RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 ARHGAP1Q07960 439 aa16.25■□□□□ 0.19
LIMS2-209ENST00000410038 NEDD9Q14511 834 aa16.25■□□□□ 0.19
LIMS2-209ENST00000410038 FOXD4L6Q3SYB3 417 aaPredicted RBP16.25■□□□□ 0.19
LIMS2-209ENST00000410038 CELF3Q5SZQ8 465 aaKnown RBP16.25■□□□□ 0.19
LIMS2-209ENST00000410038 FOXD4L3Q6VB84 417 aaPredicted RBP16.25■□□□□ 0.19
LIMS2-209ENST00000410038 TLK2Q86UE8 772 aa16.25■□□□□ 0.19
LIMS2-209ENST00000410038 DHX37Q8IY37 1157 aaKnown RBP16.25■□□□□ 0.19
LIMS2-209ENST00000410038 GIMAP8Q8ND71 665 aaPredicted RBP16.25■□□□□ 0.19
LIMS2-209ENST00000410038 HAS1Q92839 578 aa16.25■□□□□ 0.19
LIMS2-209ENST00000410038 SLC5A5Q92911 643 aa16.25■□□□□ 0.19
LIMS2-209ENST00000410038 GJA10Q969M2 543 aa16.25■□□□□ 0.19
LIMS2-209ENST00000410038 FTOQ9C0B1 505 aaKnown RBP eCLIP16.25■□□□□ 0.19
LIMS2-209ENST00000410038 NFASCO94856 1347 aa16.25■□□□□ 0.19
LIMS2-209ENST00000410038 TBX3O15119 743 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 DHX15O43143 795 aaKnown RBP16.24■□□□□ 0.19
LIMS2-209ENST00000410038 DYNC1LI2O43237 492 aaPredicted RBP16.24■□□□□ 0.19
LIMS2-209ENST00000410038 SORBS3O60504 671 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 FARP2O94887 1054 aaPredicted RBP16.24■□□□□ 0.19
LIMS2-209ENST00000410038 CALCRLQ16602 461 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 CYFIP1Q7L576 1253 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 C4orf32Q8N8J7 132 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 FAM20AQ96MK3 541 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 DEFB118Q96PH6 123 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 MTMR9Q96QG7 549 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 XPNPEP3Q9NQH7 507 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 Q9Y3F1 56 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 SYNRGQ9UMZ2 1314 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 IRX5P78411 483 aaPredicted RBP16.24■□□□□ 0.19
LIMS2-209ENST00000410038 PTGDRQ13258 359 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 SF3A1Q15459 793 aaKnown RBP16.24■□□□□ 0.19
LIMS2-209ENST00000410038 METTL7BQ6UX53 244 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 OR6J1Q8NGC5 347 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 EMID1Q96A84 441 aaPredicted RBP16.24■□□□□ 0.19
LIMS2-209ENST00000410038 USP28Q96RU2 1077 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 RIT2Q99578 217 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 SDF4Q9BRK5 362 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 MLXIPQ9HAP2 919 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 TBC1D22BQ9NU19 505 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 CHMP5Q9NZZ3 219 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 CLIC4Q9Y696 253 aa16.24■□□□□ 0.19
LIMS2-209ENST00000410038 ADAMTS4O75173 837 aa16.23■□□□□ 0.19
LIMS2-209ENST00000410038 PSMD10O75832 226 aa16.23■□□□□ 0.19
LIMS2-209ENST00000410038 PGK1P00558 417 aa16.23■□□□□ 0.19
LIMS2-209ENST00000410038 GJB1P08034 283 aa16.23■□□□□ 0.19
LIMS2-209ENST00000410038 GJA9P57773 515 aa16.23■□□□□ 0.19
LIMS2-209ENST00000410038 LAMC2Q13753 1193 aa16.23■□□□□ 0.19
LIMS2-209ENST00000410038 LRCH2Q5VUJ6 765 aa16.23■□□□□ 0.19
LIMS2-209ENST00000410038 SLFN12Q8IYM2 578 aa16.23■□□□□ 0.19
LIMS2-209ENST00000410038 AP5M1Q9H0R1 490 aa16.23■□□□□ 0.19
LIMS2-209ENST00000410038 UPF3AQ9H1J1 476 aaKnown RBP16.23■□□□□ 0.19
LIMS2-209ENST00000410038 TELO2Q9Y4R8 837 aa16.23■□□□□ 0.19
LIMS2-209ENST00000410038 MYH9P35579 1960 aaKnown RBP16.22■□□□□ 0.19
LIMS2-209ENST00000410038 DDX39AO00148 427 aaKnown RBP16.22■□□□□ 0.19
LIMS2-209ENST00000410038 CTAGE5O15320 804 aa16.22■□□□□ 0.19
LIMS2-209ENST00000410038 MARCH6O60337 910 aa16.22■□□□□ 0.19
LIMS2-209ENST00000410038 GAS7O60861 476 aa16.22■□□□□ 0.19
LIMS2-209ENST00000410038 BAG4O95429 457 aaKnown RBP16.22■□□□□ 0.19
LIMS2-209ENST00000410038 OR52Z1P0C646 297 aa16.22■□□□□ 0.19
LIMS2-209ENST00000410038 ATP2C1P98194 919 aaPredicted RBP16.22■□□□□ 0.19
LIMS2-209ENST00000410038 CEBPZQ03701 1054 aaKnown RBP16.22■□□□□ 0.19
LIMS2-209ENST00000410038 DNM1Q05193 864 aaKnown RBP16.22■□□□□ 0.19
LIMS2-209ENST00000410038 HSDL1Q3SXM5 330 aa16.22■□□□□ 0.19
LIMS2-209ENST00000410038 SPATA33Q96N06 139 aa16.22■□□□□ 0.19
LIMS2-209ENST00000410038 ZNF396Q96N95 335 aaPredicted RBP16.22■□□□□ 0.19
LIMS2-209ENST00000410038 JPH1Q9HDC5 661 aaPredicted RBP16.22■□□□□ 0.19
LIMS2-209ENST00000410038 TFIP11Q9UBB9 837 aaKnown RBP16.22■□□□□ 0.19
LIMS2-209ENST00000410038 SLC9A2Q9UBY0 812 aa16.22■□□□□ 0.19
LIMS2-209ENST00000410038 MYADML2A6NDP7 307 aa16.21■□□□□ 0.19
LIMS2-209ENST00000410038 LAD1O00515 517 aa16.21■□□□□ 0.19
LIMS2-209ENST00000410038 C6orf222P0C671 652 aaPredicted RBP16.21■□□□□ 0.19
LIMS2-209ENST00000410038 TXKP42681 527 aa16.21■□□□□ 0.19
LIMS2-209ENST00000410038 NKX3-2P78367 333 aa16.21■□□□□ 0.19
LIMS2-209ENST00000410038 SP4Q02446 784 aa16.21■□□□□ 0.19
LIMS2-209ENST00000410038 PTPAQ15257 358 aa16.21■□□□□ 0.19
LIMS2-209ENST00000410038 U2AF1L4Q8WU68 220 aaKnown RBP16.21■□□□□ 0.19
LIMS2-209ENST00000410038 AFG1LQ8WV93 481 aa16.21■□□□□ 0.19
LIMS2-209ENST00000410038 CHAMP1Q96JM3 812 aa16.21■□□□□ 0.19
LIMS2-209ENST00000410038 TEKT3Q9BXF9 490 aa16.21■□□□□ 0.19
LIMS2-209ENST00000410038 SPC25Q9HBM1 224 aa16.21■□□□□ 0.19
LIMS2-209ENST00000410038 POLR3EQ9NVU0 708 aa16.21■□□□□ 0.19
LIMS2-209ENST00000410038 ATP6V1DQ9Y5K8 247 aa16.21■□□□□ 0.19
LIMS2-209ENST00000410038 A6NJR5 290 aa16.21■□□□□ 0.18
LIMS2-209ENST00000410038 SGPL1O95470 568 aa16.21■□□□□ 0.18
LIMS2-209ENST00000410038 BMP15O95972 392 aa16.21■□□□□ 0.18
LIMS2-209ENST00000410038 CCNE2O96020 404 aa16.21■□□□□ 0.18
LIMS2-209ENST00000410038 BEX3Q00994 111 aa16.21■□□□□ 0.18
LIMS2-209ENST00000410038 FSCN1Q16658 493 aaKnown RBP16.21■□□□□ 0.18
LIMS2-209ENST00000410038 ATL3Q6DD88 541 aa16.21■□□□□ 0.18
LIMS2-209ENST00000410038 B3GNT9Q6UX72 402 aa16.21■□□□□ 0.18
LIMS2-209ENST00000410038 PPTC7Q8NI37 304 aa16.21■□□□□ 0.18
LIMS2-209ENST00000410038 CRISPLD2Q9H0B8 497 aa16.21■□□□□ 0.18
LIMS2-209ENST00000410038 TTC12Q9H892 705 aaPredicted RBP16.21■□□□□ 0.18
LIMS2-209ENST00000410038 VAV3Q9UKW4 847 aa16.21■□□□□ 0.18
LIMS2-209ENST00000410038 OGDHLQ9ULD0 1010 aa16.21■□□□□ 0.18
LIMS2-209ENST00000410038 PCDHA12Q9UN75 941 aa16.21■□□□□ 0.18
LIMS2-209ENST00000410038 CEP131Q9UPN4 1083 aa16.21■□□□□ 0.18
LIMS2-209ENST00000410038 MKI67P46013 3256 aaKnown RBP16.2■□□□□ 0.18
LIMS2-209ENST00000410038 PRPHP41219 470 aa16.2■□□□□ 0.18
LIMS2-209ENST00000410038 GJA8P48165 433 aa16.2■□□□□ 0.18
LIMS2-209ENST00000410038 NASPP49321 788 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms