RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 UBAC1Q9BSL1 405 aa14.13□□□□□ -0.15
LIMS2-210ENST00000413578 RNPEPQ9H4A4 650 aa14.13□□□□□ -0.15
LIMS2-210ENST00000413578 MUC6Q6W4X9 2439 aa14.13□□□□□ -0.15
LIMS2-210ENST00000413578 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.12□□□□□ -0.15
LIMS2-210ENST00000413578 H3BRB1 525 aa14.12□□□□□ -0.15
LIMS2-210ENST00000413578 HIP1O00291 1037 aa14.12□□□□□ -0.15
LIMS2-210ENST00000413578 TREHO43280 583 aa14.12□□□□□ -0.15
LIMS2-210ENST00000413578 CYTH3O43739 400 aa14.12□□□□□ -0.15
LIMS2-210ENST00000413578 CAND2O75155 1236 aa14.12□□□□□ -0.15
LIMS2-210ENST00000413578 SMIM10L2AP0DMW4 78 aa14.12□□□□□ -0.15
LIMS2-210ENST00000413578 SMIM10L2BP0DMW5 78 aa14.12□□□□□ -0.15
LIMS2-210ENST00000413578 IL9P15248 144 aa14.12□□□□□ -0.15
LIMS2-210ENST00000413578 CCND2P30279 289 aa14.12□□□□□ -0.15
LIMS2-210ENST00000413578 ICAM3P32942 547 aa14.12□□□□□ -0.15
LIMS2-210ENST00000413578 ADAM17P78536 824 aa14.12□□□□□ -0.15
LIMS2-210ENST00000413578 SEMA3FQ13275 785 aa14.12□□□□□ -0.15
LIMS2-210ENST00000413578 AAMPQ13685 434 aa14.12□□□□□ -0.15
LIMS2-210ENST00000413578 ATP6V0A1Q93050 837 aa14.12□□□□□ -0.15
LIMS2-210ENST00000413578 SAMD11Q96NU1 681 aa14.12□□□□□ -0.15
LIMS2-210ENST00000413578 TUT1Q9H6E5 874 aaKnown RBP14.12□□□□□ -0.15
LIMS2-210ENST00000413578 CTNNA3Q9UI47 895 aa14.12□□□□□ -0.15
LIMS2-210ENST00000413578 SIP14410 1827 aa14.12□□□□□ -0.15
LIMS2-210ENST00000413578 GRXCR2A6NFK2 248 aa14.11□□□□□ -0.15
LIMS2-210ENST00000413578 H3BNC9 293 aa14.11□□□□□ -0.15
LIMS2-210ENST00000413578 GCOM1H8Y6P7 765 aaPredicted RBP14.11□□□□□ -0.15
LIMS2-210ENST00000413578 IGHDP01880 384 aa14.11□□□□□ -0.15
LIMS2-210ENST00000413578 LINC00271P0C7V0 271 aa14.11□□□□□ -0.15
LIMS2-210ENST00000413578 POLR2MP0CAP2 368 aa14.11□□□□□ -0.15
LIMS2-210ENST00000413578 MRPS9P82933 396 aaKnown RBP14.11□□□□□ -0.15
LIMS2-210ENST00000413578 GRM4Q14833 912 aa14.11□□□□□ -0.15
LIMS2-210ENST00000413578 ZFP91Q96JP5 570 aaPredicted RBP14.11□□□□□ -0.15
LIMS2-210ENST00000413578 PIGSQ96S52 555 aa14.11□□□□□ -0.15
LIMS2-210ENST00000413578 MLXIPQ9HAP2 919 aa14.11□□□□□ -0.15
LIMS2-210ENST00000413578 PRR33A8MZF0 331 aa14.1□□□□□ -0.15
LIMS2-210ENST00000413578 SPATA31C2B4DYI2 1134 aa14.1□□□□□ -0.15
LIMS2-210ENST00000413578 TROAPQ12815 778 aa14.1□□□□□ -0.15
LIMS2-210ENST00000413578 PTPROQ16827 1216 aa14.1□□□□□ -0.15
LIMS2-210ENST00000413578 TIGD5Q53EQ6 642 aa14.1□□□□□ -0.15
LIMS2-210ENST00000413578 FAM26DQ5JW98 314 aa14.1□□□□□ -0.15
LIMS2-210ENST00000413578 PTCRAQ6ISU1 281 aaPredicted RBP14.1□□□□□ -0.15
LIMS2-210ENST00000413578 B4GALNT3Q6L9W6 998 aa14.1□□□□□ -0.15
LIMS2-210ENST00000413578 METTL7BQ6UX53 244 aa14.1□□□□□ -0.15
LIMS2-210ENST00000413578 SEPT8Q92599 483 aa14.1□□□□□ -0.15
LIMS2-210ENST00000413578 GPR20Q99678 358 aa14.1□□□□□ -0.15
LIMS2-210ENST00000413578 USP26Q9BXU7 913 aa14.1□□□□□ -0.15
LIMS2-210ENST00000413578 TELO2Q9Y4R8 837 aa14.1□□□□□ -0.15
LIMS2-210ENST00000413578 MICAL3Q7RTP6 2002 aa14.09□□□□□ -0.15
LIMS2-210ENST00000413578 PNMA6FA0A0J9YX94 578 aa14.09□□□□□ -0.15
LIMS2-210ENST00000413578 STAM2O75886 525 aa14.09□□□□□ -0.15
LIMS2-210ENST00000413578 PUS10Q3MIT2 529 aaKnown RBP14.09□□□□□ -0.15
LIMS2-210ENST00000413578 HOMER1Q86YM7 354 aa14.09□□□□□ -0.15
LIMS2-210ENST00000413578 TMEM192Q8IY95 271 aa14.09□□□□□ -0.15
LIMS2-210ENST00000413578 APBB2Q92870 758 aa14.09□□□□□ -0.15
LIMS2-210ENST00000413578 PABPC5Q96DU9 382 aaKnown RBP14.09□□□□□ -0.15
LIMS2-210ENST00000413578 YME1L1Q96TA2 773 aa14.09□□□□□ -0.15
LIMS2-210ENST00000413578 RWDD1Q9H446 243 aaPredicted RBP14.09□□□□□ -0.15
LIMS2-210ENST00000413578 RC3H2Q9HBD1 1191 aaKnown RBP14.09□□□□□ -0.15
LIMS2-210ENST00000413578 SENP2Q9HC62 589 aa14.09□□□□□ -0.15
LIMS2-210ENST00000413578 SETD4Q9NVD3 440 aa14.09□□□□□ -0.15
LIMS2-210ENST00000413578 POTEB3A0JP26 581 aa14.08□□□□□ -0.16
LIMS2-210ENST00000413578 H3BQ06 376 aaPredicted RBP14.08□□□□□ -0.16
LIMS2-210ENST00000413578 CTSHP09668 335 aa14.08□□□□□ -0.16
LIMS2-210ENST00000413578 TRAF1Q13077 416 aa14.08□□□□□ -0.16
LIMS2-210ENST00000413578 GPM6BQ13491 265 aa14.08□□□□□ -0.16
LIMS2-210ENST00000413578 NEDD9Q14511 834 aa14.08□□□□□ -0.16
LIMS2-210ENST00000413578 GNPTABQ3T906 1256 aa14.08□□□□□ -0.16
LIMS2-210ENST00000413578 TCEAL5Q5H9L2 206 aa14.08□□□□□ -0.16
LIMS2-210ENST00000413578 POTEBQ6S5H4 581 aa14.08□□□□□ -0.16
LIMS2-210ENST00000413578 CYFIP1Q7L576 1253 aa14.08□□□□□ -0.16
LIMS2-210ENST00000413578 RPAINQ86UA6 219 aa14.08□□□□□ -0.16
LIMS2-210ENST00000413578 FCHSD1Q86WN1 690 aa14.08□□□□□ -0.16
LIMS2-210ENST00000413578 TRIM50Q86XT4 487 aa14.08□□□□□ -0.16
LIMS2-210ENST00000413578 BANK1Q8NDB2 785 aa14.08□□□□□ -0.16
LIMS2-210ENST00000413578 SENP7Q9BQF6 1050 aa14.08□□□□□ -0.16
LIMS2-210ENST00000413578 C19orf67A6NJJ6 358 aa14.07□□□□□ -0.16
LIMS2-210ENST00000413578 C5orf67F2Z3F1 127 aa14.07□□□□□ -0.16
LIMS2-210ENST00000413578 NOP56O00567 594 aaKnown RBP14.07□□□□□ -0.16
LIMS2-210ENST00000413578 FIBPO43427 364 aa14.07□□□□□ -0.16
LIMS2-210ENST00000413578 CYP21A2P08686 494 aa14.07□□□□□ -0.16
LIMS2-210ENST00000413578 LMBR1Q8WVP7 490 aa14.07□□□□□ -0.16
LIMS2-210ENST00000413578 IFIH1Q9BYX4 1025 aaKnown RBP14.07□□□□□ -0.16
LIMS2-210ENST00000413578 EHMT1Q9H9B1 1298 aa14.07□□□□□ -0.16
LIMS2-210ENST00000413578 CHRNA1P02708 482 aa14.06□□□□□ -0.16
LIMS2-210ENST00000413578 GNAT1P11488 350 aa14.06□□□□□ -0.16
LIMS2-210ENST00000413578 ALADP13716 330 aa14.06□□□□□ -0.16
LIMS2-210ENST00000413578 SSTR3P32745 418 aaPredicted RBP14.06□□□□□ -0.16
LIMS2-210ENST00000413578 LTBRP36941 435 aa14.06□□□□□ -0.16
LIMS2-210ENST00000413578 ZP2Q05996 745 aa14.06□□□□□ -0.16
LIMS2-210ENST00000413578 MGAT3Q09327 533 aa14.06□□□□□ -0.16
LIMS2-210ENST00000413578 CTC1Q2NKJ3 1217 aa14.06□□□□□ -0.16
LIMS2-210ENST00000413578 NSUN3Q9H649 340 aaKnown RBP14.06□□□□□ -0.16
LIMS2-210ENST00000413578 PRKAG3Q9UGI9 489 aa14.06□□□□□ -0.16
LIMS2-210ENST00000413578 TAF6LQ9Y6J9 622 aa14.06□□□□□ -0.16
LIMS2-210ENST00000413578 NRCAMQ92823 1304 aa14.06□□□□□ -0.16
LIMS2-210ENST00000413578 PIK3CDO00329 1044 aa14.05□□□□□ -0.16
LIMS2-210ENST00000413578 MEIS2O14770 477 aa14.05□□□□□ -0.16
LIMS2-210ENST00000413578 UPP2O95045 317 aa14.05□□□□□ -0.16
LIMS2-210ENST00000413578 GSPT1P15170 499 aaKnown RBP14.05□□□□□ -0.16
LIMS2-210ENST00000413578 ANTXR2P58335 489 aa14.05□□□□□ -0.16
LIMS2-210ENST00000413578 ARHGAP4P98171 946 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms