RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 UBE2ZQ9H832 354 aaPredicted RBP17.22■□□□□ 0.35
PRKDC-203ENST00000432581 TCF20Q9UGU0 1960 aaKnown RBP17.22■□□□□ 0.35
PRKDC-203ENST00000432581 FRMPD4Q14CM0 1322 aa17.21■□□□□ 0.35
PRKDC-203ENST00000432581 CYTH3O43739 400 aa17.21■□□□□ 0.35
PRKDC-203ENST00000432581 CYP21A2P08686 494 aa17.21■□□□□ 0.35
PRKDC-203ENST00000432581 TROAPQ12815 778 aa17.21■□□□□ 0.35
PRKDC-203ENST00000432581 WTAPQ15007 396 aa17.21■□□□□ 0.35
PRKDC-203ENST00000432581 RALYLQ86SE5 291 aaKnown RBP17.21■□□□□ 0.35
PRKDC-203ENST00000432581 EXOC6Q8TAG9 804 aa17.21■□□□□ 0.35
PRKDC-203ENST00000432581 SP7Q8TDD2 431 aaPredicted RBP17.21■□□□□ 0.35
PRKDC-203ENST00000432581 SEPT8Q92599 483 aa17.21■□□□□ 0.35
PRKDC-203ENST00000432581 FAM122AQ96E09 287 aa17.21■□□□□ 0.35
PRKDC-203ENST00000432581 SAMD11Q96NU1 681 aa17.21■□□□□ 0.35
PRKDC-203ENST00000432581 EPHX3Q9H6B9 360 aa17.21■□□□□ 0.35
PRKDC-203ENST00000432581 PTPRSQ13332 1948 aa17.21■□□□□ 0.35
PRKDC-203ENST00000432581 COL4A4P53420 1690 aaPredicted RBP17.2■□□□□ 0.34
PRKDC-203ENST00000432581 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.2■□□□□ 0.34
PRKDC-203ENST00000432581 TREHO43280 583 aa17.2■□□□□ 0.34
PRKDC-203ENST00000432581 FIBPO43427 364 aa17.2■□□□□ 0.34
PRKDC-203ENST00000432581 CATIPQ7Z7H3 387 aa17.2■□□□□ 0.34
PRKDC-203ENST00000432581 NCOA7Q8NI08 942 aa17.2■□□□□ 0.34
PRKDC-203ENST00000432581 ZFP91Q96JP5 570 aaPredicted RBP17.2■□□□□ 0.34
PRKDC-203ENST00000432581 C17orf80Q9BSJ5 609 aa17.2■□□□□ 0.34
PRKDC-203ENST00000432581 RNPEPQ9H4A4 650 aa17.2■□□□□ 0.34
PRKDC-203ENST00000432581 ZNF215Q9UL58 517 aaPredicted RBP17.2■□□□□ 0.34
PRKDC-203ENST00000432581 MYH6P13533 1939 aa17.19■□□□□ 0.34
PRKDC-203ENST00000432581 BRWD1Q9NSI6 2320 aa17.19■□□□□ 0.34
PRKDC-203ENST00000432581 SPATA31C2B4DYI2 1134 aa17.19■□□□□ 0.34
PRKDC-203ENST00000432581 GSPT1P15170 499 aaKnown RBP17.19■□□□□ 0.34
PRKDC-203ENST00000432581 MRPS9P82933 396 aaKnown RBP17.19■□□□□ 0.34
PRKDC-203ENST00000432581 PTPROQ16827 1216 aa17.19■□□□□ 0.34
PRKDC-203ENST00000432581 LEXMQ3ZCV2 418 aa17.19■□□□□ 0.34
PRKDC-203ENST00000432581 TMEM31Q5JXX7 168 aa17.19■□□□□ 0.34
PRKDC-203ENST00000432581 TTC22Q5TAA0 569 aa17.19■□□□□ 0.34
PRKDC-203ENST00000432581 XRRA1Q6P2D8 792 aa17.19■□□□□ 0.34
PRKDC-203ENST00000432581 CYFIP1Q7L576 1253 aa17.19■□□□□ 0.34
PRKDC-203ENST00000432581 MRPL38Q96DV4 380 aaKnown RBP17.19■□□□□ 0.34
PRKDC-203ENST00000432581 YME1L1Q96TA2 773 aa17.19■□□□□ 0.34
PRKDC-203ENST00000432581 GPR20Q99678 358 aa17.19■□□□□ 0.34
PRKDC-203ENST00000432581 ARIH1Q9Y4X5 557 aaPredicted RBP17.19■□□□□ 0.34
PRKDC-203ENST00000432581 E7EWF7 191 aa17.18■□□□□ 0.34
PRKDC-203ENST00000432581 CTSHP09668 335 aa17.18■□□□□ 0.34
PRKDC-203ENST00000432581 TIGD5Q53EQ6 642 aa17.18■□□□□ 0.34
PRKDC-203ENST00000432581 APBB2Q92870 758 aa17.18■□□□□ 0.34
PRKDC-203ENST00000432581 CUL5Q93034 780 aa17.18■□□□□ 0.34
PRKDC-203ENST00000432581 TOP1MTQ969P6 601 aa17.18■□□□□ 0.34
PRKDC-203ENST00000432581 MAP3K14Q99558 947 aa17.18■□□□□ 0.34
PRKDC-203ENST00000432581 SENP7Q9BQF6 1050 aa17.18■□□□□ 0.34
PRKDC-203ENST00000432581 LRFN3Q9BTN0 628 aa17.18■□□□□ 0.34
PRKDC-203ENST00000432581 BCAS3Q9H6U6 928 aa17.18■□□□□ 0.34
PRKDC-203ENST00000432581 SENP2Q9HC62 589 aa17.18■□□□□ 0.34
PRKDC-203ENST00000432581 SETD4Q9NVD3 440 aa17.18■□□□□ 0.34
PRKDC-203ENST00000432581 HCN4Q9Y3Q4 1203 aa17.18■□□□□ 0.34
PRKDC-203ENST00000432581 KCNA5P22460 613 aa17.17■□□□□ 0.34
PRKDC-203ENST00000432581 PTH1RQ03431 593 aa17.17■□□□□ 0.34
PRKDC-203ENST00000432581 SEMA3FQ13275 785 aa17.17■□□□□ 0.34
PRKDC-203ENST00000432581 EPC2Q52LR7 807 aa17.17■□□□□ 0.34
PRKDC-203ENST00000432581 PCNX4Q63HM2 1172 aa17.17■□□□□ 0.34
PRKDC-203ENST00000432581 RTEL1Q9NZ71 1219 aa17.17■□□□□ 0.34
PRKDC-203ENST00000432581 PIK3CDO00329 1044 aa17.16■□□□□ 0.34
PRKDC-203ENST00000432581 GPR37L1O60883 481 aa17.16■□□□□ 0.34
PRKDC-203ENST00000432581 CHMLP26374 656 aa17.16■□□□□ 0.34
PRKDC-203ENST00000432581 KIF5BP33176 963 aa17.16■□□□□ 0.34
PRKDC-203ENST00000432581 PUS10Q3MIT2 529 aaKnown RBP17.16■□□□□ 0.34
PRKDC-203ENST00000432581 FAM26DQ5JW98 314 aa17.16■□□□□ 0.34
PRKDC-203ENST00000432581 NLRX1Q86UT6 975 aa17.16■□□□□ 0.34
PRKDC-203ENST00000432581 TRIM50Q86XT4 487 aa17.16■□□□□ 0.34
PRKDC-203ENST00000432581 GIMAP8Q8ND71 665 aaPredicted RBP17.16■□□□□ 0.34
PRKDC-203ENST00000432581 CTCFLQ8NI51 663 aaPredicted RBP17.16■□□□□ 0.34
PRKDC-203ENST00000432581 SMARCC2Q8TAQ2 1214 aa17.16■□□□□ 0.34
PRKDC-203ENST00000432581 PIBF1Q8WXW3 757 aa17.16■□□□□ 0.34
PRKDC-203ENST00000432581 RRP36Q96EU6 259 aaKnown RBP17.16■□□□□ 0.34
PRKDC-203ENST00000432581 SPZ1Q9BXG8 430 aa17.16■□□□□ 0.34
PRKDC-203ENST00000432581 NRCAMQ92823 1304 aa17.16■□□□□ 0.34
PRKDC-203ENST00000432581 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.15■□□□□ 0.34
PRKDC-203ENST00000432581 PI4K2BG5E9Z4 385 aa17.15■□□□□ 0.34
PRKDC-203ENST00000432581 H3BNC9 293 aa17.15■□□□□ 0.34
PRKDC-203ENST00000432581 DDAH1O94760 285 aa17.15■□□□□ 0.34
PRKDC-203ENST00000432581 PDE4AP27815 886 aa17.15■□□□□ 0.34
PRKDC-203ENST00000432581 SMARCA1P28370 1054 aa17.15■□□□□ 0.34
PRKDC-203ENST00000432581 ADAM17P78536 824 aa17.15■□□□□ 0.34
PRKDC-203ENST00000432581 ARHGAP4P98171 946 aa17.15■□□□□ 0.34
PRKDC-203ENST00000432581 UTP14CQ5TAP6 766 aaKnown RBP17.15■□□□□ 0.34
PRKDC-203ENST00000432581 FAM178BQ8IXR5 827 aa17.15■□□□□ 0.34
PRKDC-203ENST00000432581 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.15■□□□□ 0.34
PRKDC-203ENST00000432581 IGDCC4Q8TDY8 1250 aa17.15■□□□□ 0.34
PRKDC-203ENST00000432581 LMBR1Q8WVP7 490 aa17.15■□□□□ 0.34
PRKDC-203ENST00000432581 CDHR1Q96JP9 859 aa17.15■□□□□ 0.34
PRKDC-203ENST00000432581 LZTS2Q9BRK4 669 aa17.15■□□□□ 0.34
PRKDC-203ENST00000432581 IFIH1Q9BYX4 1025 aaKnown RBP17.15■□□□□ 0.34
PRKDC-203ENST00000432581 SEC63Q9UGP8 760 aaKnown RBP17.15■□□□□ 0.34
PRKDC-203ENST00000432581 TAF6LQ9Y6J9 622 aa17.15■□□□□ 0.34
PRKDC-203ENST00000432581 MYH7BA7E2Y1 1941 aa17.15■□□□□ 0.34
PRKDC-203ENST00000432581 COL4A6Q14031 1691 aa17.14■□□□□ 0.33
PRKDC-203ENST00000432581 UPP2O95045 317 aa17.14■□□□□ 0.33
PRKDC-203ENST00000432581 GNAQP50148 359 aa17.14■□□□□ 0.33
PRKDC-203ENST00000432581 ANTXR2P58335 489 aa17.14■□□□□ 0.33
PRKDC-203ENST00000432581 GPM6BQ13491 265 aa17.14■□□□□ 0.33
PRKDC-203ENST00000432581 TAF2Q6P1X5 1199 aa17.14■□□□□ 0.33
PRKDC-203ENST00000432581 USP17L6PQ6QN14 398 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms