RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 LIG1P18858 919 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 CYP2B6P20813 491 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 FLT3LGP49771 235 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 NDUFA8P51970 172 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 SP2Q02086 613 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 FAM160A1Q05DH4 1040 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 SNW1Q13573 536 aaKnown RBP16.05■□□□□ 0.16
SF3B1-204ENST00000414963 KLHL40Q2TBA0 621 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 SPECC1Q5M775 1068 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 CCDC73Q6ZRK6 1079 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 FMR1NBQ8N0W7 255 aaPredicted RBP16.05■□□□□ 0.16
SF3B1-204ENST00000414963 CD99L2Q8TCZ2 262 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 SCFD2Q8WU76 684 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 ZNF296Q8WUU4 475 aaPredicted RBP16.05■□□□□ 0.16
SF3B1-204ENST00000414963 SDF4Q9BRK5 362 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 MMTAG2Q9BU76 263 aaKnown RBP16.05■□□□□ 0.16
SF3B1-204ENST00000414963 FLRT1Q9NZU1 646 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 SRRDQ9UH36 339 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 NRBP1Q9UHY1 535 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 DDX41Q9UJV9 622 aaKnown RBP16.05■□□□□ 0.16
SF3B1-204ENST00000414963 KCNH3Q9ULD8 1083 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 GABRQQ9UN88 632 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 LRRC37A2A6NM11 1700 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 MGAMO43451 1857 aa16.04■□□□□ 0.16
SF3B1-204ENST00000414963 POTEMA6NI47 508 aa16.04■□□□□ 0.16
SF3B1-204ENST00000414963 TRAK2O60296 914 aa16.04■□□□□ 0.16
SF3B1-204ENST00000414963 ECM2O94769 699 aaPredicted RBP16.04■□□□□ 0.16
SF3B1-204ENST00000414963 UBA7P41226 1012 aa16.04■□□□□ 0.16
SF3B1-204ENST00000414963 PRMT2P55345 433 aa16.04■□□□□ 0.16
SF3B1-204ENST00000414963 KRT76Q01546 638 aa16.04■□□□□ 0.16
SF3B1-204ENST00000414963 PRKCZQ05513 592 aa16.04■□□□□ 0.16
SF3B1-204ENST00000414963 ACVR2BQ13705 512 aa16.04■□□□□ 0.16
SF3B1-204ENST00000414963 NEDD9Q14511 834 aa16.04■□□□□ 0.16
SF3B1-204ENST00000414963 CCL14Q16627 93 aa16.04■□□□□ 0.16
SF3B1-204ENST00000414963 ZNF746Q6NUN9 644 aaPredicted RBP16.04■□□□□ 0.16
SF3B1-204ENST00000414963 KCTD17Q8N5Z5 321 aa16.04■□□□□ 0.16
SF3B1-204ENST00000414963 RDM1Q8NG50 284 aa16.04■□□□□ 0.16
SF3B1-204ENST00000414963 UIMC1Q96RL1 719 aa16.04■□□□□ 0.16
SF3B1-204ENST00000414963 PYM1Q9BRP8 204 aaKnown RBP16.04■□□□□ 0.16
SF3B1-204ENST00000414963 UNC45AQ9H3U1 944 aa16.04■□□□□ 0.16
SF3B1-204ENST00000414963 PLXNA1Q9UIW2 1896 aa16.03■□□□□ 0.16
SF3B1-204ENST00000414963 PP2D1A8MPX8 630 aa16.03■□□□□ 0.16
SF3B1-204ENST00000414963 UBA1P22314 1058 aaKnown RBP16.03■□□□□ 0.16
SF3B1-204ENST00000414963 CDC25AP30304 524 aa16.03■□□□□ 0.16
SF3B1-204ENST00000414963 SFNP31947 248 aa16.03■□□□□ 0.16
SF3B1-204ENST00000414963 TXLNAP40222 546 aa16.03■□□□□ 0.16
SF3B1-204ENST00000414963 SYKP43405 635 aa16.03■□□□□ 0.16
SF3B1-204ENST00000414963 TTLL4Q14679 1199 aa16.03■□□□□ 0.16
SF3B1-204ENST00000414963 EPHA7Q15375 998 aa16.03■□□□□ 0.16
SF3B1-204ENST00000414963 HYIQ5T013 277 aa16.03■□□□□ 0.16
SF3B1-204ENST00000414963 KRT79Q5XKE5 535 aa16.03■□□□□ 0.16
SF3B1-204ENST00000414963 IQSEC1Q6DN90 963 aa16.03■□□□□ 0.16
SF3B1-204ENST00000414963 EEPD1Q7L9B9 569 aa16.03■□□□□ 0.16
SF3B1-204ENST00000414963 CABP7Q86V35 215 aa16.03■□□□□ 0.16
SF3B1-204ENST00000414963 FBXO16Q8IX29 292 aaPredicted RBP16.03■□□□□ 0.16
SF3B1-204ENST00000414963 HSD17B14Q9BPX1 270 aa16.03■□□□□ 0.16
SF3B1-204ENST00000414963 POLR3CQ9BUI4 534 aaPredicted RBP16.03■□□□□ 0.16
SF3B1-204ENST00000414963 USP25Q9UHP3 1055 aa16.03■□□□□ 0.16
SF3B1-204ENST00000414963 DOCK3Q8IZD9 2030 aa16.02■□□□□ 0.16
SF3B1-204ENST00000414963 EML1O00423 815 aa16.02■□□□□ 0.16
SF3B1-204ENST00000414963 NR1I2O75469 434 aa16.02■□□□□ 0.16
SF3B1-204ENST00000414963 ARIH2O95376 493 aa16.02■□□□□ 0.16
SF3B1-204ENST00000414963 CCNE2O96020 404 aa16.02■□□□□ 0.16
SF3B1-204ENST00000414963 MUTP22033 750 aa16.02■□□□□ 0.16
SF3B1-204ENST00000414963 RPA1P27694 616 aa16.02■□□□□ 0.16
SF3B1-204ENST00000414963 JAK3P52333 1124 aa16.02■□□□□ 0.16
SF3B1-204ENST00000414963 METTL7BQ6UX53 244 aa16.02■□□□□ 0.16
SF3B1-204ENST00000414963 ELOA2Q8IYF1 753 aaPredicted RBP16.02■□□□□ 0.16
SF3B1-204ENST00000414963 ERMNQ8TAM6 284 aa16.02■□□□□ 0.16
SF3B1-204ENST00000414963 TIGD1Q96MW7 591 aa16.02■□□□□ 0.16
SF3B1-204ENST00000414963 JPH1Q9HDC5 661 aaPredicted RBP16.02■□□□□ 0.16
SF3B1-204ENST00000414963 PDGFCQ9NRA1 345 aa16.02■□□□□ 0.16
SF3B1-204ENST00000414963 DDX19AQ9NUU7 478 aaKnown RBP16.02■□□□□ 0.16
SF3B1-204ENST00000414963 DACT1Q9NYF0 836 aa16.02■□□□□ 0.16
SF3B1-204ENST00000414963 PKD2L1Q9P0L9 805 aa16.02■□□□□ 0.16
SF3B1-204ENST00000414963 CCDC39Q9UFE4 941 aa16.02■□□□□ 0.16
SF3B1-204ENST00000414963 A0A087X0B3 334 aa16.01■□□□□ 0.15
SF3B1-204ENST00000414963 WDR64B1ANS9 1081 aa16.01■□□□□ 0.15
SF3B1-204ENST00000414963 ZNF202O95125 648 aa16.01■□□□□ 0.15
SF3B1-204ENST00000414963 ATG7O95352 703 aa16.01■□□□□ 0.15
SF3B1-204ENST00000414963 ZNF865P0CJ78 1059 aaPredicted RBP16.01■□□□□ 0.15
SF3B1-204ENST00000414963 TXNP10599 105 aaKnown RBP16.01■□□□□ 0.15
SF3B1-204ENST00000414963 CYP2C19P33261 490 aa16.01■□□□□ 0.15
SF3B1-204ENST00000414963 E2F4Q16254 413 aa16.01■□□□□ 0.15
SF3B1-204ENST00000414963 TPRNQ4KMQ1 711 aa16.01■□□□□ 0.15
SF3B1-204ENST00000414963 CELF3Q5SZQ8 465 aaKnown RBP16.01■□□□□ 0.15
SF3B1-204ENST00000414963 MFSD14CQ5VZR4 134 aa16.01■□□□□ 0.15
SF3B1-204ENST00000414963 HAUS3Q68CZ6 603 aa16.01■□□□□ 0.15
SF3B1-204ENST00000414963 NCAPH2Q6IBW4 605 aa16.01■□□□□ 0.15
SF3B1-204ENST00000414963 SMAP1Q8IYB5 467 aaPredicted RBP16.01■□□□□ 0.15
SF3B1-204ENST00000414963 IQUBQ8NA54 791 aa16.01■□□□□ 0.15
SF3B1-204ENST00000414963 NEK9Q8TD19 979 aa16.01■□□□□ 0.15
SF3B1-204ENST00000414963 PXYLP1Q8TE99 480 aa16.01■□□□□ 0.15
SF3B1-204ENST00000414963 SNX29Q8TEQ0 813 aa16.01■□□□□ 0.15
SF3B1-204ENST00000414963 EMID1Q96A84 441 aaPredicted RBP16.01■□□□□ 0.15
SF3B1-204ENST00000414963 EIF2AK1Q9BQI3 630 aaKnown RBP16.01■□□□□ 0.15
SF3B1-204ENST00000414963 BCAS3Q9H6U6 928 aa16.01■□□□□ 0.15
SF3B1-204ENST00000414963 TUFT1Q9NNX1 390 aa16.01■□□□□ 0.15
SF3B1-204ENST00000414963 SLC9A2Q9UBY0 812 aa16.01■□□□□ 0.15
SF3B1-204ENST00000414963 TCEAL9Q9UHQ7 104 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms