RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 NEK9Q8TD19 979 aa14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 SP7Q8TDD2 431 aaPredicted RBP14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 KATNAL1Q9BW62 490 aa14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 INSL6Q9Y581 213 aa14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 TRIM6-TRIM34B2RNG4 842 aa14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 PPP1R11O60927 126 aaPredicted RBP14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 EFCAB14O75071 495 aa14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 KDM4AO75164 1064 aa14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 THPOP40225 353 aa14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 MCM2P49736 904 aa14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 EPC2Q52LR7 807 aa14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 PLEKHG4Q58EX7 1191 aa14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 SERINC5Q86VE9 423 aa14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 MCF2L2Q86YR7 1114 aa14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 STAG2Q8N3U4 1231 aa14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 IL31RAQ8NI17 732 aa14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 ANKS1AQ92625 1134 aa14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 ESR2Q92731 530 aa14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 MRPL38Q96DV4 380 aaKnown RBP14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 PDCD2LQ9BRP1 358 aa14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 C16orf70Q9BSU1 422 aa14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 MRPL11Q9Y3B7 192 aaKnown RBP14.69□□□□□ -0.06
CHRNA1-205ENST00000409542 RSPH10B2B2RC85 870 aa14.68□□□□□ -0.06
CHRNA1-205ENST00000409542 B4E1Z4 1266 aa14.68□□□□□ -0.06
CHRNA1-205ENST00000409542 RSPH10BP0C881 870 aa14.68□□□□□ -0.06
CHRNA1-205ENST00000409542 PCP11498 1178 aaKnown RBP14.68□□□□□ -0.06
CHRNA1-205ENST00000409542 MYCLP12524 364 aaPredicted RBP14.68□□□□□ -0.06
CHRNA1-205ENST00000409542 HSD17B4P51659 736 aa14.68□□□□□ -0.06
CHRNA1-205ENST00000409542 NUCB2P80303 420 aa14.68□□□□□ -0.06
CHRNA1-205ENST00000409542 CELF3Q5SZQ8 465 aaKnown RBP14.68□□□□□ -0.06
CHRNA1-205ENST00000409542 ENAHQ8N8S7 591 aaPredicted RBP14.68□□□□□ -0.06
CHRNA1-205ENST00000409542 RILPL2Q969X0 211 aa14.68□□□□□ -0.06
CHRNA1-205ENST00000409542 SPATA33Q96N06 139 aa14.68□□□□□ -0.06
CHRNA1-205ENST00000409542 MAF1Q9H063 256 aa14.68□□□□□ -0.06
CHRNA1-205ENST00000409542 KAT14Q9H8E8 782 aa14.68□□□□□ -0.06
CHRNA1-205ENST00000409542 MYO7AQ13402 2215 aa14.68□□□□□ -0.06
CHRNA1-205ENST00000409542 TRIOO75962 3097 aa14.67□□□□□ -0.06
CHRNA1-205ENST00000409542 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.67□□□□□ -0.06
CHRNA1-205ENST00000409542 TREHO43280 583 aa14.67□□□□□ -0.06
CHRNA1-205ENST00000409542 DHX16O60231 1041 aaKnown RBP14.67□□□□□ -0.06
CHRNA1-205ENST00000409542 PPFIA4O75335 1185 aa14.67□□□□□ -0.06
CHRNA1-205ENST00000409542 UPP2O95045 317 aa14.67□□□□□ -0.06
CHRNA1-205ENST00000409542 GGPS1O95749 300 aa14.67□□□□□ -0.06
CHRNA1-205ENST00000409542 AMHP03971 560 aa14.67□□□□□ -0.06
CHRNA1-205ENST00000409542 SKOR2Q2VWA4 1001 aaPredicted RBP14.67□□□□□ -0.06
CHRNA1-205ENST00000409542 TCEAL5Q5H9L2 206 aa14.67□□□□□ -0.06
CHRNA1-205ENST00000409542 UIMC1Q96RL1 719 aa14.67□□□□□ -0.06
CHRNA1-205ENST00000409542 ZSCAN10Q96SZ4 725 aaPredicted RBP14.67□□□□□ -0.06
CHRNA1-205ENST00000409542 RNF41Q9H4P4 317 aaPredicted RBP14.67□□□□□ -0.06
CHRNA1-205ENST00000409542 ZSWIM5Q9P217 1185 aa14.67□□□□□ -0.06
CHRNA1-205ENST00000409542 ATG2AQ2TAZ0 1938 aa14.66□□□□□ -0.06
CHRNA1-205ENST00000409542 FSD2A1L4K1 749 aa14.66□□□□□ -0.06
CHRNA1-205ENST00000409542 H3BNC9 293 aa14.66□□□□□ -0.06
CHRNA1-205ENST00000409542 ZNF213O14771 459 aa14.66□□□□□ -0.06
CHRNA1-205ENST00000409542 HOXA13P31271 388 aaPredicted RBP14.66□□□□□ -0.06
CHRNA1-205ENST00000409542 HOXC8P31273 242 aa14.66□□□□□ -0.06
CHRNA1-205ENST00000409542 GPM6BQ13491 265 aa14.66□□□□□ -0.06
CHRNA1-205ENST00000409542 PGM5Q15124 567 aa14.66□□□□□ -0.06
CHRNA1-205ENST00000409542 SLC35G1Q2M3R5 365 aa14.66□□□□□ -0.06
CHRNA1-205ENST00000409542 ASPRV1Q53RT3 343 aa14.66□□□□□ -0.06
CHRNA1-205ENST00000409542 VSIG10LQ86VR7 867 aa14.66□□□□□ -0.06
CHRNA1-205ENST00000409542 TOP1MTQ969P6 601 aa14.66□□□□□ -0.06
CHRNA1-205ENST00000409542 TELO2Q9Y4R8 837 aa14.66□□□□□ -0.06
CHRNA1-205ENST00000409542 PIEZO1Q92508 2521 aa14.66□□□□□ -0.06
CHRNA1-205ENST00000409542 NLRC5Q86WI3 1866 aa14.65□□□□□ -0.06
CHRNA1-205ENST00000409542 POTEB3A0JP26 581 aa14.65□□□□□ -0.06
CHRNA1-205ENST00000409542 C17orf102A2RUQ5 167 aa14.65□□□□□ -0.06
CHRNA1-205ENST00000409542 PARP1P09874 1014 aaKnown RBP14.65□□□□□ -0.06
CHRNA1-205ENST00000409542 UBA1P22314 1058 aaKnown RBP14.65□□□□□ -0.06
CHRNA1-205ENST00000409542 GHRHRQ02643 423 aa14.65□□□□□ -0.06
CHRNA1-205ENST00000409542 POTEBQ6S5H4 581 aa14.65□□□□□ -0.06
CHRNA1-205ENST00000409542 STOX1Q6ZVD7 989 aa14.65□□□□□ -0.06
CHRNA1-205ENST00000409542 TMEM192Q8IY95 271 aa14.65□□□□□ -0.06
CHRNA1-205ENST00000409542 BANK1Q8NDB2 785 aa14.65□□□□□ -0.06
CHRNA1-205ENST00000409542 ATP6V0A1Q93050 837 aa14.65□□□□□ -0.06
CHRNA1-205ENST00000409542 RNPEPQ9H4A4 650 aa14.65□□□□□ -0.06
CHRNA1-205ENST00000409542 FOXD4L1Q9NU39 408 aa14.65□□□□□ -0.06
CHRNA1-205ENST00000409542 EMSYQ7Z589 1322 aa14.65□□□□□ -0.06
CHRNA1-205ENST00000409542 LAMA4Q16363 1823 aa14.64□□□□□ -0.07
CHRNA1-205ENST00000409542 CTSHP09668 335 aa14.64□□□□□ -0.07
CHRNA1-205ENST00000409542 SMIM10L2AP0DMW4 78 aa14.64□□□□□ -0.07
CHRNA1-205ENST00000409542 SMIM10L2BP0DMW5 78 aa14.64□□□□□ -0.07
CHRNA1-205ENST00000409542 ALADP13716 330 aa14.64□□□□□ -0.07
CHRNA1-205ENST00000409542 LTBRP36941 435 aa14.64□□□□□ -0.07
CHRNA1-205ENST00000409542 ZP2Q05996 745 aa14.64□□□□□ -0.07
CHRNA1-205ENST00000409542 COL19A1Q14993 1142 aa14.64□□□□□ -0.07
CHRNA1-205ENST00000409542 EP400NLQ6ZTU2 488 aa14.64□□□□□ -0.07
CHRNA1-205ENST00000409542 IQCA1Q86XH1 822 aa14.64□□□□□ -0.07
CHRNA1-205ENST00000409542 PABPC5Q96DU9 382 aaKnown RBP14.64□□□□□ -0.07
CHRNA1-205ENST00000409542 MTMR8Q96EF0 704 aa14.64□□□□□ -0.07
CHRNA1-205ENST00000409542 ANO2Q9NQ90 1003 aa14.64□□□□□ -0.07
CHRNA1-205ENST00000409542 DOCK5Q9H7D0 1870 aa14.64□□□□□ -0.07
CHRNA1-205ENST00000409542 C19orf67A6NJJ6 358 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 GOLGA6L22H0YM25 854 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 H3BRB1 525 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 DCXO43602 365 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 LGALS2P05162 132 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 LINC00271P0C7V0 271 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 PTPROQ16827 1216 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 CCDC178Q5BJE1 867 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms