RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 MTMR8Q96EF0 704 aa25.7■■□□□ 1.7
PTPRA-207ENST00000431048 UPF3BQ9BZI7 483 aaKnown RBP25.7■■□□□ 1.7
PTPRA-207ENST00000431048 TUT1Q9H6E5 874 aaKnown RBP25.7■■□□□ 1.7
PTPRA-207ENST00000431048 RB1P06400 928 aa25.69■■□□□ 1.7
PTPRA-207ENST00000431048 SMIM10L2AP0DMW4 78 aa25.69■■□□□ 1.7
PTPRA-207ENST00000431048 SMIM10L2BP0DMW5 78 aa25.69■■□□□ 1.7
PTPRA-207ENST00000431048 UBA1P22314 1058 aaKnown RBP25.69■■□□□ 1.7
PTPRA-207ENST00000431048 PGM5Q15124 567 aa25.69■■□□□ 1.7
PTPRA-207ENST00000431048 RNPEPQ9H4A4 650 aa25.69■■□□□ 1.7
PTPRA-207ENST00000431048 MLXIPQ9HAP2 919 aa25.69■■□□□ 1.7
PTPRA-207ENST00000431048 ZSWIM5Q9P217 1185 aa25.69■■□□□ 1.7
PTPRA-207ENST00000431048 C5orf67F2Z3F1 127 aa25.68■■□□□ 1.7
PTPRA-207ENST00000431048 TREHO43280 583 aa25.68■■□□□ 1.7
PTPRA-207ENST00000431048 CTC1Q2NKJ3 1217 aa25.68■■□□□ 1.7
PTPRA-207ENST00000431048 FBXL18Q96ME1 805 aa25.68■■□□□ 1.7
PTPRA-207ENST00000431048 LMAN2LQ9H0V9 348 aa25.68■■□□□ 1.7
PTPRA-207ENST00000431048 UPP2O95045 317 aa25.67■■□□□ 1.7
PTPRA-207ENST00000431048 GNAT1P11488 350 aa25.67■■□□□ 1.7
PTPRA-207ENST00000431048 LTBRP36941 435 aa25.67■■□□□ 1.7
PTPRA-207ENST00000431048 FAM26DQ5JW98 314 aa25.67■■□□□ 1.7
PTPRA-207ENST00000431048 USP26Q9BXU7 913 aa25.67■■□□□ 1.7
PTPRA-207ENST00000431048 OSBPL7Q9BZF2 842 aa25.67■■□□□ 1.7
PTPRA-207ENST00000431048 CLDND1Q9NY35 253 aa25.67■■□□□ 1.7
PTPRA-207ENST00000431048 B4E1Z4 1266 aa25.66■■□□□ 1.7
PTPRA-207ENST00000431048 ZBTB5O15062 677 aa25.66■■□□□ 1.7
PTPRA-207ENST00000431048 SORBS3O60504 671 aa25.66■■□□□ 1.7
PTPRA-207ENST00000431048 PPP1R11O60927 126 aaPredicted RBP25.66■■□□□ 1.7
PTPRA-207ENST00000431048 LGALS2P05162 132 aa25.66■■□□□ 1.7
PTPRA-207ENST00000431048 SDSP20132 328 aa25.66■■□□□ 1.7
PTPRA-207ENST00000431048 CCND2P30279 289 aa25.66■■□□□ 1.7
PTPRA-207ENST00000431048 IL31RAQ8NI17 732 aa25.66■■□□□ 1.7
PTPRA-207ENST00000431048 IL17RAQ96F46 866 aa25.66■■□□□ 1.7
PTPRA-207ENST00000431048 IFIH1Q9BYX4 1025 aaKnown RBP25.66■■□□□ 1.7
PTPRA-207ENST00000431048 PCDHA1Q9Y5I3 950 aa25.66■■□□□ 1.7
PTPRA-207ENST00000431048 MYH6P13533 1939 aa25.65■■□□□ 1.7
PTPRA-207ENST00000431048 TRIM6-TRIM34B2RNG4 842 aa25.65■■□□□ 1.7
PTPRA-207ENST00000431048 TRAF1Q13077 416 aa25.65■■□□□ 1.7
PTPRA-207ENST00000431048 SMAD2Q15796 467 aaKnown RBP25.65■■□□□ 1.7
PTPRA-207ENST00000431048 EP400NLQ6ZTU2 488 aa25.65■■□□□ 1.7
PTPRA-207ENST00000431048 RPAINQ86UA6 219 aa25.65■■□□□ 1.7
PTPRA-207ENST00000431048 STAG2Q8N3U4 1231 aa25.65■■□□□ 1.7
PTPRA-207ENST00000431048 FIBCD1Q8N539 461 aa25.65■■□□□ 1.7
PTPRA-207ENST00000431048 RWDD3Q9Y3V2 267 aa25.65■■□□□ 1.7
PTPRA-207ENST00000431048 KLRF2D3W0D1 207 aa25.64■■□□□ 1.7
PTPRA-207ENST00000431048 HOXA13P31271 388 aaPredicted RBP25.64■■□□□ 1.7
PTPRA-207ENST00000431048 ICAM3P32942 547 aa25.64■■□□□ 1.7
PTPRA-207ENST00000431048 IRS1P35568 1242 aa25.64■■□□□ 1.7
PTPRA-207ENST00000431048 BMPR1AP36894 532 aa25.64■■□□□ 1.7
PTPRA-207ENST00000431048 HDAC1Q13547 482 aaPredicted RBP25.64■■□□□ 1.7
PTPRA-207ENST00000431048 GPKOWQ92917 476 aaPredicted RBP eCLIP25.64■■□□□ 1.7
PTPRA-207ENST00000431048 RILPL2Q969X0 211 aa25.64■■□□□ 1.7
PTPRA-207ENST00000431048 MFSD14AQ96MC6 490 aa25.64■■□□□ 1.7
PTPRA-207ENST00000431048 MYO7AQ13402 2215 aa25.64■■□□□ 1.69
PTPRA-207ENST00000431048 WDFY4Q6ZS81 3184 aa25.63■■□□□ 1.69
PTPRA-207ENST00000431048 GCOM1H8Y6P7 765 aaPredicted RBP25.63■■□□□ 1.69
PTPRA-207ENST00000431048 CTSHP09668 335 aa25.63■■□□□ 1.69
PTPRA-207ENST00000431048 LINC00271P0C7V0 271 aa25.63■■□□□ 1.69
PTPRA-207ENST00000431048 POLR2MP0CAP2 368 aa25.63■■□□□ 1.69
PTPRA-207ENST00000431048 ADAM17P78536 824 aa25.63■■□□□ 1.69
PTPRA-207ENST00000431048 POP1Q99575 1024 aaKnown RBP25.63■■□□□ 1.69
PTPRA-207ENST00000431048 C11orf84Q9BUA3 381 aaPredicted RBP25.63■■□□□ 1.69
PTPRA-207ENST00000431048 KRT23Q9C075 422 aa25.63■■□□□ 1.69
PTPRA-207ENST00000431048 STAM2O75886 525 aa25.62■■□□□ 1.69
PTPRA-207ENST00000431048 NEDD9Q14511 834 aa25.62■■□□□ 1.69
PTPRA-207ENST00000431048 HERC4Q5GLZ8 1057 aaPredicted RBP25.62■■□□□ 1.69
PTPRA-207ENST00000431048 METTL7BQ6UX53 244 aa25.62■■□□□ 1.69
PTPRA-207ENST00000431048 HFE2Q6ZVN8 426 aa25.62■■□□□ 1.69
PTPRA-207ENST00000431048 BCAS3Q9H6U6 928 aa25.62■■□□□ 1.69
PTPRA-207ENST00000431048 SETD4Q9NVD3 440 aa25.62■■□□□ 1.69
PTPRA-207ENST00000431048 MAD2L2Q9UI95 211 aa25.62■■□□□ 1.69
PTPRA-207ENST00000431048 TRIOO75962 3097 aa25.62■■□□□ 1.69
PTPRA-207ENST00000431048 RALGAPA2Q2PPJ7 1873 aa25.62■■□□□ 1.69
PTPRA-207ENST00000431048 ZNF318Q5VUA4 2279 aa25.61■■□□□ 1.69
PTPRA-207ENST00000431048 PALM3A6NDB9 673 aaPredicted RBP25.61■■□□□ 1.69
PTPRA-207ENST00000431048 NOP56O00567 594 aaKnown RBP25.61■■□□□ 1.69
PTPRA-207ENST00000431048 CTNNB1P35222 781 aa25.61■■□□□ 1.69
PTPRA-207ENST00000431048 HYAL1Q12794 435 aa25.61■■□□□ 1.69
PTPRA-207ENST00000431048 GNPTABQ3T906 1256 aa25.61■■□□□ 1.69
PTPRA-207ENST00000431048 IFIT1BQ5T764 474 aaKnown RBP25.61■■□□□ 1.69
PTPRA-207ENST00000431048 CLP1Q92989 425 aaKnown RBP25.61■■□□□ 1.69
PTPRA-207ENST00000431048 GPR20Q99678 358 aa25.61■■□□□ 1.69
PTPRA-207ENST00000431048 UBAC1Q9BSL1 405 aa25.61■■□□□ 1.69
PTPRA-207ENST00000431048 DSCC1Q9BVC3 393 aa25.61■■□□□ 1.69
PTPRA-207ENST00000431048 CNNM2Q9H8M5 875 aa25.61■■□□□ 1.69
PTPRA-207ENST00000431048 NLRC5Q86WI3 1866 aa25.6■■□□□ 1.69
PTPRA-207ENST00000431048 SPATA31C2B4DYI2 1134 aa25.6■■□□□ 1.69
PTPRA-207ENST00000431048 MBTPS2O43462 519 aa25.6■■□□□ 1.69
PTPRA-207ENST00000431048 IMMTQ16891 758 aaKnown RBP25.6■■□□□ 1.69
PTPRA-207ENST00000431048 INPP4AQ96PE3 977 aaPredicted RBP25.6■■□□□ 1.69
PTPRA-207ENST00000431048 RC3H2Q9HBD1 1191 aaKnown RBP25.6■■□□□ 1.69
PTPRA-207ENST00000431048 LAMA4Q16363 1823 aa25.59■■□□□ 1.69
PTPRA-207ENST00000431048 GRM6O15303 877 aa25.59■■□□□ 1.69
PTPRA-207ENST00000431048 SEC23AQ15436 765 aa25.59■■□□□ 1.69
PTPRA-207ENST00000431048 ZFP91Q96JP5 570 aaPredicted RBP25.59■■□□□ 1.69
PTPRA-207ENST00000431048 RIOX1Q9H6W3 641 aa25.59■■□□□ 1.69
PTPRA-207ENST00000431048 EHMT1Q9H9B1 1298 aa25.59■■□□□ 1.69
PTPRA-207ENST00000431048 ZNF215Q9UL58 517 aaPredicted RBP25.59■■□□□ 1.69
PTPRA-207ENST00000431048 FRMPD4Q14CM0 1322 aa25.59■■□□□ 1.69
PTPRA-207ENST00000431048 CHRNA1P02708 482 aa25.58■■□□□ 1.69
PTPRA-207ENST00000431048 MRPS9P82933 396 aaKnown RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms