RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 OSBPL7Q9BZF2 842 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 RNPEPQ9H4A4 650 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 TUT1Q9H6E5 874 aaKnown RBP19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 MYO7AQ13402 2215 aa19.5■□□□□ 0.71
CHCHD3-202ENST00000423635 IQCA1Q86XH1 822 aa19.5■□□□□ 0.71
CHCHD3-202ENST00000423635 POP1Q99575 1024 aaKnown RBP19.5■□□□□ 0.71
CHCHD3-202ENST00000423635 AMNQ9BXJ7 453 aa19.5■□□□□ 0.71
CHCHD3-202ENST00000423635 LMAN2LQ9H0V9 348 aa19.5■□□□□ 0.71
CHCHD3-202ENST00000423635 KAT14Q9H8E8 782 aa19.5■□□□□ 0.71
CHCHD3-202ENST00000423635 VAT1LQ9HCJ6 419 aa19.5■□□□□ 0.71
CHCHD3-202ENST00000423635 C5orf42Q9H799 3197 aa19.49■□□□□ 0.71
CHCHD3-202ENST00000423635 NEDD4P46934 1319 aa19.49■□□□□ 0.71
CHCHD3-202ENST00000423635 LINC00271P0C7V0 271 aa19.49■□□□□ 0.71
CHCHD3-202ENST00000423635 SMIM10L2AP0DMW4 78 aa19.49■□□□□ 0.71
CHCHD3-202ENST00000423635 SMIM10L2BP0DMW5 78 aa19.49■□□□□ 0.71
CHCHD3-202ENST00000423635 MYCLP12524 364 aaPredicted RBP19.49■□□□□ 0.71
CHCHD3-202ENST00000423635 UBA1P22314 1058 aaKnown RBP19.49■□□□□ 0.71
CHCHD3-202ENST00000423635 PDE1AP54750 535 aa19.49■□□□□ 0.71
CHCHD3-202ENST00000423635 PGM5Q15124 567 aa19.49■□□□□ 0.71
CHCHD3-202ENST00000423635 IL17RAQ96F46 866 aa19.49■□□□□ 0.71
CHCHD3-202ENST00000423635 IFIH1Q9BYX4 1025 aaKnown RBP19.49■□□□□ 0.71
CHCHD3-202ENST00000423635 MLXIPQ9HAP2 919 aa19.49■□□□□ 0.71
CHCHD3-202ENST00000423635 CCDC171Q6TFL3 1326 aa19.48■□□□□ 0.71
CHCHD3-202ENST00000423635 ZNF213O14771 459 aa19.48■□□□□ 0.71
CHCHD3-202ENST00000423635 MBTPS2O43462 519 aa19.48■□□□□ 0.71
CHCHD3-202ENST00000423635 PARP1P09874 1014 aaKnown RBP19.48■□□□□ 0.71
CHCHD3-202ENST00000423635 BMPR1AP36894 532 aa19.48■□□□□ 0.71
CHCHD3-202ENST00000423635 DLX2Q07687 328 aaPredicted RBP19.48■□□□□ 0.71
CHCHD3-202ENST00000423635 NMIQ13287 307 aaPredicted RBP19.48■□□□□ 0.71
CHCHD3-202ENST00000423635 FAM26DQ5JW98 314 aa19.48■□□□□ 0.71
CHCHD3-202ENST00000423635 BMP8AQ7Z5Y6 402 aa19.48■□□□□ 0.71
CHCHD3-202ENST00000423635 FIBCD1Q8N539 461 aa19.48■□□□□ 0.71
CHCHD3-202ENST00000423635 DHX16O60231 1041 aaKnown RBP19.47■□□□□ 0.71
CHCHD3-202ENST00000423635 SORBS3O60504 671 aa19.47■□□□□ 0.71
CHCHD3-202ENST00000423635 KDM4AO75164 1064 aa19.47■□□□□ 0.71
CHCHD3-202ENST00000423635 LGALS2P05162 132 aa19.47■□□□□ 0.71
CHCHD3-202ENST00000423635 GNAT1P11488 350 aa19.47■□□□□ 0.71
CHCHD3-202ENST00000423635 HYAL1Q12794 435 aa19.47■□□□□ 0.71
CHCHD3-202ENST00000423635 RALGAPA2Q2PPJ7 1873 aa19.47■□□□□ 0.71
CHCHD3-202ENST00000423635 NLRC5Q86WI3 1866 aa19.47■□□□□ 0.71
CHCHD3-202ENST00000423635 EDAQ92838 391 aa19.47■□□□□ 0.71
CHCHD3-202ENST00000423635 MTMR8Q96EF0 704 aa19.47■□□□□ 0.71
CHCHD3-202ENST00000423635 ZSCAN10Q96SZ4 725 aaPredicted RBP19.47■□□□□ 0.71
CHCHD3-202ENST00000423635 C11orf84Q9BUA3 381 aaPredicted RBP19.47■□□□□ 0.71
CHCHD3-202ENST00000423635 USP26Q9BXU7 913 aa19.47■□□□□ 0.71
CHCHD3-202ENST00000423635 MUTYHQ9UIF7 546 aa19.47■□□□□ 0.71
CHCHD3-202ENST00000423635 RWDD3Q9Y3V2 267 aa19.47■□□□□ 0.71
CHCHD3-202ENST00000423635 GRM6O15303 877 aa19.46■□□□□ 0.71
CHCHD3-202ENST00000423635 ADAM17P78536 824 aa19.46■□□□□ 0.71
CHCHD3-202ENST00000423635 ANKRD45Q5TZF3 282 aa19.46■□□□□ 0.71
CHCHD3-202ENST00000423635 RNF135Q8IUD6 432 aa19.46■□□□□ 0.71
CHCHD3-202ENST00000423635 ENAHQ8N8S7 591 aaPredicted RBP19.46■□□□□ 0.71
CHCHD3-202ENST00000423635 GPKOWQ92917 476 aaPredicted RBP eCLIP19.46■□□□□ 0.71
CHCHD3-202ENST00000423635 CLP1Q92989 425 aaKnown RBP19.46■□□□□ 0.71
CHCHD3-202ENST00000423635 SNX27Q96L92 541 aa19.46■□□□□ 0.71
CHCHD3-202ENST00000423635 ZSWIM5Q9P217 1185 aa19.46■□□□□ 0.71
CHCHD3-202ENST00000423635 PPP1R11O60927 126 aaPredicted RBP19.45■□□□□ 0.7
CHCHD3-202ENST00000423635 CTSHP09668 335 aa19.45■□□□□ 0.7
CHCHD3-202ENST00000423635 CTNNB1P35222 781 aa19.45■□□□□ 0.7
CHCHD3-202ENST00000423635 MFAP1P55081 439 aaKnown RBP19.45■□□□□ 0.7
CHCHD3-202ENST00000423635 SMAD4Q13485 552 aaKnown RBP19.45■□□□□ 0.7
CHCHD3-202ENST00000423635 IL31RAQ8NI17 732 aa19.45■□□□□ 0.7
CHCHD3-202ENST00000423635 BCAS3Q9H6U6 928 aa19.45■□□□□ 0.7
CHCHD3-202ENST00000423635 RC3H2Q9HBD1 1191 aaKnown RBP19.45■□□□□ 0.7
CHCHD3-202ENST00000423635 SETD4Q9NVD3 440 aa19.45■□□□□ 0.7
CHCHD3-202ENST00000423635 ZBTB47Q9UFB7 747 aaPredicted RBP19.45■□□□□ 0.7
CHCHD3-202ENST00000423635 PCDHA1Q9Y5I3 950 aa19.45■□□□□ 0.7
CHCHD3-202ENST00000423635 MYH6P13533 1939 aa19.45■□□□□ 0.7
CHCHD3-202ENST00000423635 TECTAO75443 2155 aa19.44■□□□□ 0.7
CHCHD3-202ENST00000423635 CCND2P30279 289 aa19.44■□□□□ 0.7
CHCHD3-202ENST00000423635 ADAM15Q13444 863 aa19.44■□□□□ 0.7
CHCHD3-202ENST00000423635 STAG2Q8N3U4 1231 aa19.44■□□□□ 0.7
CHCHD3-202ENST00000423635 STXBP3O00186 592 aa19.43■□□□□ 0.7
CHCHD3-202ENST00000423635 ZBTB5O15062 677 aa19.43■□□□□ 0.7
CHCHD3-202ENST00000423635 HOXA13P31271 388 aaPredicted RBP19.43■□□□□ 0.7
CHCHD3-202ENST00000423635 ICAM3P32942 547 aa19.43■□□□□ 0.7
CHCHD3-202ENST00000423635 CLUL1Q15846 466 aa19.43■□□□□ 0.7
CHCHD3-202ENST00000423635 PKN1Q16512 942 aa19.43■□□□□ 0.7
CHCHD3-202ENST00000423635 ZNF689Q96CS4 500 aaPredicted RBP19.43■□□□□ 0.7
CHCHD3-202ENST00000423635 EHMT1Q9H9B1 1298 aa19.43■□□□□ 0.7
CHCHD3-202ENST00000423635 CD207Q9UJ71 328 aa19.43■□□□□ 0.7
CHCHD3-202ENST00000423635 USP34Q70CQ2 3546 aa19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 TRIM6-TRIM34B2RNG4 842 aa19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 B4E1Z4 1266 aa19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 KLRF2D3W0D1 207 aa19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 NOP56O00567 594 aaKnown RBP19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 TBX10O75333 385 aa19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 EYA4O95677 639 aa19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 CHRNA1P02708 482 aa19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 MMP1P03956 469 aa19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 GTF2F1P35269 517 aaKnown RBP eCLIP19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 CAMK1Q14012 370 aa19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 NEDD9Q14511 834 aa19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 METTL7BQ6UX53 244 aa19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 PRSS33Q8NF86 280 aa19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 ZFP91Q96JP5 570 aaPredicted RBP19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 MSLNLQ96KJ4 702 aa19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 PHOX2BQ99453 314 aa19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 GPR20Q99678 358 aa19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 PRRX2Q99811 253 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms