RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 EURLQ9NYK6 297 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 MOCS1Q9NZB8 636 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 SFMBT1Q9UHJ3 866 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 ANKARQ7Z5J8 1434 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 C2orf81A6NN90 581 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 LCA5LO95447 670 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 CDK4P11802 303 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 CD9P21926 228 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 FECHP22830 423 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 AP3M2P53677 418 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 FAM160A1Q05DH4 1040 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 MCL1Q07820 350 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 ST3GAL1Q11201 340 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 WASHC4Q2M389 1173 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 NLRP9Q7RTR0 991 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 HOMER1Q86YM7 354 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 CCAR1Q8IX12 1150 aaKnown RBP5.7□□□□□ -1.5
HERC4-205ENST00000412272 PPFIBP2Q8ND30 876 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 CASP10Q92851 521 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 PPP2R2CQ9Y2T4 447 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 TTLL13PA6NNM8 815 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 AKR1B15C9JRZ8 316 aaPredicted RBP5.7□□□□□ -1.5
HERC4-205ENST00000412272 MAP3K7O43318 606 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 RNGTTO60942 597 aaKnown RBP5.7□□□□□ -1.5
HERC4-205ENST00000412272 NR1I2O75469 434 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 ITGA2BP08514 1039 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 IFIT2P09913 472 aaKnown RBP5.7□□□□□ -1.5
HERC4-205ENST00000412272 CYP2C9P11712 490 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 ALAS1P13196 640 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 GJB2P29033 226 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 UBASH3AP57075 661 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 HSPA14Q0VDF9 509 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 ZNF365Q70YC5 407 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 ZNF598Q86UK7 904 aaKnown RBP5.7□□□□□ -1.5
HERC4-205ENST00000412272 GALNT6Q8NCL4 622 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 SCG3Q8WXD2 468 aaKnown RBP5.7□□□□□ -1.5
HERC4-205ENST00000412272 NXPE3Q969Y0 559 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 PGBD1Q96JS3 809 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 WDR24Q96S15 920 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 BEGAINQ9BUH8 593 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 EPN3Q9H201 632 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 ETNK2Q9NVF9 386 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 TBCCD1Q9NVR7 557 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 CTNNAL1Q9UBT7 734 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 HMGXB4Q9UGU5 601 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 RRP7AQ9Y3A4 280 aaKnown RBP5.7□□□□□ -1.5
HERC4-205ENST00000412272 LRRC42Q9Y546 428 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 GAKO14976 1311 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 DLC1Q96QB1 1528 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 A6NJR5 290 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 SPDYE16A6NNV3 312 aaPredicted RBP5.7□□□□□ -1.5
HERC4-205ENST00000412272 HAT1O14929 419 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 TMCC2O75069 709 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 GHRP10912 638 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 ATP5DP30049 168 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 ADCY8P40145 1251 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 RCAN1P53805 252 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 AK2P54819 239 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 DR1Q01658 176 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 SH3D19Q5HYK7 790 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 AADATQ8N5Z0 425 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 GIMAP8Q8ND71 665 aaPredicted RBP5.7□□□□□ -1.5
HERC4-205ENST00000412272 HELQQ8TDG4 1101 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 LENG1Q96BZ8 264 aaPredicted RBP5.7□□□□□ -1.5
HERC4-205ENST00000412272 PLVAPQ9BX97 442 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 FTOQ9C0B1 505 aaKnown RBP eCLIP5.7□□□□□ -1.5
HERC4-205ENST00000412272 SIL1Q9H173 461 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 GIT1Q9Y2X7 761 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 SNX14Q9Y5W7 946 aa5.7□□□□□ -1.5
HERC4-205ENST00000412272 LRRC72A6NJI9 287 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 BCL9O00512 1426 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 PLCG2P16885 1265 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 BPIFB3P59826 476 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 DSTNP60981 165 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 TUBA4AP68366 448 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 PIP4K2BP78356 416 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 BASP1P80723 227 aaKnown RBP5.69□□□□□ -1.5
HERC4-205ENST00000412272 CFAP100Q494V2 611 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 DDX60Q8IY21 1712 aaKnown RBP5.69□□□□□ -1.5
HERC4-205ENST00000412272 SH3KBP1Q96B97 665 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 MTMR12Q9C0I1 747 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 SNRKQ9NRH2 765 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 PANK4Q9NVE7 773 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 SIRT5Q9NXA8 310 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 EXOC7Q9UPT5 735 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 TSC22D4Q9Y3Q8 395 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 MROH2AA6NES4 1674 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 CD163L1Q9NR16 1453 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 JCADQ9P266 1359 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 APOEP02649 317 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 TOP1P11387 765 aaKnown RBP5.69□□□□□ -1.5
HERC4-205ENST00000412272 CCNFP41002 786 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 HSD17B7P56937 341 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 TBX4P57082 545 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 IGBP1P78318 339 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 ZNF268Q14587 947 aaPredicted RBP5.69□□□□□ -1.5
HERC4-205ENST00000412272 NCAPHQ15003 741 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 ACAP1Q15027 740 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 CNPY1Q3B7I2 92 aa5.69□□□□□ -1.5
HERC4-205ENST00000412272 TMEM154Q6P9G4 183 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms