RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 TLL1O43897 1013 aa14.98□□□□□ -0.01
VRK3-203ENST00000424804 GJB5O95377 273 aa14.98□□□□□ -0.01
VRK3-203ENST00000424804 LGALS2P05162 132 aa14.98□□□□□ -0.01
VRK3-203ENST00000424804 ADAM17P78536 824 aa14.98□□□□□ -0.01
VRK3-203ENST00000424804 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.98□□□□□ -0.01
VRK3-203ENST00000424804 MICALL1Q8N3F8 863 aa14.98□□□□□ -0.01
VRK3-203ENST00000424804 SRBD1Q8N5C6 995 aaKnown RBP14.98□□□□□ -0.01
VRK3-203ENST00000424804 NECAB3Q96P71 396 aaPredicted RBP14.98□□□□□ -0.01
VRK3-203ENST00000424804 MYL10Q9BUA6 226 aa14.98□□□□□ -0.01
VRK3-203ENST00000424804 SPZ1Q9BXG8 430 aa14.98□□□□□ -0.01
VRK3-203ENST00000424804 RNPEPQ9H4A4 650 aa14.98□□□□□ -0.01
VRK3-203ENST00000424804 SIP14410 1827 aa14.97□□□□□ -0.01
VRK3-203ENST00000424804 KIF28PB7ZC32 967 aa14.97□□□□□ -0.01
VRK3-203ENST00000424804 H3BRB1 525 aa14.97□□□□□ -0.01
VRK3-203ENST00000424804 TREHO43280 583 aa14.97□□□□□ -0.01
VRK3-203ENST00000424804 PLEKHA8P1O95397 391 aa14.97□□□□□ -0.01
VRK3-203ENST00000424804 SMARCA1P28370 1054 aa14.97□□□□□ -0.01
VRK3-203ENST00000424804 KCNQ1P51787 676 aa14.97□□□□□ -0.01
VRK3-203ENST00000424804 RNF20Q5VTR2 975 aa14.97□□□□□ -0.01
VRK3-203ENST00000424804 USP17L6PQ6QN14 398 aa14.97□□□□□ -0.01
VRK3-203ENST00000424804 ZNF654Q8IZM8 581 aa14.97□□□□□ -0.01
VRK3-203ENST00000424804 DBF4BQ8NFT6 615 aa14.97□□□□□ -0.01
VRK3-203ENST00000424804 PIBF1Q8WXW3 757 aa14.97□□□□□ -0.01
VRK3-203ENST00000424804 GPR20Q99678 358 aa14.97□□□□□ -0.01
VRK3-203ENST00000424804 TUT1Q9H6E5 874 aaKnown RBP14.97□□□□□ -0.01
VRK3-203ENST00000424804 RTEL1Q9NZ71 1219 aa14.97□□□□□ -0.01
VRK3-203ENST00000424804 LINC01553A4QN01 128 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 PIK3CDO00329 1044 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 SH2B2O14492 632 aaPredicted RBP14.96□□□□□ -0.01
VRK3-203ENST00000424804 PRC1O43663 620 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 LGR5O75473 907 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 SMIM10L2AP0DMW4 78 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 SMIM10L2BP0DMW5 78 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 KCNJ6P48051 423 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 ERVK-21P61565 698 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 TRAF1Q13077 416 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 NECTIN1Q15223 517 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 PLEKHG4Q58EX7 1191 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 METTL7BQ6UX53 244 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 NFXL1Q6ZNB6 911 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 CYFIP1Q7L576 1253 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 CATIPQ7Z7H3 387 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 UHRF1Q96T88 793 aaPredicted RBP14.96□□□□□ -0.01
VRK3-203ENST00000424804 RAD9AQ99638 391 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 MTA3Q9BTC8 594 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 SUGCTQ9HAC7 445 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 MLXIPQ9HAP2 919 aa14.96□□□□□ -0.01
VRK3-203ENST00000424804 C17orf102A2RUQ5 167 aa14.95□□□□□ -0.02
VRK3-203ENST00000424804 RSPH10B2B2RC85 870 aa14.95□□□□□ -0.02
VRK3-203ENST00000424804 ATP9AO75110 1047 aa14.95□□□□□ -0.02
VRK3-203ENST00000424804 STAM2O75886 525 aa14.95□□□□□ -0.02
VRK3-203ENST00000424804 DDAH1O94760 285 aa14.95□□□□□ -0.02
VRK3-203ENST00000424804 RSPH10BP0C881 870 aa14.95□□□□□ -0.02
VRK3-203ENST00000424804 MCM5P33992 734 aa14.95□□□□□ -0.02
VRK3-203ENST00000424804 HTRA4P83105 476 aaPredicted RBP14.95□□□□□ -0.02
VRK3-203ENST00000424804 IKBKEQ14164 716 aa14.95□□□□□ -0.02
VRK3-203ENST00000424804 PCNX4Q63HM2 1172 aa14.95□□□□□ -0.02
VRK3-203ENST00000424804 TRIM50Q86XT4 487 aa14.95□□□□□ -0.02
VRK3-203ENST00000424804 CMTR1Q8N1G2 835 aaKnown RBP14.95□□□□□ -0.02
VRK3-203ENST00000424804 LRRC2Q9BYS8 371 aa14.95□□□□□ -0.02
VRK3-203ENST00000424804 KAT6AQ92794 2004 aa14.95□□□□□ -0.02
VRK3-203ENST00000424804 CCDC69A6NI79 296 aa14.94□□□□□ -0.02
VRK3-203ENST00000424804 FIBPO43427 364 aa14.94□□□□□ -0.02
VRK3-203ENST00000424804 THPOP40225 353 aa14.94□□□□□ -0.02
VRK3-203ENST00000424804 NEDD9Q14511 834 aa14.94□□□□□ -0.02
VRK3-203ENST00000424804 FAM26DQ5JW98 314 aa14.94□□□□□ -0.02
VRK3-203ENST00000424804 RAB11FIP4Q86YS3 637 aa14.94□□□□□ -0.02
VRK3-203ENST00000424804 SP7Q8TDD2 431 aaPredicted RBP14.94□□□□□ -0.02
VRK3-203ENST00000424804 GDPD5Q8WTR4 605 aa14.94□□□□□ -0.02
VRK3-203ENST00000424804 ATP6V0A1Q93050 837 aa14.94□□□□□ -0.02
VRK3-203ENST00000424804 SENP7Q9BQF6 1050 aa14.94□□□□□ -0.02
VRK3-203ENST00000424804 USP26Q9BXU7 913 aa14.94□□□□□ -0.02
VRK3-203ENST00000424804 SETD4Q9NVD3 440 aa14.94□□□□□ -0.02
VRK3-203ENST00000424804 LMCD1Q9NZU5 365 aa14.94□□□□□ -0.02
VRK3-203ENST00000424804 MYO7AQ13402 2215 aa14.93□□□□□ -0.02
VRK3-203ENST00000424804 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.93□□□□□ -0.02
VRK3-203ENST00000424804 GTPBP6O43824 516 aaPredicted RBP14.93□□□□□ -0.02
VRK3-203ENST00000424804 EFCAB14O75071 495 aa14.93□□□□□ -0.02
VRK3-203ENST00000424804 KCNA2P16389 499 aa14.93□□□□□ -0.02
VRK3-203ENST00000424804 ITGB5P18084 799 aa14.93□□□□□ -0.02
VRK3-203ENST00000424804 RXRAP19793 462 aa14.93□□□□□ -0.02
VRK3-203ENST00000424804 LIFRP42702 1097 aa14.93□□□□□ -0.02
VRK3-203ENST00000424804 GNPTABQ3T906 1256 aa14.93□□□□□ -0.02
VRK3-203ENST00000424804 FAM117BQ6P1L5 589 aa14.93□□□□□ -0.02
VRK3-203ENST00000424804 RRP36Q96EU6 259 aaKnown RBP14.93□□□□□ -0.02
VRK3-203ENST00000424804 NEK1Q96PY6 1258 aa14.93□□□□□ -0.02
VRK3-203ENST00000424804 COG5Q9UP83 839 aa14.93□□□□□ -0.02
VRK3-203ENST00000424804 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.92□□□□□ -0.02
VRK3-203ENST00000424804 GSTTP1A0A1W2PQM5 241 aa14.92□□□□□ -0.02
VRK3-203ENST00000424804 hCG_1642624A0A1W2PR95 340 aa14.92□□□□□ -0.02
VRK3-203ENST00000424804 XRRA1Q6P2D8 792 aa14.92□□□□□ -0.02
VRK3-203ENST00000424804 RASEFQ8IZ41 740 aa14.92□□□□□ -0.02
VRK3-203ENST00000424804 TCEANC2Q96MN5 208 aa14.92□□□□□ -0.02
VRK3-203ENST00000424804 TGS1Q96RS0 853 aaKnown RBP14.92□□□□□ -0.02
VRK3-203ENST00000424804 LZTS2Q9BRK4 669 aa14.92□□□□□ -0.02
VRK3-203ENST00000424804 C17orf80Q9BSJ5 609 aa14.92□□□□□ -0.02
VRK3-203ENST00000424804 ZBED2Q9BTP6 218 aa14.92□□□□□ -0.02
VRK3-203ENST00000424804 TSPYL2Q9H2G4 693 aaPredicted RBP14.92□□□□□ -0.02
VRK3-203ENST00000424804 UBIAD1Q9Y5Z9 338 aa14.92□□□□□ -0.02
VRK3-203ENST00000424804 EMSYQ7Z589 1322 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms