RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 INPP4AQ96PE3 977 aaPredicted RBP28.2■■■□□ 2.1
AC005540.1-201ENST00000413911 TUT1Q9H6E5 874 aaKnown RBP28.2■■■□□ 2.1
AC005540.1-201ENST00000413911 ERICH2A1L162 156 aa28.19■■■□□ 2.1
AC005540.1-201ENST00000413911 C17orf102A2RUQ5 167 aa28.19■■■□□ 2.1
AC005540.1-201ENST00000413911 RSPH10B2B2RC85 870 aa28.19■■■□□ 2.1
AC005540.1-201ENST00000413911 SPATA31C2B4DYI2 1134 aa28.19■■■□□ 2.1
AC005540.1-201ENST00000413911 SGSM2O43147 1006 aa28.19■■■□□ 2.1
AC005540.1-201ENST00000413911 TREHO43280 583 aa28.19■■■□□ 2.1
AC005540.1-201ENST00000413911 RSPH10BP0C881 870 aa28.19■■■□□ 2.1
AC005540.1-201ENST00000413911 ICAM3P32942 547 aa28.19■■■□□ 2.1
AC005540.1-201ENST00000413911 RALYLQ86SE5 291 aaKnown RBP28.19■■■□□ 2.1
AC005540.1-201ENST00000413911 MB21D2Q8IYB1 491 aaPredicted RBP28.19■■■□□ 2.1
AC005540.1-201ENST00000413911 RUFY2Q8WXA3 655 aa28.19■■■□□ 2.1
AC005540.1-201ENST00000413911 ATP6V0A1Q93050 837 aa28.19■■■□□ 2.1
AC005540.1-201ENST00000413911 HLA-CQ95604 372 aa28.19■■■□□ 2.1
AC005540.1-201ENST00000413911 RNPEPQ9H4A4 650 aa28.19■■■□□ 2.1
AC005540.1-201ENST00000413911 RTEL1Q9NZ71 1219 aa28.19■■■□□ 2.1
AC005540.1-201ENST00000413911 DOCK5Q9H7D0 1870 aa28.19■■■□□ 2.1
AC005540.1-201ENST00000413911 EFCAB14O75071 495 aa28.18■■■□□ 2.1
AC005540.1-201ENST00000413911 TRAF1Q13077 416 aa28.18■■■□□ 2.1
AC005540.1-201ENST00000413911 COL9A3Q14050 684 aaPredicted RBP28.18■■■□□ 2.1
AC005540.1-201ENST00000413911 CYFIP1Q7L576 1253 aa28.18■■■□□ 2.1
AC005540.1-201ENST00000413911 TGS1Q96RS0 853 aaKnown RBP28.18■■■□□ 2.1
AC005540.1-201ENST00000413911 MYL10Q9BUA6 226 aa28.18■■■□□ 2.1
AC005540.1-201ENST00000413911 SUPT16HQ9Y5B9 1047 aaKnown RBP28.18■■■□□ 2.1
AC005540.1-201ENST00000413911 BRWD1Q9NSI6 2320 aa28.17■■■□□ 2.1
AC005540.1-201ENST00000413911 PLEKHG4Q58EX7 1191 aa28.17■■■□□ 2.1
AC005540.1-201ENST00000413911 USP17L6PQ6QN14 398 aa28.17■■■□□ 2.1
AC005540.1-201ENST00000413911 GPR20Q99678 358 aa28.17■■■□□ 2.1
AC005540.1-201ENST00000413911 CATIPQ7Z7H3 387 aa28.16■■■□□ 2.1
AC005540.1-201ENST00000413911 TRIM50Q86XT4 487 aa28.16■■■□□ 2.1
AC005540.1-201ENST00000413911 MAP4K1Q92918 833 aa28.16■■■□□ 2.1
AC005540.1-201ENST00000413911 C17orf80Q9BSJ5 609 aa28.16■■■□□ 2.1
AC005540.1-201ENST00000413911 LY9Q9HBG7 655 aa28.16■■■□□ 2.1
AC005540.1-201ENST00000413911 LMCD1Q9NZU5 365 aa28.16■■■□□ 2.1
AC005540.1-201ENST00000413911 MICAL3Q7RTP6 2002 aa28.16■■■□□ 2.1
AC005540.1-201ENST00000413911 EMSYQ7Z589 1322 aa28.16■■■□□ 2.1
AC005540.1-201ENST00000413911 SART3Q15020 963 aaKnown RBP28.15■■■□□ 2.1
AC005540.1-201ENST00000413911 GNPTABQ3T906 1256 aa28.15■■■□□ 2.1
AC005540.1-201ENST00000413911 METTL7BQ6UX53 244 aa28.15■■■□□ 2.1
AC005540.1-201ENST00000413911 SETD4Q9NVD3 440 aa28.15■■■□□ 2.1
AC005540.1-201ENST00000413911 SIP14410 1827 aa28.15■■■□□ 2.1
AC005540.1-201ENST00000413911 NOP56O00567 594 aaKnown RBP28.14■■■□□ 2.1
AC005540.1-201ENST00000413911 MEIS2O14770 477 aa28.14■■■□□ 2.1
AC005540.1-201ENST00000413911 HTRA4P83105 476 aaPredicted RBP28.14■■■□□ 2.1
AC005540.1-201ENST00000413911 MYOCDQ8IZQ8 938 aa28.14■■■□□ 2.1
AC005540.1-201ENST00000413911 USP26Q9BXU7 913 aa28.14■■■□□ 2.1
AC005540.1-201ENST00000413911 FIBPO43427 364 aa28.13■■■□□ 2.09
AC005540.1-201ENST00000413911 STAM2O75886 525 aa28.13■■■□□ 2.09
AC005540.1-201ENST00000413911 CTSHP09668 335 aa28.13■■■□□ 2.09
AC005540.1-201ENST00000413911 NEDD9Q14511 834 aa28.13■■■□□ 2.09
AC005540.1-201ENST00000413911 ZNF654Q8IZM8 581 aa28.13■■■□□ 2.09
AC005540.1-201ENST00000413911 SPZ1Q9BXG8 430 aa28.13■■■□□ 2.09
AC005540.1-201ENST00000413911 INSL6Q9Y581 213 aa28.13■■■□□ 2.09
AC005540.1-201ENST00000413911 RBM8AQ9Y5S9 174 aaKnown RBP28.13■■■□□ 2.09
AC005540.1-201ENST00000413911 AMHP03971 560 aa28.12■■■□□ 2.09
AC005540.1-201ENST00000413911 ADAM17P78536 824 aa28.12■■■□□ 2.09
AC005540.1-201ENST00000413911 SP7Q8TDD2 431 aaPredicted RBP28.12■■■□□ 2.09
AC005540.1-201ENST00000413911 MAP3K14Q99558 947 aa28.12■■■□□ 2.09
AC005540.1-201ENST00000413911 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.11■■■□□ 2.09
AC005540.1-201ENST00000413911 PLEKHA8P1O95397 391 aa28.11■■■□□ 2.09
AC005540.1-201ENST00000413911 IRX6P78412 446 aaPredicted RBP28.11■■■□□ 2.09
AC005540.1-201ENST00000413911 SP4Q02446 784 aa28.11■■■□□ 2.09
AC005540.1-201ENST00000413911 UTP14CQ5TAP6 766 aaKnown RBP28.11■■■□□ 2.09
AC005540.1-201ENST00000413911 PCNX4Q63HM2 1172 aa28.11■■■□□ 2.09
AC005540.1-201ENST00000413911 CMTR1Q8N1G2 835 aaKnown RBP28.11■■■□□ 2.09
AC005540.1-201ENST00000413911 SRBD1Q8N5C6 995 aaKnown RBP28.11■■■□□ 2.09
AC005540.1-201ENST00000413911 KHSRPQ92945 711 aaKnown RBP eCLIP28.11■■■□□ 2.09
AC005540.1-201ENST00000413911 EPHX3Q9H6B9 360 aa28.11■■■□□ 2.09
AC005540.1-201ENST00000413911 PIK3CDO00329 1044 aa28.1■■■□□ 2.09
AC005540.1-201ENST00000413911 SMARCC2Q8TAQ2 1214 aa28.1■■■□□ 2.09
AC005540.1-201ENST00000413911 RRP36Q96EU6 259 aaKnown RBP28.1■■■□□ 2.09
AC005540.1-201ENST00000413911 ATP9AO75110 1047 aa28.09■■■□□ 2.09
AC005540.1-201ENST00000413911 DDAH1O94760 285 aa28.09■■■□□ 2.09
AC005540.1-201ENST00000413911 FBXO22Q8NEZ5 403 aa28.09■■■□□ 2.09
AC005540.1-201ENST00000413911 CTCFLQ8NI51 663 aaPredicted RBP28.09■■■□□ 2.09
AC005540.1-201ENST00000413911 LMBR1Q8WVP7 490 aa28.09■■■□□ 2.09
AC005540.1-201ENST00000413911 SEPT8Q92599 483 aa28.09■■■□□ 2.09
AC005540.1-201ENST00000413911 TOP1MTQ969P6 601 aa28.09■■■□□ 2.09
AC005540.1-201ENST00000413911 SENP7Q9BQF6 1050 aa28.09■■■□□ 2.09
AC005540.1-201ENST00000413911 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.08■■■□□ 2.09
AC005540.1-201ENST00000413911 PRC1O43663 620 aa28.08■■■□□ 2.09
AC005540.1-201ENST00000413911 RXRAP19793 462 aa28.08■■■□□ 2.09
AC005540.1-201ENST00000413911 SMARCA1P28370 1054 aa28.08■■■□□ 2.09
AC005540.1-201ENST00000413911 CD320Q9NPF0 282 aa28.08■■■□□ 2.09
AC005540.1-201ENST00000413911 SH2B2O14492 632 aaPredicted RBP28.07■■■□□ 2.08
AC005540.1-201ENST00000413911 CAND2O75155 1236 aa28.07■■■□□ 2.08
AC005540.1-201ENST00000413911 ARHGAP4P98171 946 aa28.07■■■□□ 2.08
AC005540.1-201ENST00000413911 FAM26DQ5JW98 314 aa28.07■■■□□ 2.08
AC005540.1-201ENST00000413911 UBE2ZQ9H832 354 aaPredicted RBP28.07■■■□□ 2.08
AC005540.1-201ENST00000413911 UPP2O95045 317 aa28.06■■■□□ 2.08
AC005540.1-201ENST00000413911 GNAT1P11488 350 aa28.06■■■□□ 2.08
AC005540.1-201ENST00000413911 KIF5BP33176 963 aa28.06■■■□□ 2.08
AC005540.1-201ENST00000413911 EPC2Q52LR7 807 aa28.06■■■□□ 2.08
AC005540.1-201ENST00000413911 XRRA1Q6P2D8 792 aa28.06■■■□□ 2.08
AC005540.1-201ENST00000413911 RUFY4Q6ZNE9 571 aa28.06■■■□□ 2.08
AC005540.1-201ENST00000413911 RAB11FIP4Q86YS3 637 aa28.06■■■□□ 2.08
AC005540.1-201ENST00000413911 CUL5Q93034 780 aa28.06■■■□□ 2.08
AC005540.1-201ENST00000413911 C1QTNF1Q9BXJ1 281 aa28.06■■■□□ 2.08
AC005540.1-201ENST00000413911 LSG1Q9H089 658 aaKnown RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms