RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 XBP1P17861 261 aa17.6■□□□□ 0.41
C9orf3-206ENST00000428313 KRT2P35908 639 aa17.6■□□□□ 0.41
C9orf3-206ENST00000428313 SKIV2L2P42285 1042 aaKnown RBP17.6■□□□□ 0.41
C9orf3-206ENST00000428313 CSGALNACT2Q8N6G5 542 aa17.6■□□□□ 0.41
C9orf3-206ENST00000428313 SCFD2Q8WU76 684 aa17.6■□□□□ 0.41
C9orf3-206ENST00000428313 DUSP9Q99956 384 aaKnown RBP17.6■□□□□ 0.41
C9orf3-206ENST00000428313 NEUROG2Q9H2A3 272 aa17.6■□□□□ 0.41
C9orf3-206ENST00000428313 PIDD1Q9HB75 910 aa17.6■□□□□ 0.41
C9orf3-206ENST00000428313 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.6■□□□□ 0.41
C9orf3-206ENST00000428313 C5P01031 1676 aa17.6■□□□□ 0.41
C9orf3-206ENST00000428313 ARFGEF2Q9Y6D5 1785 aa17.6■□□□□ 0.41
C9orf3-206ENST00000428313 BUB1O43683 1085 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 SNX3O60493 162 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 PALMO75781 387 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 CIAO1O76071 339 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 MYL1P05976 194 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 ACADSP16219 412 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 RASSF7Q02833 373 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 KLC1Q07866 573 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 TBC1D5Q92609 795 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 PGM2Q96G03 612 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 CNOT6LQ96LI5 555 aaKnown RBP17.59■□□□□ 0.41
C9orf3-206ENST00000428313 PLEKHG4BQ96PX9 1271 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 NOC4LQ9BVI4 516 aaKnown RBP17.59■□□□□ 0.41
C9orf3-206ENST00000428313 VCXQ9H320 206 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 SUDS3Q9H7L9 328 aaPredicted RBP17.59■□□□□ 0.41
C9orf3-206ENST00000428313 LUC7LQ9NQ29 371 aaKnown RBP17.59■□□□□ 0.41
C9orf3-206ENST00000428313 PNMA2Q9UL42 364 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 BICDL2A1A5D9 508 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 FAM205CA6NFA0 338 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 FAM163BP0C2L3 166 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 MTIF2P46199 727 aaKnown RBP17.59■□□□□ 0.41
C9orf3-206ENST00000428313 PDE6CP51160 858 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 PLS1Q14651 629 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 C1QTNF12Q5T7M4 302 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 TRIM68Q6AZZ1 485 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 ANKRD13DQ6ZTN6 518 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 COPS6Q7L5N1 327 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 ANKRD23Q86SG2 305 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 STAG2Q8N3U4 1231 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 GIMAP8Q8ND71 665 aaPredicted RBP17.59■□□□□ 0.41
C9orf3-206ENST00000428313 RAB3IPQ96QF0 476 aaPredicted RBP17.59■□□□□ 0.41
C9orf3-206ENST00000428313 SYT15Q9BQS2 421 aa17.59■□□□□ 0.41
C9orf3-206ENST00000428313 USP15Q9Y4E8 981 aaPredicted RBP17.59■□□□□ 0.41
C9orf3-206ENST00000428313 ADAMTS7Q9UKP4 1686 aa17.58■□□□□ 0.41
C9orf3-206ENST00000428313 EYA2O00167 538 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 O00370 1275 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 SP100P23497 879 aaPredicted RBP17.58■□□□□ 0.4
C9orf3-206ENST00000428313 PCK1P35558 622 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 TUBP50607 506 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 NAB2Q15742 525 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 SESTD1Q86VW0 696 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 ANKRD13CQ8N6S4 541 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 SEC14L1Q92503 715 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 PKD1L3Q7Z443 1732 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 TIAM2Q8IVF5 1701 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 A0A087WZG4 1122 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 RHOBTB3O94955 611 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 SLC1A4P43007 532 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 GNAQP50148 359 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 FOXO4P98177 505 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 TTC38Q5R3I4 469 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 ABTB2Q8N961 1025 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 KIFAP3Q92845 792 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 IFT43Q96FT9 208 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.58■□□□□ 0.4
C9orf3-206ENST00000428313 ADAM7Q9H2U9 754 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 SIK3Q9Y2K2 1263 aa17.58■□□□□ 0.4
C9orf3-206ENST00000428313 MAP3K13O43283 966 aa17.57■□□□□ 0.4
C9orf3-206ENST00000428313 CREB3O43889 395 aa17.57■□□□□ 0.4
C9orf3-206ENST00000428313 CALB2P22676 271 aa17.57■□□□□ 0.4
C9orf3-206ENST00000428313 ARHGAP27Q6ZUM4 889 aa17.57■□□□□ 0.4
C9orf3-206ENST00000428313 ACTRT1Q8TDG2 376 aa17.57■□□□□ 0.4
C9orf3-206ENST00000428313 KCNV2Q8TDN2 545 aa17.57■□□□□ 0.4
C9orf3-206ENST00000428313 TAF4BQ92750 862 aa17.57■□□□□ 0.4
C9orf3-206ENST00000428313 PHF20Q9BVI0 1012 aa17.57■□□□□ 0.4
C9orf3-206ENST00000428313 RNF26Q9BY78 433 aaPredicted RBP17.57■□□□□ 0.4
C9orf3-206ENST00000428313 EDEM3Q9BZQ6 932 aa17.57■□□□□ 0.4
C9orf3-206ENST00000428313 RNPEPL1Q9HAU8 725 aa17.57■□□□□ 0.4
C9orf3-206ENST00000428313 FAM114A2Q9NRY5 505 aa17.57■□□□□ 0.4
C9orf3-206ENST00000428313 INTS9Q9NV88 658 aaKnown RBP17.57■□□□□ 0.4
C9orf3-206ENST00000428313 PCDHGA4Q9Y5G9 962 aa17.57■□□□□ 0.4
C9orf3-206ENST00000428313 CCDC188H7C350 402 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 SUN1O94901 812 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 GSTA2P09210 222 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 NUDT17P0C025 328 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 CCNB1P14635 433 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 CCNE1P24864 410 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 PSMC4P43686 418 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 PTGDRQ13258 359 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 C1orf141Q5JVX7 400 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 MAIP1Q8WWC4 291 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 MTA3Q9BTC8 594 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 TXLNGYQ9BZA5 131 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 PCMTD2Q9NV79 361 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 STK38LQ9Y2H1 464 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 FTCDO95954 541 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 FLT3P36888 993 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 PPP1R2P41236 205 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 DHX9Q08211 1270 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms