B-204ENST00000433753 LRRC27Q9C0I9 530 aa19.19■□□□□ 0.66
SEMA3B-204ENST00000433753 EMILIN3Q9NT22 766 aa19.19■□□□□ 0.66
SEMA3B-204ENST00000433753 FOCADQ5VW36 1801 aa19.18■□□□□ 0.66
SEMA3B-204ENST00000433753 TARSL2A2RTX5 802 aaKnown RBP19.18■□□□□ 0.66
SEMA3B-204ENST00000433753 CDC37Q16543 378 aaPredicted RBP19.18■□□□□ 0.66
SEMA3B-204ENST00000433753 PPP1R18Q6NYC8 613 aa19.18■□□□□ 0.66
SEMA3B-204ENST00000433753 TLR10Q9BXR5 811 aa19.18■□□□□ 0.66
SEMA3B-204ENST00000433753 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
SEMA3B-204ENST00000433753 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.18■□□□□ 0.668e-7■■□□□ 11.8
SEMA3B-204ENST00000433753 THSD7AQ9UPZ6 1657 aa19.18■□□□□ 0.66
SEMA3B-204ENST00000433753 MYH4Q9Y623 1939 aa19.18■□□□□ 0.66
SEMA3B-204ENST00000433753 GDF11O95390 407 aa19.18■□□□□ 0.66
SEMA3B-204ENST00000433753 PABPC4Q13310 644 aaKnown RBP eCLIP19.18■□□□□ 0.66
SEMA3B-204ENST00000433753 ADAM9Q13443 819 aa19.18■□□□□ 0.66
SEMA3B-204ENST00000433753 SEPT2Q15019 361 aa19.18■□□□□ 0.66
SEMA3B-204ENST00000433753 MSL3Q8N5Y2 521 aaKnown RBP19.18■□□□□ 0.66
SEMA3B-204ENST00000433753 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.18■□□□□ 0.66
SEMA3B-204ENST00000433753 PSD3Q9NYI0 1048 aa19.18■□□□□ 0.66
SEMA3B-204ENST00000433753 PACSIN2Q9UNF0 486 aaPredicted RBP19.18■□□□□ 0.66
SEMA3B-204ENST00000433753 UBR3Q6ZT12 1888 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 MEIS2O14770 477 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 ACTN1P12814 892 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 CRKP46108 304 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 RNASE9P60153 205 aaKnown RBP19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 RAPGEF1Q13905 1077 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 SKIDA1Q1XH10 827 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 KLHDC7AQ5VTJ3 777 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 SLFN13Q68D06 897 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 SIAH1Q8IUQ4 282 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 CCDC65Q8IXS2 484 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 TBC1D5Q92609 795 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 PACSIN1Q9BY11 444 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 KCTD10Q9H3F6 313 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 ABCB11O95342 1321 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 KLRG2A4D1S0 409 aaPredicted RBP19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 KCTD19Q17RG1 926 aaPredicted RBP19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 MAP9Q49MG5 647 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 SFMBT2Q5VUG0 894 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 CATSPER3Q86XQ3 398 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 PROM2Q8N271 834 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 FAM133AQ8N9E0 248 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 NT5C3AQ9H0P0 336 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 KCNMB3Q9NPA1 279 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 ADAMTS1Q9UHI8 967 aa19.17■□□□□ 0.66
SEMA3B-204ENST00000433753 AGPSO00116 658 aa19.16■□□□□ 0.66
SEMA3B-204ENST00000433753 FTCDO95954 541 aa19.16■□□□□ 0.66
SEMA3B-204ENST00000433753 ACTN2P35609 894 aa19.16■□□□□ 0.66
SEMA3B-204ENST00000433753 CCDC181Q5TID7 509 aa19.16■□□□□ 0.66
SEMA3B-204ENST00000433753 CYP2W1Q8TAV3 490 aa19.16■□□□□ 0.66
SEMA3B-204ENST00000433753 IQCDQ96DY2 449 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms