RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 CUTAO60888 179 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 SLC25A27O95847 323 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 SSBP05455 408 aaKnown RBP eCLIP10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 FDX1P10109 184 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 CMA1P23946 247 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 GCLCP48506 637 aaPredicted RBP10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 SOX10P56693 466 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 LACTBP83111 547 aaPredicted RBP10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 PDE4DQ08499 809 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 HSDL1Q3SXM5 330 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 MAEAQ7L5Y9 396 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 OTOP1Q7RTM1 612 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 SNX29Q8TEQ0 813 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 MAML3Q96JK9 1138 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 PNMA5Q96PV4 448 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 MROH8Q9H579 483 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 AGO4Q9HCK5 861 aaKnown RBP10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 ZHX1Q9UKY1 873 aaPredicted RBP10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 HPSEQ9Y251 543 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 CYP3A7-CYP3A51PA0A087WV96 503 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 PSMD10O75832 226 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 CYP3A4P08684 503 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 CYP3A7P24462 503 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 CIITAP33076 1130 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 FLT3LGP49771 235 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 FAM160A1Q05DH4 1040 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 CCDC173Q0VFZ6 552 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 GRB10Q13322 594 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 GRB14Q14449 540 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 ZNF792Q3KQV3 632 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 CCDC73Q6ZRK6 1079 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 CATSPER3Q86XQ3 398 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 TPH2Q8IWU9 490 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 IGSF22Q8N9C0 903 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 RNF214Q8ND24 703 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 ZNF296Q8WUU4 475 aaPredicted RBP10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 DYDC2Q96IM9 177 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 KIAA1024Q9UPX6 916 aa10.72□□□□□ -0.69
HMGCLL1-206ENST00000428842 UNC80Q8N2C7 3258 aa10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 ESPNB1AK53 854 aa10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 UBA1P22314 1058 aaKnown RBP10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 MARK3P27448 753 aa10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 CCND2P30279 289 aa10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 UBA7P41226 1012 aa10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 MCM6Q14566 821 aa10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 STXBP2Q15833 593 aa10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 Q4G0T1 1027 aa10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 CABP7Q86V35 215 aa10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 EEF2KMTQ96G04 330 aa10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 INPP4AQ96PE3 977 aaPredicted RBP10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 SDF4Q9BRK5 362 aa10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 JADE2Q9NQC1 790 aa10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 DDX19AQ9NUU7 478 aaKnown RBP10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 GJD2Q9UKL4 321 aa10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 CEP131Q9UPN4 1083 aa10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 MAPK8IP1Q9UQF2 711 aa10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 SLC45A1Q9Y2W3 748 aa10.71□□□□□ -0.69
HMGCLL1-206ENST00000428842 MGAMO43451 1857 aa10.71□□□□□ -0.7
HMGCLL1-206ENST00000428842 PFASO15067 1338 aa10.71□□□□□ -0.7
HMGCLL1-206ENST00000428842 SPATA31C1P0DKV0 1188 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 PDIA4P13667 645 aaKnown RBP10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 KCNA2P16389 499 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 CCNA1P78396 465 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 GHRHRQ02643 423 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 CUL4BQ13620 913 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 PLA2G4FQ68DD2 849 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 DYMQ7RTS9 669 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 GLIS3Q8NEA6 775 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 TRIB2Q92519 343 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 HHIPL1Q96JK4 782 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 MBOAT7Q96N66 472 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 FBXO40Q9UH90 709 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 XIRP2A4UGR9 3374 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 FRMPD4Q14CM0 1322 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 SFI1A8K8P3 1242 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 ACTN4O43707 911 aaKnown RBP10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 HSPA6P17066 643 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 CCT6AP40227 531 aaKnown RBP10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 MORN1Q5T089 497 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 GLT8D2Q9H1C3 349 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 IKZF4Q9H2S9 585 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 LRRC37A2A6NM11 1700 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 WDR81Q562E7 1941 aa10.7□□□□□ -0.7
HMGCLL1-206ENST00000428842 GGPS1O95749 300 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 INHBEP58166 350 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 SP3Q02447 781 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 E2F4Q16254 413 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 HSP90AA4PQ58FG1 418 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 ATL3Q6DD88 541 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 JMYQ8N9B5 988 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 CNNM3Q8NE01 707 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 RGS22Q8NE09 1264 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 TRPV1Q8NER1 839 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 SLC5A5Q92911 643 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 ZNF668Q96K58 619 aaPredicted RBP10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 EIF2AK1Q9BQI3 630 aaKnown RBP10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 TNMDQ9H2S6 317 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 BLOC1S4Q9NUP1 217 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 CEP290O15078 2479 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms