RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 GPR20Q99678 358 aa18.87■□□□□ 0.61
LINC00404-201ENST00000418660 H3BRB1 525 aa18.86■□□□□ 0.61
LINC00404-201ENST00000418660 MAFGO15525 162 aa18.86■□□□□ 0.61
LINC00404-201ENST00000418660 PRPF3O43395 683 aaKnown RBP18.86■□□□□ 0.61
LINC00404-201ENST00000418660 LGALS2P05162 132 aa18.86■□□□□ 0.61
LINC00404-201ENST00000418660 SCG2P13521 617 aa18.86■□□□□ 0.61
LINC00404-201ENST00000418660 PDIA3P30101 505 aaKnown RBP18.86■□□□□ 0.61
LINC00404-201ENST00000418660 OTOP2Q7RTS6 562 aa18.86■□□□□ 0.61
LINC00404-201ENST00000418660 TUT1Q9H6E5 874 aaKnown RBP18.86■□□□□ 0.61
LINC00404-201ENST00000418660 JADE2Q9NQC1 790 aa18.86■□□□□ 0.61
LINC00404-201ENST00000418660 TMEM265A0A087WTH1 108 aa18.85■□□□□ 0.61
LINC00404-201ENST00000418660 ATP9AO75110 1047 aa18.85■□□□□ 0.61
LINC00404-201ENST00000418660 KCNA2P16389 499 aa18.85■□□□□ 0.61
LINC00404-201ENST00000418660 CLK2P49760 499 aaKnown RBP18.85■□□□□ 0.61
LINC00404-201ENST00000418660 AP3B2Q13367 1082 aa18.85■□□□□ 0.61
LINC00404-201ENST00000418660 MTMR1Q13613 665 aa18.85■□□□□ 0.61
LINC00404-201ENST00000418660 TOB2Q14106 344 aaPredicted RBP18.85■□□□□ 0.61
LINC00404-201ENST00000418660 NTRK3Q16288 839 aa18.85■□□□□ 0.61
LINC00404-201ENST00000418660 AFAP1L1Q8TED9 768 aa18.85■□□□□ 0.61
LINC00404-201ENST00000418660 FAM161BQ96MY7 647 aa18.85■□□□□ 0.61
LINC00404-201ENST00000418660 SEMA6BQ9H3T3 888 aa18.85■□□□□ 0.61
LINC00404-201ENST00000418660 CXXC1Q9P0U4 656 aaPredicted RBP18.85■□□□□ 0.61
LINC00404-201ENST00000418660 STXBP5LQ9Y2K9 1186 aa18.85■□□□□ 0.61
LINC00404-201ENST00000418660 ESYT2A0FGR8 921 aa18.84■□□□□ 0.61
LINC00404-201ENST00000418660 AKAP17AQ02040 695 aaKnown RBP18.84■□□□□ 0.61
LINC00404-201ENST00000418660 RBL2Q08999 1139 aa18.84■□□□□ 0.61
LINC00404-201ENST00000418660 PTK7Q13308 1070 aa18.84■□□□□ 0.61
LINC00404-201ENST00000418660 PKN1Q16512 942 aa18.84■□□□□ 0.61
LINC00404-201ENST00000418660 DEFB128Q7Z7B8 93 aa18.84■□□□□ 0.61
LINC00404-201ENST00000418660 CCDC12Q8WUD4 166 aaPredicted RBP18.84■□□□□ 0.61
LINC00404-201ENST00000418660 DHX38Q92620 1227 aaKnown RBP18.84■□□□□ 0.61
LINC00404-201ENST00000418660 PGBD1Q96JS3 809 aa18.84■□□□□ 0.61
LINC00404-201ENST00000418660 GUCD1Q96NT3 240 aa18.84■□□□□ 0.61
LINC00404-201ENST00000418660 MXRA8Q9BRK3 442 aa18.84■□□□□ 0.61
LINC00404-201ENST00000418660 RNF26Q9BY78 433 aaPredicted RBP18.84■□□□□ 0.61
LINC00404-201ENST00000418660 ANO3Q9BYT9 981 aa18.84■□□□□ 0.61
LINC00404-201ENST00000418660 SELPP16109 830 aa18.83■□□□□ 0.6
LINC00404-201ENST00000418660 IFNAR1P17181 557 aa18.83■□□□□ 0.6
LINC00404-201ENST00000418660 DNAJB2P25686 324 aa18.83■□□□□ 0.6
LINC00404-201ENST00000418660 CCT2P78371 535 aaKnown RBP18.83■□□□□ 0.6
LINC00404-201ENST00000418660 SP4Q02446 784 aa18.83■□□□□ 0.6
LINC00404-201ENST00000418660 HIC1Q14526 733 aa18.83■□□□□ 0.6
LINC00404-201ENST00000418660 MCTP2Q6DN12 878 aa18.83■□□□□ 0.6
LINC00404-201ENST00000418660 PHKBQ93100 1093 aa18.83■□□□□ 0.6
LINC00404-201ENST00000418660 ZNF274Q96GC6 653 aaPredicted RBP18.83■□□□□ 0.6
LINC00404-201ENST00000418660 UPF3BQ9BZI7 483 aaKnown RBP18.83■□□□□ 0.6
LINC00404-201ENST00000418660 ZMYND12Q9H0C1 365 aa18.83■□□□□ 0.6
LINC00404-201ENST00000418660 TTYH1Q9H313 450 aaPredicted RBP18.83■□□□□ 0.6
LINC00404-201ENST00000418660 C6orf50Q9HD87 102 aa18.83■□□□□ 0.6
LINC00404-201ENST00000418660 TMEM260Q9NX78 707 aa18.83■□□□□ 0.6
LINC00404-201ENST00000418660 TELO2Q9Y4R8 837 aa18.83■□□□□ 0.6
LINC00404-201ENST00000418660 C17orf102A2RUQ5 167 aa18.82■□□□□ 0.6
LINC00404-201ENST00000418660 GRXCR1A8MXD5 290 aa18.82■□□□□ 0.6
LINC00404-201ENST00000418660 PARNO95453 639 aaKnown RBP18.82■□□□□ 0.6
LINC00404-201ENST00000418660 SMIM10L2AP0DMW4 78 aa18.82■□□□□ 0.6
LINC00404-201ENST00000418660 SMIM10L2BP0DMW5 78 aa18.82■□□□□ 0.6
LINC00404-201ENST00000418660 CKBP12277 381 aa18.82■□□□□ 0.6
LINC00404-201ENST00000418660 ACTN1P12814 892 aa18.82■□□□□ 0.6
LINC00404-201ENST00000418660 HOXC8P31273 242 aa18.82■□□□□ 0.6
LINC00404-201ENST00000418660 SREBF1P36956 1147 aa18.82■□□□□ 0.6
LINC00404-201ENST00000418660 ZNF200P98182 395 aaPredicted RBP18.82■□□□□ 0.6
LINC00404-201ENST00000418660 UTP14CQ5TAP6 766 aaKnown RBP18.82■□□□□ 0.6
LINC00404-201ENST00000418660 LRRC8DQ7L1W4 858 aa18.82■□□□□ 0.6
LINC00404-201ENST00000418660 NCOA5Q9HCD5 579 aaKnown RBP18.82■□□□□ 0.6
LINC00404-201ENST00000418660 KCNH7Q9NS40 1196 aa18.82■□□□□ 0.6
LINC00404-201ENST00000418660 PDRG1Q9NUG6 133 aa18.82■□□□□ 0.6
LINC00404-201ENST00000418660 ZNF215Q9UL58 517 aaPredicted RBP18.82■□□□□ 0.6
LINC00404-201ENST00000418660 SLC4A7Q9Y6M7 1214 aa18.82■□□□□ 0.6
LINC00404-201ENST00000418660 GNA11P29992 359 aa18.81■□□□□ 0.6
LINC00404-201ENST00000418660 TCF7P36402 384 aaPredicted RBP18.81■□□□□ 0.6
LINC00404-201ENST00000418660 TRIM71Q2Q1W2 868 aaKnown RBP18.81■□□□□ 0.6
LINC00404-201ENST00000418660 CEP55Q53EZ4 464 aa18.81■□□□□ 0.6
LINC00404-201ENST00000418660 JAKMIP3Q5VZ66 844 aa18.81■□□□□ 0.6
LINC00404-201ENST00000418660 CYP2W1Q8TAV3 490 aa18.81■□□□□ 0.6
LINC00404-201ENST00000418660 SEPT1Q8WYJ6 367 aa18.81■□□□□ 0.6
LINC00404-201ENST00000418660 TIFAQ96CG3 184 aa18.81■□□□□ 0.6
LINC00404-201ENST00000418660 SLC26A6Q9BXS9 759 aa18.81■□□□□ 0.6
LINC00404-201ENST00000418660 PBX4Q9BYU1 374 aa18.81■□□□□ 0.6
LINC00404-201ENST00000418660 FTOQ9C0B1 505 aaKnown RBP eCLIP18.81■□□□□ 0.6
LINC00404-201ENST00000418660 RNPEPQ9H4A4 650 aa18.81■□□□□ 0.6
LINC00404-201ENST00000418660 PKD2L1Q9P0L9 805 aa18.81■□□□□ 0.6
LINC00404-201ENST00000418660 TANC1Q9C0D5 1861 aa18.8■□□□□ 0.6
LINC00404-201ENST00000418660 GSTTP1A0A1W2PQM5 241 aa18.8■□□□□ 0.6
LINC00404-201ENST00000418660 ZBBXA8MT70 800 aa18.8■□□□□ 0.6
LINC00404-201ENST00000418660 GNAT1P11488 350 aa18.8■□□□□ 0.6
LINC00404-201ENST00000418660 PBX2P40425 430 aa18.8■□□□□ 0.6
LINC00404-201ENST00000418660 ANAPC15P60006 121 aa18.8■□□□□ 0.6
LINC00404-201ENST00000418660 RAB30Q15771 203 aa18.8■□□□□ 0.6
LINC00404-201ENST00000418660 SERINC5Q86VE9 423 aa18.8■□□□□ 0.6
LINC00404-201ENST00000418660 TRIM50Q86XT4 487 aa18.8■□□□□ 0.6
LINC00404-201ENST00000418660 ATP6V0A1Q93050 837 aa18.8■□□□□ 0.6
LINC00404-201ENST00000418660 CDX2Q99626 313 aaPredicted RBP18.8■□□□□ 0.6
LINC00404-201ENST00000418660 DOCK5Q9H7D0 1870 aa18.8■□□□□ 0.6
LINC00404-201ENST00000418660 NFASCO94856 1347 aa18.79■□□□□ 0.6
LINC00404-201ENST00000418660 MEIS1O00470 390 aa18.79■□□□□ 0.6
LINC00404-201ENST00000418660 EIF5BO60841 1220 aaKnown RBP18.79■□□□□ 0.6
LINC00404-201ENST00000418660 PPFIA3O75145 1194 aa18.79■□□□□ 0.6
LINC00404-201ENST00000418660 ARP10275 920 aa18.79■□□□□ 0.6
LINC00404-201ENST00000418660 ZNF76P36508 570 aa18.79■□□□□ 0.6
LINC00404-201ENST00000418660 ARHGAP4P98171 946 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms