RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 INF2Q27J81 1249 aa27.13■■□□□ 1.93
UBE2E3-202ENST00000410062 C1orf53Q5VUE5 145 aa27.13■■□□□ 1.93
UBE2E3-202ENST00000410062 PIK3AP1Q6ZUJ8 805 aa27.13■■□□□ 1.93
UBE2E3-202ENST00000410062 NIPA1Q7RTP0 329 aa27.13■■□□□ 1.93
UBE2E3-202ENST00000410062 GIMAP8Q8ND71 665 aaPredicted RBP27.13■■□□□ 1.93
UBE2E3-202ENST00000410062 UIMC1Q96RL1 719 aa27.13■■□□□ 1.93
UBE2E3-202ENST00000410062 MTG1Q9BT17 334 aaPredicted RBP27.13■■□□□ 1.93
UBE2E3-202ENST00000410062 AGO4Q9HCK5 861 aaKnown RBP27.13■■□□□ 1.93
UBE2E3-202ENST00000410062 A0A0U1RQG5 324 aaPredicted RBP27.12■■□□□ 1.93
UBE2E3-202ENST00000410062 BTBD18B2RXH4 712 aa27.12■■□□□ 1.93
UBE2E3-202ENST00000410062 NOP56O00567 594 aaKnown RBP27.12■■□□□ 1.93
UBE2E3-202ENST00000410062 KPNA6O60684 536 aa27.12■■□□□ 1.93
UBE2E3-202ENST00000410062 PRR16Q569H4 304 aa27.12■■□□□ 1.93
UBE2E3-202ENST00000410062 EARS2Q5JPH6 523 aaKnown RBP27.12■■□□□ 1.93
UBE2E3-202ENST00000410062 DIS3L2Q8IYB7 885 aaKnown RBP27.12■■□□□ 1.93
UBE2E3-202ENST00000410062 GRIN2DO15399 1336 aa27.12■■□□□ 1.93
UBE2E3-202ENST00000410062 ITGA7Q13683 1181 aa27.11■■□□□ 1.93
UBE2E3-202ENST00000410062 TNFRSF25Q93038 417 aa27.11■■□□□ 1.93
UBE2E3-202ENST00000410062 FAM205CA6NFA0 338 aa27.1■■□□□ 1.93
UBE2E3-202ENST00000410062 ARVCFO00192 962 aa27.1■■□□□ 1.93
UBE2E3-202ENST00000410062 PQBP1O60828 265 aaKnown RBP27.1■■□□□ 1.93
UBE2E3-202ENST00000410062 ZNF286BP0CG31 522 aa27.1■■□□□ 1.93
UBE2E3-202ENST00000410062 CHMP4BP1P59074 171 aa27.1■■□□□ 1.93
UBE2E3-202ENST00000410062 ITGB3BPQ13352 177 aaPredicted RBP27.1■■□□□ 1.93
UBE2E3-202ENST00000410062 PPP1R13LQ8WUF5 828 aa27.1■■□□□ 1.93
UBE2E3-202ENST00000410062 GPR20Q99678 358 aa27.1■■□□□ 1.93
UBE2E3-202ENST00000410062 PPFIA4O75335 1185 aa27.09■■□□□ 1.93
UBE2E3-202ENST00000410062 HOXD8P13378 290 aaPredicted RBP27.09■■□□□ 1.93
UBE2E3-202ENST00000410062 GJB2P29033 226 aa27.09■■□□□ 1.93
UBE2E3-202ENST00000410062 SETQ01105 290 aaPredicted RBP27.09■■□□□ 1.93
UBE2E3-202ENST00000410062 TLE2Q04725 743 aa27.09■■□□□ 1.93
UBE2E3-202ENST00000410062 FBXO18Q8NFZ0 1043 aa27.09■■□□□ 1.93
UBE2E3-202ENST00000410062 LENG9Q96B70 501 aa27.09■■□□□ 1.93
UBE2E3-202ENST00000410062 NR2E3Q9Y5X4 410 aa27.09■■□□□ 1.93
UBE2E3-202ENST00000410062 TDP2O95551 362 aa27.09■■□□□ 1.93
UBE2E3-202ENST00000410062 CDK7P50613 346 aa27.09■■□□□ 1.93
UBE2E3-202ENST00000410062 KAT2BQ92831 832 aa27.09■■□□□ 1.93
UBE2E3-202ENST00000410062 SDF4Q9BRK5 362 aa27.09■■□□□ 1.93
UBE2E3-202ENST00000410062 PCDH10Q9P2E7 1040 aa27.09■■□□□ 1.93
UBE2E3-202ENST00000410062 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.09■■□□□ 1.93
UBE2E3-202ENST00000410062 SCN10AQ9Y5Y9 1956 aa27.09■■□□□ 1.93
UBE2E3-202ENST00000410062 CUL4AQ13619 759 aa27.08■■□□□ 1.93
UBE2E3-202ENST00000410062 SAFBQ15424 915 aaKnown RBP eCLIP27.08■■□□□ 1.93
UBE2E3-202ENST00000410062 LETM2Q2VYF4 491 aa27.08■■□□□ 1.93
UBE2E3-202ENST00000410062 SLC43A3Q8NBI5 491 aa27.08■■□□□ 1.93
UBE2E3-202ENST00000410062 ZNF577Q9BSK1 485 aa27.08■■□□□ 1.93
UBE2E3-202ENST00000410062 JPH1Q9HDC5 661 aaPredicted RBP27.08■■□□□ 1.93
UBE2E3-202ENST00000410062 SMC3Q9UQE7 1217 aa27.08■■□□□ 1.93
UBE2E3-202ENST00000410062 CEP290O15078 2479 aa27.08■■□□□ 1.93
UBE2E3-202ENST00000410062 NFASCO94856 1347 aa27.08■■□□□ 1.93
UBE2E3-202ENST00000410062 H0YGN5 161 aa27.07■■□□□ 1.92
UBE2E3-202ENST00000410062 IPO5O00410 1097 aaKnown RBP27.07■■□□□ 1.92
UBE2E3-202ENST00000410062 NBPF20Q3BBV1 942 aa27.07■■□□□ 1.92
UBE2E3-202ENST00000410062 NEK8Q86SG6 692 aa27.07■■□□□ 1.92
UBE2E3-202ENST00000410062 SLC9A2Q9UBY0 812 aa27.07■■□□□ 1.92
UBE2E3-202ENST00000410062 ZMYND8Q9ULU4 1186 aaPredicted RBP27.07■■□□□ 1.92
UBE2E3-202ENST00000410062 DDX39AO00148 427 aaKnown RBP27.06■■□□□ 1.92
UBE2E3-202ENST00000410062 SYN1P17600 705 aa27.06■■□□□ 1.92
UBE2E3-202ENST00000410062 ANKRD33Q7Z3H0 272 aa27.06■■□□□ 1.92
UBE2E3-202ENST00000410062 KIF3AQ9Y496 699 aa27.06■■□□□ 1.92
UBE2E3-202ENST00000410062 CYP3A7-CYP3A51PA0A087WV96 503 aa27.05■■□□□ 1.92
UBE2E3-202ENST00000410062 K7ELQ4 463 aaPredicted RBP27.05■■□□□ 1.92
UBE2E3-202ENST00000410062 F2P00734 622 aa27.05■■□□□ 1.92
UBE2E3-202ENST00000410062 LGALS2P05162 132 aa27.05■■□□□ 1.92
UBE2E3-202ENST00000410062 CYP3A7P24462 503 aa27.05■■□□□ 1.92
UBE2E3-202ENST00000410062 C16orf70Q9BSU1 422 aa27.05■■□□□ 1.92
UBE2E3-202ENST00000410062 GSTTP1A0A1W2PQM5 241 aa27.05■■□□□ 1.92
UBE2E3-202ENST00000410062 MSH4O15457 936 aa27.05■■□□□ 1.92
UBE2E3-202ENST00000410062 DHX15O43143 795 aaKnown RBP27.05■■□□□ 1.92
UBE2E3-202ENST00000410062 TCF7P36402 384 aaPredicted RBP27.05■■□□□ 1.92
UBE2E3-202ENST00000410062 Q4G0T1 1027 aa27.05■■□□□ 1.92
UBE2E3-202ENST00000410062 FAM47CQ5HY64 1035 aa27.05■■□□□ 1.92
UBE2E3-202ENST00000410062 UTP14CQ5TAP6 766 aaKnown RBP27.05■■□□□ 1.92
UBE2E3-202ENST00000410062 MOXD1Q6UVY6 613 aa27.05■■□□□ 1.92
UBE2E3-202ENST00000410062 SNX21Q969T3 373 aa27.05■■□□□ 1.92
UBE2E3-202ENST00000410062 TOX2Q96NM4 488 aa27.05■■□□□ 1.92
UBE2E3-202ENST00000410062 MROH7Q68CQ1 1323 aa27.05■■□□□ 1.92
UBE2E3-202ENST00000410062 DCDC2CA8MYV0 355 aa27.04■■□□□ 1.92
UBE2E3-202ENST00000410062 PSEN2P49810 448 aa27.04■■□□□ 1.92
UBE2E3-202ENST00000410062 TRIM50Q86XT4 487 aa27.04■■□□□ 1.92
UBE2E3-202ENST00000410062 FAM126BQ8IXS8 530 aa27.04■■□□□ 1.92
UBE2E3-202ENST00000410062 SEPT1Q8WYJ6 367 aa27.04■■□□□ 1.92
UBE2E3-202ENST00000410062 GJA10Q969M2 543 aa27.04■■□□□ 1.92
UBE2E3-202ENST00000410062 MBOAT7Q96N66 472 aa27.04■■□□□ 1.92
UBE2E3-202ENST00000410062 PRDM5Q9NQX1 630 aaPredicted RBP27.04■■□□□ 1.92
UBE2E3-202ENST00000410062 DDX25Q9UHL0 483 aaKnown RBP27.04■■□□□ 1.92
UBE2E3-202ENST00000410062 SLC37A4O43826 429 aa27.03■■□□□ 1.92
UBE2E3-202ENST00000410062 CCNT1O60563 726 aaKnown RBP27.03■■□□□ 1.92
UBE2E3-202ENST00000410062 FAAP100Q0VG06 881 aa27.03■■□□□ 1.92
UBE2E3-202ENST00000410062 MFSD10Q14728 455 aa27.03■■□□□ 1.92
UBE2E3-202ENST00000410062 KIAA0753Q2KHM9 967 aa27.03■■□□□ 1.92
UBE2E3-202ENST00000410062 SH3RF1Q7Z6J0 888 aa27.03■■□□□ 1.92
UBE2E3-202ENST00000410062 KATNAL1Q9BW62 490 aa27.03■■□□□ 1.92
UBE2E3-202ENST00000410062 CCNE2O96020 404 aa27.02■■□□□ 1.92
UBE2E3-202ENST00000410062 CLTBP09497 229 aa27.02■■□□□ 1.92
UBE2E3-202ENST00000410062 ACTR2P61160 394 aa27.02■■□□□ 1.92
UBE2E3-202ENST00000410062 NFRKBQ6P4R8 1299 aa27.02■■□□□ 1.92
UBE2E3-202ENST00000410062 SEZ6LQ9BYH1 1024 aa27.02■■□□□ 1.92
UBE2E3-202ENST00000410062 TRPV6Q9H1D0 765 aa27.02■■□□□ 1.92
UBE2E3-202ENST00000410062 FOXP1Q9H334 677 aaPredicted RBP27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms