RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 TROAPQ12815 778 aa20.36■□□□□ 0.85
HDAC7-208ENST00000425451 RNPEPQ9H4A4 650 aa20.36■□□□□ 0.85
HDAC7-208ENST00000425451 TAF6LQ9Y6J9 622 aa20.36■□□□□ 0.85
HDAC7-208ENST00000425451 BAZ2BQ9UIF8 2168 aaKnown RBP20.35■□□□□ 0.85
HDAC7-208ENST00000425451 FRMPD4Q14CM0 1322 aa20.35■□□□□ 0.85
HDAC7-208ENST00000425451 PNMA6FA0A0J9YX94 578 aa20.35■□□□□ 0.85
HDAC7-208ENST00000425451 AMHP03971 560 aa20.35■□□□□ 0.85
HDAC7-208ENST00000425451 CYP21A2P08686 494 aa20.35■□□□□ 0.85
HDAC7-208ENST00000425451 SMIM10L2AP0DMW4 78 aa20.35■□□□□ 0.85
HDAC7-208ENST00000425451 SMIM10L2BP0DMW5 78 aa20.35■□□□□ 0.85
HDAC7-208ENST00000425451 GSPT1P15170 499 aaKnown RBP20.35■□□□□ 0.85
HDAC7-208ENST00000425451 TRAF1Q13077 416 aa20.35■□□□□ 0.85
HDAC7-208ENST00000425451 SEMA3FQ13275 785 aa20.35■□□□□ 0.85
HDAC7-208ENST00000425451 MYOCDQ8IZQ8 938 aa20.35■□□□□ 0.85
HDAC7-208ENST00000425451 INPP4AQ96PE3 977 aaPredicted RBP20.35■□□□□ 0.85
HDAC7-208ENST00000425451 UBE2ZQ9H832 354 aaPredicted RBP20.35■□□□□ 0.85
HDAC7-208ENST00000425451 TELO2Q9Y4R8 837 aa20.35■□□□□ 0.85
HDAC7-208ENST00000425451 MICAL3Q7RTP6 2002 aa20.34■□□□□ 0.85
HDAC7-208ENST00000425451 SPATA31C2B4DYI2 1134 aa20.34■□□□□ 0.85
HDAC7-208ENST00000425451 IFIT3O14879 490 aaKnown RBP20.34■□□□□ 0.85
HDAC7-208ENST00000425451 PDE4AP27815 886 aa20.34■□□□□ 0.85
HDAC7-208ENST00000425451 ICAM3P32942 547 aa20.34■□□□□ 0.85
HDAC7-208ENST00000425451 PTH1RQ03431 593 aa20.34■□□□□ 0.85
HDAC7-208ENST00000425451 FBXO22Q8NEZ5 403 aa20.34■□□□□ 0.85
HDAC7-208ENST00000425451 C11orf16Q9NQ32 467 aa20.34■□□□□ 0.85
HDAC7-208ENST00000425451 TRDNQ13061 729 aa20.33■□□□□ 0.85
HDAC7-208ENST00000425451 METTL7BQ6UX53 244 aa20.33■□□□□ 0.85
HDAC7-208ENST00000425451 TOP1MTQ969P6 601 aa20.33■□□□□ 0.85
HDAC7-208ENST00000425451 FAM122AQ96E09 287 aa20.33■□□□□ 0.85
HDAC7-208ENST00000425451 GPR20Q99678 358 aa20.33■□□□□ 0.85
HDAC7-208ENST00000425451 USP26Q9BXU7 913 aa20.33■□□□□ 0.85
HDAC7-208ENST00000425451 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.32■□□□□ 0.84
HDAC7-208ENST00000425451 ADAM17P78536 824 aa20.32■□□□□ 0.84
HDAC7-208ENST00000425451 GNPTABQ3T906 1256 aa20.32■□□□□ 0.84
HDAC7-208ENST00000425451 LEXMQ3ZCV2 418 aa20.32■□□□□ 0.84
HDAC7-208ENST00000425451 TTC22Q5TAA0 569 aa20.32■□□□□ 0.84
HDAC7-208ENST00000425451 CYFIP1Q7L576 1253 aa20.32■□□□□ 0.84
HDAC7-208ENST00000425451 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.32■□□□□ 0.84
HDAC7-208ENST00000425451 SETD4Q9NVD3 440 aa20.32■□□□□ 0.84
HDAC7-208ENST00000425451 RTEL1Q9NZ71 1219 aa20.32■□□□□ 0.84
HDAC7-208ENST00000425451 U3KPZ7 1027 aaPredicted RBP20.32■□□□□ 0.84
HDAC7-208ENST00000425451 E7EWF7 191 aa20.31■□□□□ 0.84
HDAC7-208ENST00000425451 NOP56O00567 594 aaKnown RBP20.31■□□□□ 0.84
HDAC7-208ENST00000425451 CAND2O75155 1236 aa20.31■□□□□ 0.84
HDAC7-208ENST00000425451 STAM2O75886 525 aa20.31■□□□□ 0.84
HDAC7-208ENST00000425451 CTSHP09668 335 aa20.31■□□□□ 0.84
HDAC7-208ENST00000425451 ANTXR2P58335 489 aa20.31■□□□□ 0.84
HDAC7-208ENST00000425451 NEDD9Q14511 834 aa20.31■□□□□ 0.84
HDAC7-208ENST00000425451 WTAPQ15007 396 aa20.31■□□□□ 0.84
HDAC7-208ENST00000425451 EPC2Q52LR7 807 aa20.31■□□□□ 0.84
HDAC7-208ENST00000425451 TMEM31Q5JXX7 168 aa20.31■□□□□ 0.84
HDAC7-208ENST00000425451 TRIM50Q86XT4 487 aa20.31■□□□□ 0.84
HDAC7-208ENST00000425451 SEPT8Q92599 483 aa20.31■□□□□ 0.84
HDAC7-208ENST00000425451 MRPL38Q96DV4 380 aaKnown RBP20.31■□□□□ 0.84
HDAC7-208ENST00000425451 PI4K2BG5E9Z4 385 aa20.3■□□□□ 0.84
HDAC7-208ENST00000425451 FIBPO43427 364 aa20.3■□□□□ 0.84
HDAC7-208ENST00000425451 GPR37L1O60883 481 aa20.3■□□□□ 0.84
HDAC7-208ENST00000425451 KCNA5P22460 613 aa20.3■□□□□ 0.84
HDAC7-208ENST00000425451 FAM178BQ8IXR5 827 aa20.3■□□□□ 0.84
HDAC7-208ENST00000425451 IGDCC4Q8TDY8 1250 aa20.3■□□□□ 0.84
HDAC7-208ENST00000425451 PIBF1Q8WXW3 757 aa20.3■□□□□ 0.84
HDAC7-208ENST00000425451 DOCK5Q9H7D0 1870 aa20.3■□□□□ 0.84
HDAC7-208ENST00000425451 ERICH2A1L162 156 aa20.29■□□□□ 0.84
HDAC7-208ENST00000425451 H3BNC9 293 aa20.29■□□□□ 0.84
HDAC7-208ENST00000425451 UPP2O95045 317 aa20.29■□□□□ 0.84
HDAC7-208ENST00000425451 CHMLP26374 656 aa20.29■□□□□ 0.84
HDAC7-208ENST00000425451 FAM26DQ5JW98 314 aa20.29■□□□□ 0.84
HDAC7-208ENST00000425451 USP17L6PQ6QN14 398 aa20.29■□□□□ 0.84
HDAC7-208ENST00000425451 NCOA7Q8NI08 942 aa20.29■□□□□ 0.84
HDAC7-208ENST00000425451 SAMD11Q96NU1 681 aa20.29■□□□□ 0.84
HDAC7-208ENST00000425451 ARIH1Q9Y4X5 557 aaPredicted RBP20.29■□□□□ 0.84
HDAC7-208ENST00000425451 COL4A6Q14031 1691 aa20.29■□□□□ 0.84
HDAC7-208ENST00000425451 MEIS2O14770 477 aa20.28■□□□□ 0.84
HDAC7-208ENST00000425451 GNAT1P11488 350 aa20.28■□□□□ 0.84
HDAC7-208ENST00000425451 IL9P15248 144 aa20.28■□□□□ 0.84
HDAC7-208ENST00000425451 PCNX4Q63HM2 1172 aa20.28■□□□□ 0.84
HDAC7-208ENST00000425451 RALYLQ86SE5 291 aaKnown RBP20.28■□□□□ 0.84
HDAC7-208ENST00000425451 NEK9Q8TD19 979 aa20.28■□□□□ 0.84
HDAC7-208ENST00000425451 LMBR1Q8WVP7 490 aa20.28■□□□□ 0.84
HDAC7-208ENST00000425451 YME1L1Q96TA2 773 aa20.28■□□□□ 0.84
HDAC7-208ENST00000425451 SENP7Q9BQF6 1050 aa20.28■□□□□ 0.84
HDAC7-208ENST00000425451 SUPT16HQ9Y5B9 1047 aaKnown RBP20.28■□□□□ 0.84
HDAC7-208ENST00000425451 FAM86C2PA6NEL3 165 aa20.27■□□□□ 0.84
HDAC7-208ENST00000425451 CHRNA1P02708 482 aa20.27■□□□□ 0.84
HDAC7-208ENST00000425451 SART3Q15020 963 aaKnown RBP20.27■□□□□ 0.84
HDAC7-208ENST00000425451 PTPROQ16827 1216 aa20.27■□□□□ 0.84
HDAC7-208ENST00000425451 UTP14CQ5TAP6 766 aaKnown RBP20.27■□□□□ 0.84
HDAC7-208ENST00000425451 CATIPQ7Z7H3 387 aa20.27■□□□□ 0.84
HDAC7-208ENST00000425451 TMEM192Q8IY95 271 aa20.27■□□□□ 0.84
HDAC7-208ENST00000425451 MB21D2Q8IYB1 491 aaPredicted RBP20.27■□□□□ 0.84
HDAC7-208ENST00000425451 RUFY2Q8WXA3 655 aa20.27■□□□□ 0.84
HDAC7-208ENST00000425451 GRXCR2A6NFK2 248 aa20.26■□□□□ 0.83
HDAC7-208ENST00000425451 PIK3CDO00329 1044 aa20.26■□□□□ 0.83
HDAC7-208ENST00000425451 ARHGAP4P98171 946 aa20.26■□□□□ 0.83
HDAC7-208ENST00000425451 GPM6BQ13491 265 aa20.26■□□□□ 0.83
HDAC7-208ENST00000425451 COL19A1Q14993 1142 aa20.26■□□□□ 0.83
HDAC7-208ENST00000425451 PTCRAQ6ISU1 281 aaPredicted RBP20.26■□□□□ 0.83
HDAC7-208ENST00000425451 XRRA1Q6P2D8 792 aa20.26■□□□□ 0.83
HDAC7-208ENST00000425451 GJD3Q8N144 294 aa20.26■□□□□ 0.83
HDAC7-208ENST00000425451 BANK1Q8NDB2 785 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms