RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 SMIM10L2BP0DMW5 78 aa16.51■□□□□ 0.23
HLA-DQB2-229ENST00000411527 KCNA5P22460 613 aa16.51■□□□□ 0.23
HLA-DQB2-229ENST00000411527 MKRN4PQ13434 485 aaPredicted RBP16.51■□□□□ 0.23
HLA-DQB2-229ENST00000411527 SLC35G1Q2M3R5 365 aa16.51■□□□□ 0.23
HLA-DQB2-229ENST00000411527 LEXMQ3ZCV2 418 aa16.51■□□□□ 0.23
HLA-DQB2-229ENST00000411527 SEPT8Q92599 483 aa16.51■□□□□ 0.23
HLA-DQB2-229ENST00000411527 IL25Q9H293 177 aa16.51■□□□□ 0.23
HLA-DQB2-229ENST00000411527 RNPEPQ9H4A4 650 aa16.51■□□□□ 0.23
HLA-DQB2-229ENST00000411527 RIOX1Q9H6W3 641 aa16.51■□□□□ 0.23
HLA-DQB2-229ENST00000411527 DOCK5Q9H7D0 1870 aa16.5■□□□□ 0.23
HLA-DQB2-229ENST00000411527 FAM86C2PA6NEL3 165 aa16.5■□□□□ 0.23
HLA-DQB2-229ENST00000411527 PI4K2BG5E9Z4 385 aa16.5■□□□□ 0.23
HLA-DQB2-229ENST00000411527 NOP56O00567 594 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB2-229ENST00000411527 UPP2O95045 317 aa16.5■□□□□ 0.23
HLA-DQB2-229ENST00000411527 TRDNQ13061 729 aa16.5■□□□□ 0.23
HLA-DQB2-229ENST00000411527 GRM4Q14833 912 aa16.5■□□□□ 0.23
HLA-DQB2-229ENST00000411527 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB2-229ENST00000411527 SP7Q8TDD2 431 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB2-229ENST00000411527 MRPL38Q96DV4 380 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB2-229ENST00000411527 USP26Q9BXU7 913 aa16.5■□□□□ 0.23
HLA-DQB2-229ENST00000411527 OSBPL7Q9BZF2 842 aa16.5■□□□□ 0.23
HLA-DQB2-229ENST00000411527 C11orf16Q9NQ32 467 aa16.5■□□□□ 0.23
HLA-DQB2-229ENST00000411527 ARIH1Q9Y4X5 557 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB2-229ENST00000411527 PNMA6FA0A0J9YX94 578 aa16.49■□□□□ 0.23
HLA-DQB2-229ENST00000411527 IFIT3O14879 490 aaKnown RBP16.49■□□□□ 0.23
HLA-DQB2-229ENST00000411527 CTSHP09668 335 aa16.49■□□□□ 0.23
HLA-DQB2-229ENST00000411527 HOXC8P31273 242 aa16.49■□□□□ 0.23
HLA-DQB2-229ENST00000411527 PTPROQ16827 1216 aa16.49■□□□□ 0.23
HLA-DQB2-229ENST00000411527 GNPTABQ3T906 1256 aa16.49■□□□□ 0.23
HLA-DQB2-229ENST00000411527 EPC2Q52LR7 807 aa16.49■□□□□ 0.23
HLA-DQB2-229ENST00000411527 CYFIP1Q7L576 1253 aa16.49■□□□□ 0.23
HLA-DQB2-229ENST00000411527 FAM178BQ8IXR5 827 aa16.49■□□□□ 0.23
HLA-DQB2-229ENST00000411527 TOP1MTQ969P6 601 aa16.49■□□□□ 0.23
HLA-DQB2-229ENST00000411527 SAMD11Q96NU1 681 aa16.49■□□□□ 0.23
HLA-DQB2-229ENST00000411527 YME1L1Q96TA2 773 aa16.49■□□□□ 0.23
HLA-DQB2-229ENST00000411527 SETD4Q9NVD3 440 aa16.49■□□□□ 0.23
HLA-DQB2-229ENST00000411527 RTEL1Q9NZ71 1219 aa16.49■□□□□ 0.23
HLA-DQB2-229ENST00000411527 NLRC5Q86WI3 1866 aa16.48■□□□□ 0.23
HLA-DQB2-229ENST00000411527 ERICH2A1L162 156 aa16.48■□□□□ 0.23
HLA-DQB2-229ENST00000411527 SPATA31C2B4DYI2 1134 aa16.48■□□□□ 0.23
HLA-DQB2-229ENST00000411527 CYTH3O43739 400 aa16.48■□□□□ 0.23
HLA-DQB2-229ENST00000411527 IL9P15248 144 aa16.48■□□□□ 0.23
HLA-DQB2-229ENST00000411527 ICAM3P32942 547 aa16.48■□□□□ 0.23
HLA-DQB2-229ENST00000411527 MRPS9P82933 396 aaKnown RBP16.48■□□□□ 0.23
HLA-DQB2-229ENST00000411527 GPM6BQ13491 265 aa16.48■□□□□ 0.23
HLA-DQB2-229ENST00000411527 NEDD9Q14511 834 aa16.48■□□□□ 0.23
HLA-DQB2-229ENST00000411527 PTCRAQ6ISU1 281 aaPredicted RBP16.48■□□□□ 0.23
HLA-DQB2-229ENST00000411527 GJD3Q8N144 294 aa16.48■□□□□ 0.23
HLA-DQB2-229ENST00000411527 SENP2Q9HC62 589 aa16.48■□□□□ 0.23
HLA-DQB2-229ENST00000411527 KAT6AQ92794 2004 aa16.47■□□□□ 0.23
HLA-DQB2-229ENST00000411527 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.47■□□□□ 0.23
HLA-DQB2-229ENST00000411527 H3BNC9 293 aa16.47■□□□□ 0.23
HLA-DQB2-229ENST00000411527 CAND2O75155 1236 aa16.47■□□□□ 0.23
HLA-DQB2-229ENST00000411527 STAM2O75886 525 aa16.47■□□□□ 0.23
HLA-DQB2-229ENST00000411527 GNAT1P11488 350 aa16.47■□□□□ 0.23
HLA-DQB2-229ENST00000411527 SSTR3P32745 418 aaPredicted RBP16.47■□□□□ 0.23
HLA-DQB2-229ENST00000411527 UTP14CQ5TAP6 766 aaKnown RBP16.47■□□□□ 0.23
HLA-DQB2-229ENST00000411527 METTL7BQ6UX53 244 aa16.47■□□□□ 0.23
HLA-DQB2-229ENST00000411527 TMEM192Q8IY95 271 aa16.47■□□□□ 0.23
HLA-DQB2-229ENST00000411527 PIBF1Q8WXW3 757 aa16.47■□□□□ 0.23
HLA-DQB2-229ENST00000411527 INPP4AQ96PE3 977 aaPredicted RBP16.47■□□□□ 0.23
HLA-DQB2-229ENST00000411527 GPR20Q99678 358 aa16.47■□□□□ 0.23
HLA-DQB2-229ENST00000411527 GRXCR2A6NFK2 248 aa16.46■□□□□ 0.23
HLA-DQB2-229ENST00000411527 FIBPO43427 364 aa16.46■□□□□ 0.23
HLA-DQB2-229ENST00000411527 CYP21A2P08686 494 aa16.46■□□□□ 0.23
HLA-DQB2-229ENST00000411527 HOXD11P31277 338 aaPredicted RBP16.46■□□□□ 0.23
HLA-DQB2-229ENST00000411527 TROAPQ12815 778 aa16.46■□□□□ 0.23
HLA-DQB2-229ENST00000411527 WTAPQ15007 396 aa16.46■□□□□ 0.23
HLA-DQB2-229ENST00000411527 TRIM50Q86XT4 487 aa16.46■□□□□ 0.23
HLA-DQB2-229ENST00000411527 BANK1Q8NDB2 785 aa16.46■□□□□ 0.23
HLA-DQB2-229ENST00000411527 IFIH1Q9BYX4 1025 aaKnown RBP16.46■□□□□ 0.23
HLA-DQB2-229ENST00000411527 TELO2Q9Y4R8 837 aa16.46■□□□□ 0.23
HLA-DQB2-229ENST00000411527 U3KPZ7 1027 aaPredicted RBP16.46■□□□□ 0.23
HLA-DQB2-229ENST00000411527 H3BQ06 376 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB2-229ENST00000411527 ARHGAP4P98171 946 aa16.45■□□□□ 0.22
HLA-DQB2-229ENST00000411527 SP4Q02446 784 aa16.45■□□□□ 0.22
HLA-DQB2-229ENST00000411527 SEMA3FQ13275 785 aa16.45■□□□□ 0.22
HLA-DQB2-229ENST00000411527 SART3Q15020 963 aaKnown RBP16.45■□□□□ 0.22
HLA-DQB2-229ENST00000411527 PUS10Q3MIT2 529 aaKnown RBP16.45■□□□□ 0.22
HLA-DQB2-229ENST00000411527 TIGD5Q53EQ6 642 aa16.45■□□□□ 0.22
HLA-DQB2-229ENST00000411527 EP400NLQ6ZTU2 488 aa16.45■□□□□ 0.22
HLA-DQB2-229ENST00000411527 RALYLQ86SE5 291 aaKnown RBP16.45■□□□□ 0.22
HLA-DQB2-229ENST00000411527 EXOC6Q8TAG9 804 aa16.45■□□□□ 0.22
HLA-DQB2-229ENST00000411527 NEK9Q8TD19 979 aa16.45■□□□□ 0.22
HLA-DQB2-229ENST00000411527 APBB2Q92870 758 aa16.45■□□□□ 0.22
HLA-DQB2-229ENST00000411527 ZNF215Q9UL58 517 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB2-229ENST00000411527 FRMPD4Q14CM0 1322 aa16.45■□□□□ 0.22
HLA-DQB2-229ENST00000411527 RALGAPA2Q2PPJ7 1873 aa16.44■□□□□ 0.22
HLA-DQB2-229ENST00000411527 ADAM17P78536 824 aa16.44■□□□□ 0.22
HLA-DQB2-229ENST00000411527 PTH1RQ03431 593 aa16.44■□□□□ 0.22
HLA-DQB2-229ENST00000411527 TCEAL5Q5H9L2 206 aa16.44■□□□□ 0.22
HLA-DQB2-229ENST00000411527 FAM26DQ5JW98 314 aa16.44■□□□□ 0.22
HLA-DQB2-229ENST00000411527 CATIPQ7Z7H3 387 aa16.44■□□□□ 0.22
HLA-DQB2-229ENST00000411527 NCOA7Q8NI08 942 aa16.44■□□□□ 0.22
HLA-DQB2-229ENST00000411527 SMARCC2Q8TAQ2 1214 aa16.44■□□□□ 0.22
HLA-DQB2-229ENST00000411527 LMBR1Q8WVP7 490 aa16.44■□□□□ 0.22
HLA-DQB2-229ENST00000411527 SUPT16HQ9Y5B9 1047 aaKnown RBP16.44■□□□□ 0.22
HLA-DQB2-229ENST00000411527 E7EWF7 191 aa16.43■□□□□ 0.22
HLA-DQB2-229ENST00000411527 PCNX4Q63HM2 1172 aa16.43■□□□□ 0.22
HLA-DQB2-229ENST00000411527 USP17L6PQ6QN14 398 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms