RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 MYO9BQ13459 2157 aa9.46□□□□□ -0.9
TRIM43CP-201ENST00000422468 CCDC69A6NI79 296 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 GRXCR1A8MXD5 290 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 CALM1P0DP23 149 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 CALM2P0DP24 149 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 CALM3P0DP25 149 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 TGFB3P10600 412 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 FOSL2P15408 326 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 PBX2P40425 430 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 GNAQP50148 359 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 RAB30Q15771 203 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 PTGISQ16647 500 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 CELF3Q5SZQ8 465 aaKnown RBP9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 MYSM1Q5VVJ2 828 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 TYW1BQ6NUM6 668 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 NFXL1Q6ZNB6 911 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 FCHSD1Q86WN1 690 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 SRBD1Q8N5C6 995 aaKnown RBP9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 CCDC155Q8N6L0 562 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 RETREG2Q8NC44 543 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 IL31RAQ8NI17 732 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 PIBF1Q8WXW3 757 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 KAT2BQ92831 832 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 VWCEQ96DN2 955 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 KIF2CQ99661 725 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 PBX4Q9BYU1 374 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 ZNF576Q9H609 170 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 CXXC1Q9P0U4 656 aaPredicted RBP9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 SEC63Q9UGP8 760 aaKnown RBP9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 MSRAQ9UJ68 235 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 NOD1Q9Y239 953 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 FRMPD4Q14CM0 1322 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 REV3LO60673 3130 aa9.45□□□□□ -0.9
TRIM43CP-201ENST00000422468 TET1Q8NFU7 2136 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 hCG_1642624A0A1W2PR95 340 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 PPFIA4O75335 1185 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 STAM2O75886 525 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 GGPS1O95749 300 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 F2P00734 622 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 IQCF3P0C7M6 154 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 HOXD8P13378 290 aaPredicted RBP9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 CDC27P30260 824 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 PSEN2P49810 448 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 ST3GAL1Q11201 340 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 BFSP2Q13515 415 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 TOB2Q14106 344 aaPredicted RBP9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 GRIN2CQ14957 1233 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 NFKBIBQ15653 356 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 RNF20Q5VTR2 975 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 GDF6Q6KF10 455 aaPredicted RBP9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 POTEGQ6S5H5 508 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 TMEM92Q6UXU6 159 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 DEFB128Q7Z7B8 93 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 C7orf31Q8N865 590 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 MAFAQ8NHW3 353 aaPredicted RBP9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 SPATA33Q96N06 139 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 CTAGE1Q96RT6 745 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 KATNAL1Q9BW62 490 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 AGXT2Q9BYV1 514 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 TELO2Q9Y4R8 837 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 ARIH1Q9Y4X5 557 aaPredicted RBP9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 SLC12A7Q9Y666 1083 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 SLC4A7Q9Y6M7 1214 aa9.44□□□□□ -0.9
TRIM43CP-201ENST00000422468 SPATA31C2B4DYI2 1134 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 HAS3O00219 553 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 PIK3CDO00329 1044 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 DLL1O00548 723 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 ZNF286BP0CG31 522 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 ACTN1P12814 892 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 UBA1P22314 1058 aaKnown RBP9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 ICAM3P32942 547 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 MRPS9P82933 396 aaKnown RBP9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 SP2Q02086 613 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 BECN1Q14457 450 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 KIAA0753Q2KHM9 967 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 HSDL1Q3SXM5 330 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 GNPTABQ3T906 1256 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 XRRA1Q6P2D8 792 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 SGMS1Q86VZ5 419 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 SMARCC2Q8TAQ2 1214 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 CAGE1Q8TC20 777 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 AFAP1L1Q8TED9 768 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 CUL5Q93034 780 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 IL17RAQ96F46 866 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 INPP4AQ96PE3 977 aaPredicted RBP9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 HDAC6Q9UBN7 1215 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 GTF2IRD1Q9UHL9 959 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 KAT6AQ92794 2004 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 PTPRSQ13332 1948 aa9.43□□□□□ -0.9
TRIM43CP-201ENST00000422468 CNTNAP5Q8WYK1 1306 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 ZBBXA8MT70 800 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 MEIS2O14770 477 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 FIBPO43427 364 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 EDIL3O43854 480 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 SORBS3O60504 671 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 PPFIA3O75145 1194 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 LARGE1O95461 756 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 SELPP16109 830 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms