RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 ATP6V0A1Q93050 837 aa16.65■□□□□ 0.26
PAF1-202ENST00000416728 RAD9AQ99638 391 aa16.65■□□□□ 0.26
PAF1-202ENST00000416728 USP26Q9BXU7 913 aa16.65■□□□□ 0.26
PAF1-202ENST00000416728 RTEL1Q9NZ71 1219 aa16.65■□□□□ 0.26
PAF1-202ENST00000416728 SEC63Q9UGP8 760 aaKnown RBP16.65■□□□□ 0.26
PAF1-202ENST00000416728 SPATA31C2B4DYI2 1134 aa16.64■□□□□ 0.26
PAF1-202ENST00000416728 PRC1O43663 620 aa16.64■□□□□ 0.26
PAF1-202ENST00000416728 SMIM10L2AP0DMW4 78 aa16.64■□□□□ 0.26
PAF1-202ENST00000416728 SMIM10L2BP0DMW5 78 aa16.64■□□□□ 0.26
PAF1-202ENST00000416728 SMARCA1P28370 1054 aa16.64■□□□□ 0.26
PAF1-202ENST00000416728 NFXL1Q6ZNB6 911 aa16.64■□□□□ 0.26
PAF1-202ENST00000416728 CYFIP1Q7L576 1253 aa16.64■□□□□ 0.26
PAF1-202ENST00000416728 LZTS2Q9BRK4 669 aa16.64■□□□□ 0.26
PAF1-202ENST00000416728 MTA3Q9BTC8 594 aa16.64■□□□□ 0.26
PAF1-202ENST00000416728 BCAS3Q9H6U6 928 aa16.64■□□□□ 0.26
PAF1-202ENST00000416728 COG5Q9UP83 839 aa16.64■□□□□ 0.26
PAF1-202ENST00000416728 TRIP12Q14669 1992 aaPredicted RBP16.64■□□□□ 0.25
PAF1-202ENST00000416728 BMP1P13497 986 aa16.64■□□□□ 0.25
PAF1-202ENST00000416728 HOXC8P31273 242 aa16.64■□□□□ 0.25
PAF1-202ENST00000416728 GNAQP50148 359 aa16.64■□□□□ 0.25
PAF1-202ENST00000416728 SEMA3FQ13275 785 aa16.64■□□□□ 0.25
PAF1-202ENST00000416728 PCNX4Q63HM2 1172 aa16.64■□□□□ 0.25
PAF1-202ENST00000416728 FAM117BQ6P1L5 589 aa16.64■□□□□ 0.25
PAF1-202ENST00000416728 XRRA1Q6P2D8 792 aa16.64■□□□□ 0.25
PAF1-202ENST00000416728 USP17L6PQ6QN14 398 aa16.64■□□□□ 0.25
PAF1-202ENST00000416728 TMTC2Q8N394 836 aa16.64■□□□□ 0.25
PAF1-202ENST00000416728 DBF4BQ8NFT6 615 aa16.64■□□□□ 0.25
PAF1-202ENST00000416728 GPR20Q99678 358 aa16.64■□□□□ 0.25
PAF1-202ENST00000416728 RNPEPQ9H4A4 650 aa16.64■□□□□ 0.25
PAF1-202ENST00000416728 ZNF215Q9UL58 517 aaPredicted RBP16.64■□□□□ 0.25
PAF1-202ENST00000416728 MTUS1Q9ULD2 1270 aa16.64■□□□□ 0.25
PAF1-202ENST00000416728 PRRC2BQ5JSZ5 2229 aaKnown RBP16.63■□□□□ 0.25
PAF1-202ENST00000416728 CCDC69A6NI79 296 aa16.63■□□□□ 0.25
PAF1-202ENST00000416728 PIK3CDO00329 1044 aa16.63■□□□□ 0.25
PAF1-202ENST00000416728 TREHO43280 583 aa16.63■□□□□ 0.25
PAF1-202ENST00000416728 LPXNO60711 386 aa16.63■□□□□ 0.25
PAF1-202ENST00000416728 AMHP03971 560 aa16.63■□□□□ 0.25
PAF1-202ENST00000416728 GNAT1P11488 350 aa16.63■□□□□ 0.25
PAF1-202ENST00000416728 MCM5P33992 734 aa16.63■□□□□ 0.25
PAF1-202ENST00000416728 KCNQ1P51787 676 aa16.63■□□□□ 0.25
PAF1-202ENST00000416728 NLRX1Q86UT6 975 aa16.63■□□□□ 0.25
PAF1-202ENST00000416728 GDPD5Q8WTR4 605 aa16.63■□□□□ 0.25
PAF1-202ENST00000416728 TMEM87BQ96K49 555 aa16.63■□□□□ 0.25
PAF1-202ENST00000416728 TGS1Q96RS0 853 aaKnown RBP16.63■□□□□ 0.25
PAF1-202ENST00000416728 SENP7Q9BQF6 1050 aa16.63■□□□□ 0.25
PAF1-202ENST00000416728 MUC3AQ02505 3323 aa16.62■□□□□ 0.25
PAF1-202ENST00000416728 BAZ2BQ9UIF8 2168 aaKnown RBP16.62■□□□□ 0.25
PAF1-202ENST00000416728 LINC01553A4QN01 128 aa16.62■□□□□ 0.25
PAF1-202ENST00000416728 SH2B2O14492 632 aaPredicted RBP16.62■□□□□ 0.25
PAF1-202ENST00000416728 MEIS2O14770 477 aa16.62■□□□□ 0.25
PAF1-202ENST00000416728 CAND2O75155 1236 aa16.62■□□□□ 0.25
PAF1-202ENST00000416728 PLEKHA8P1O95397 391 aa16.62■□□□□ 0.25
PAF1-202ENST00000416728 CTSHP09668 335 aa16.62■□□□□ 0.25
PAF1-202ENST00000416728 ERVK-21P61565 698 aa16.62■□□□□ 0.25
PAF1-202ENST00000416728 SP4Q02446 784 aa16.62■□□□□ 0.25
PAF1-202ENST00000416728 PLEKHG4Q58EX7 1191 aa16.62■□□□□ 0.25
PAF1-202ENST00000416728 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.62■□□□□ 0.25
PAF1-202ENST00000416728 TRIM50Q86XT4 487 aa16.62■□□□□ 0.25
PAF1-202ENST00000416728 MYOCDQ8IZQ8 938 aa16.62■□□□□ 0.25
PAF1-202ENST00000416728 NECAB3Q96P71 396 aaPredicted RBP16.62■□□□□ 0.25
PAF1-202ENST00000416728 LMCD1Q9NZU5 365 aa16.62■□□□□ 0.25
PAF1-202ENST00000416728 INSL6Q9Y581 213 aa16.62■□□□□ 0.25
PAF1-202ENST00000416728 RBAK-RBAKDNI3L0D1 243 aa16.61■□□□□ 0.25
PAF1-202ENST00000416728 CALM1P0DP23 149 aa16.61■□□□□ 0.25
PAF1-202ENST00000416728 CALM2P0DP24 149 aa16.61■□□□□ 0.25
PAF1-202ENST00000416728 CALM3P0DP25 149 aa16.61■□□□□ 0.25
PAF1-202ENST00000416728 UTP14CQ5TAP6 766 aaKnown RBP16.61■□□□□ 0.25
PAF1-202ENST00000416728 SRBD1Q8N5C6 995 aaKnown RBP16.61■□□□□ 0.25
PAF1-202ENST00000416728 GIMAP8Q8ND71 665 aaPredicted RBP16.61■□□□□ 0.25
PAF1-202ENST00000416728 SEPT8Q92599 483 aa16.61■□□□□ 0.25
PAF1-202ENST00000416728 HLA-CQ95604 372 aa16.61■□□□□ 0.25
PAF1-202ENST00000416728 LSG1Q9H089 658 aaKnown RBP16.61■□□□□ 0.25
PAF1-202ENST00000416728 PSTPIP2Q9H939 334 aa16.61■□□□□ 0.25
PAF1-202ENST00000416728 SUGCTQ9HAC7 445 aa16.61■□□□□ 0.25
PAF1-202ENST00000416728 SETD4Q9NVD3 440 aa16.61■□□□□ 0.25
PAF1-202ENST00000416728 SLC27A2O14975 620 aa16.6■□□□□ 0.25
PAF1-202ENST00000416728 RXRAP19793 462 aa16.6■□□□□ 0.25
PAF1-202ENST00000416728 LIFRP42702 1097 aa16.6■□□□□ 0.25
PAF1-202ENST00000416728 MKRN4PQ13434 485 aaPredicted RBP16.6■□□□□ 0.25
PAF1-202ENST00000416728 CMTR1Q8N1G2 835 aaKnown RBP16.6■□□□□ 0.25
PAF1-202ENST00000416728 CDHR1Q96JP9 859 aa16.6■□□□□ 0.25
PAF1-202ENST00000416728 ESYT1Q9BSJ8 1104 aa16.6■□□□□ 0.25
PAF1-202ENST00000416728 TELO2Q9Y4R8 837 aa16.6■□□□□ 0.25
PAF1-202ENST00000416728 SLC12A7Q9Y666 1083 aa16.6■□□□□ 0.25
PAF1-202ENST00000416728 MYH7BA7E2Y1 1941 aa16.59■□□□□ 0.25
PAF1-202ENST00000416728 ARHGAP4P98171 946 aa16.59■□□□□ 0.25
PAF1-202ENST00000416728 LMBR1Q8WVP7 490 aa16.59■□□□□ 0.25
PAF1-202ENST00000416728 GPRASP2Q96D09 838 aa16.59■□□□□ 0.25
PAF1-202ENST00000416728 PTPRSQ13332 1948 aa16.58■□□□□ 0.25
PAF1-202ENST00000416728 TCF7P36402 384 aaPredicted RBP16.58■□□□□ 0.24
PAF1-202ENST00000416728 HTRA4P83105 476 aaPredicted RBP16.58■□□□□ 0.24
PAF1-202ENST00000416728 COL9A3Q14050 684 aaPredicted RBP16.58■□□□□ 0.24
PAF1-202ENST00000416728 CREB3L3Q68CJ9 461 aa16.58■□□□□ 0.24
PAF1-202ENST00000416728 RAB11FIP4Q86YS3 637 aa16.58■□□□□ 0.24
PAF1-202ENST00000416728 ANO2Q9NQ90 1003 aa16.58■□□□□ 0.24
PAF1-202ENST00000416728 NRCAMQ92823 1304 aa16.58■□□□□ 0.24
PAF1-202ENST00000416728 hCG_1642624A0A1W2PR95 340 aa16.57■□□□□ 0.24
PAF1-202ENST00000416728 SPDYE3A6NKU9 549 aa16.57■□□□□ 0.24
PAF1-202ENST00000416728 KCNA2P16389 499 aa16.57■□□□□ 0.24
PAF1-202ENST00000416728 ADAM17P78536 824 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms