RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 PRICKLE3O43900 615 aaPredicted RBP7.23□□□□□ -1.25
HDAC9-205ENST00000411993 CNR2P34972 360 aa7.23□□□□□ -1.25
HDAC9-205ENST00000411993 SPIRE1Q08AE8 756 aa7.23□□□□□ -1.25
HDAC9-205ENST00000411993 RGL3Q3MIN7 710 aa7.23□□□□□ -1.25
HDAC9-205ENST00000411993 OTOP3Q7RTS5 596 aa7.23□□□□□ -1.25
HDAC9-205ENST00000411993 FERMT3Q86UX7 667 aa7.23□□□□□ -1.25
HDAC9-205ENST00000411993 TMEM209Q96SK2 561 aa7.23□□□□□ -1.25
HDAC9-205ENST00000411993 LNPKQ9C0E8 428 aa7.23□□□□□ -1.25
HDAC9-205ENST00000411993 LRG1P02750 347 aa7.22□□□□□ -1.25
HDAC9-205ENST00000411993 SOD2P04179 222 aa7.22□□□□□ -1.25
HDAC9-205ENST00000411993 COL6A2P12110 1019 aa7.22□□□□□ -1.25
HDAC9-205ENST00000411993 PLP2Q04941 152 aa7.22□□□□□ -1.25
HDAC9-205ENST00000411993 GRIN1Q05586 938 aa7.22□□□□□ -1.25
HDAC9-205ENST00000411993 ADAM9Q13443 819 aa7.22□□□□□ -1.25
HDAC9-205ENST00000411993 FAM26FQ5R3K3 315 aa7.22□□□□□ -1.25
HDAC9-205ENST00000411993 ZFYVE27Q5T4F4 411 aa7.22□□□□□ -1.25
HDAC9-205ENST00000411993 TMC5Q6UXY8 1006 aa7.22□□□□□ -1.25
HDAC9-205ENST00000411993 FAM124AQ86V42 546 aa7.22□□□□□ -1.25
HDAC9-205ENST00000411993 ARMC5Q96C12 935 aa7.22□□□□□ -1.25
HDAC9-205ENST00000411993 WRNIP1Q96S55 665 aa7.22□□□□□ -1.25
HDAC9-205ENST00000411993 TRBV23-1A0A0A0MS06 115 aa7.21□□□□□ -1.26
HDAC9-205ENST00000411993 FAM47E-STBD1D6RA91 191 aa7.21□□□□□ -1.26
HDAC9-205ENST00000411993 DDX3XO00571 662 aaKnown RBP eCLIP7.21□□□□□ -1.26
HDAC9-205ENST00000411993 CYP7B1O75881 506 aa7.21□□□□□ -1.26
HDAC9-205ENST00000411993 SUMO1P63165 101 aaKnown RBP7.21□□□□□ -1.26
HDAC9-205ENST00000411993 SKOR2Q2VWA4 1001 aaPredicted RBP7.21□□□□□ -1.26
HDAC9-205ENST00000411993 MCTP2Q6DN12 878 aa7.21□□□□□ -1.26
HDAC9-205ENST00000411993 SCUBE1Q8IWY4 988 aa7.21□□□□□ -1.26
HDAC9-205ENST00000411993 TTLL11Q8NHH1 800 aa7.21□□□□□ -1.26
HDAC9-205ENST00000411993 CROTQ9UKG9 612 aa7.21□□□□□ -1.26
HDAC9-205ENST00000411993 TRAF6Q9Y4K3 522 aa7.21□□□□□ -1.26
HDAC9-205ENST00000411993 AQP7O14520 342 aa7.2□□□□□ -1.26
HDAC9-205ENST00000411993 ADCY3O60266 1144 aa7.2□□□□□ -1.26
HDAC9-205ENST00000411993 DIAPH1O60610 1272 aaKnown RBP7.2□□□□□ -1.26
HDAC9-205ENST00000411993 KIAA2012Q0VF49 1180 aa7.2□□□□□ -1.26
HDAC9-205ENST00000411993 TUSC3Q13454 348 aa7.2□□□□□ -1.26
HDAC9-205ENST00000411993 PRR31Q5SQ13 230 aa7.2□□□□□ -1.26
HDAC9-205ENST00000411993 BORAQ6PGQ7 559 aa7.2□□□□□ -1.26
HDAC9-205ENST00000411993 MAMDC2Q7Z304 686 aaPredicted RBP7.2□□□□□ -1.26
HDAC9-205ENST00000411993 MTDHQ86UE4 582 aaKnown RBP7.2□□□□□ -1.26
HDAC9-205ENST00000411993 ZBTB38Q8NAP3 1195 aaPredicted RBP7.2□□□□□ -1.26
HDAC9-205ENST00000411993 TXNDC5Q8NBS9 432 aaKnown RBP7.2□□□□□ -1.26
HDAC9-205ENST00000411993 UHMK1Q8TAS1 419 aaKnown RBP7.2□□□□□ -1.26
HDAC9-205ENST00000411993 IPPKQ9H8X2 491 aa7.2□□□□□ -1.26
HDAC9-205ENST00000411993 L2HGDHQ9H9P8 463 aa7.2□□□□□ -1.26
HDAC9-205ENST00000411993 DUSP10Q9Y6W6 482 aa7.2□□□□□ -1.26
HDAC9-205ENST00000411993 ASXL2Q76L83 1435 aa7.19□□□□□ -1.26
HDAC9-205ENST00000411993 MROH6A6NGR9 719 aa7.19□□□□□ -1.26
HDAC9-205ENST00000411993 CYP1A1P04798 512 aaPredicted RBP7.19□□□□□ -1.26
HDAC9-205ENST00000411993 FAM209AQ5JX71 171 aa7.19□□□□□ -1.26
HDAC9-205ENST00000411993 VASNQ6EMK4 673 aa7.19□□□□□ -1.26
HDAC9-205ENST00000411993 PRRT2Q7Z6L0 340 aaPredicted RBP7.19□□□□□ -1.26
HDAC9-205ENST00000411993 RBM12BQ8IXT5 1001 aaKnown RBP7.19□□□□□ -1.26
HDAC9-205ENST00000411993 DEPDC7Q96QD5 511 aa7.19□□□□□ -1.26
HDAC9-205ENST00000411993 DSEQ9UL01 958 aa7.19□□□□□ -1.26
HDAC9-205ENST00000411993 NKRFO15226 690 aaKnown RBP eCLIP7.18□□□□□ -1.26
HDAC9-205ENST00000411993 LTFP02788 710 aa7.18□□□□□ -1.26
HDAC9-205ENST00000411993 ZNF28P17035 718 aa7.18□□□□□ -1.26
HDAC9-205ENST00000411993 SF3A1Q15459 793 aaKnown RBP7.18□□□□□ -1.26
HDAC9-205ENST00000411993 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-205ENST00000411993 CLEC4DQ8WXI8 215 aa7.18□□□□□ -1.26
HDAC9-205ENST00000411993 PTPRN2Q92932 1015 aa7.18□□□□□ -1.26
HDAC9-205ENST00000411993 LCORQ96JN0 433 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-205ENST00000411993 KRTAP4-11Q9BYQ6 195 aa7.18□□□□□ -1.26
HDAC9-205ENST00000411993 RBPJLQ9UBG7 517 aa7.18□□□□□ -1.26
HDAC9-205ENST00000411993 KDM2BQ8NHM5 1336 aa7.18□□□□□ -1.26
HDAC9-205ENST00000411993 K7ESM1 405 aa7.17□□□□□ -1.26
HDAC9-205ENST00000411993 FAM153BP0C7A2 387 aa7.17□□□□□ -1.26
HDAC9-205ENST00000411993 IL13P35225 146 aa7.17□□□□□ -1.26
HDAC9-205ENST00000411993 PAK1Q13153 545 aa7.17□□□□□ -1.26
HDAC9-205ENST00000411993 SERINC3Q13530 473 aa7.17□□□□□ -1.26
HDAC9-205ENST00000411993 RASA3Q14644 834 aa7.17□□□□□ -1.26
HDAC9-205ENST00000411993 PAN2Q504Q3 1202 aaKnown RBP7.17□□□□□ -1.26
HDAC9-205ENST00000411993 TRMT10BQ6PF06 316 aaKnown RBP7.17□□□□□ -1.26
HDAC9-205ENST00000411993 LGI4Q8N135 537 aa7.17□□□□□ -1.26
HDAC9-205ENST00000411993 TMEM168Q9H0V1 697 aa7.17□□□□□ -1.26
HDAC9-205ENST00000411993 C9orf118A6NHY6 69 aa7.16□□□□□ -1.26
HDAC9-205ENST00000411993 FAHP16930 419 aa7.16□□□□□ -1.26
HDAC9-205ENST00000411993 NAT1P18440 290 aa7.16□□□□□ -1.26
HDAC9-205ENST00000411993 GABREP78334 506 aa7.16□□□□□ -1.26
HDAC9-205ENST00000411993 GUCY1A3Q02108 690 aa7.16□□□□□ -1.26
HDAC9-205ENST00000411993 HABP4Q5JVS0 413 aaKnown RBP7.16□□□□□ -1.26
HDAC9-205ENST00000411993 FOXB2Q5VYV0 432 aa7.16□□□□□ -1.26
HDAC9-205ENST00000411993 KCTD1Q719H9 257 aa7.16□□□□□ -1.26
HDAC9-205ENST00000411993 LRP10Q7Z4F1 713 aa7.16□□□□□ -1.26
HDAC9-205ENST00000411993 PMFBP1Q8TBY8 1022 aa7.16□□□□□ -1.26
HDAC9-205ENST00000411993 EXOC2Q96KP1 924 aa7.16□□□□□ -1.26
HDAC9-205ENST00000411993 SRPK1Q96SB4 655 aaKnown RBP7.16□□□□□ -1.26
HDAC9-205ENST00000411993 DLL4Q9NR61 685 aa7.16□□□□□ -1.26
HDAC9-205ENST00000411993 SNTG2Q9NY99 539 aa7.16□□□□□ -1.26
HDAC9-205ENST00000411993 HSPBP1Q9NZL4 362 aa7.16□□□□□ -1.26
HDAC9-205ENST00000411993 FTSJ1Q9UET6 329 aa7.16□□□□□ -1.26
HDAC9-205ENST00000411993 APPP05067 770 aa7.15□□□□□ -1.26
HDAC9-205ENST00000411993 MLLT6P55198 1093 aaPredicted RBP7.15□□□□□ -1.26
HDAC9-205ENST00000411993 RBL2Q08999 1139 aa7.15□□□□□ -1.26
HDAC9-205ENST00000411993 SOGA3Q5TF21 947 aa7.15□□□□□ -1.26
HDAC9-205ENST00000411993 ZCCHC14Q8WYQ9 949 aaKnown RBP7.15□□□□□ -1.26
HDAC9-205ENST00000411993 DHRS4Q9BTZ2 278 aa7.15□□□□□ -1.26
HDAC9-205ENST00000411993 CD244Q9BZW8 370 aa7.15□□□□□ -1.26
HDAC9-205ENST00000411993 CATSPERZQ9NTU4 200 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms