RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 NKRFO15226 690 aaKnown RBP eCLIP13.13□□□□□ -0.31
PCNX4-204ENST00000406949 CLIC2O15247 247 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 PRPF6O94906 941 aaKnown RBP13.13□□□□□ -0.31
PCNX4-204ENST00000406949 ARHGAP4P98171 946 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 KLRC3Q07444 240 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 SLC30A10Q6XR72 485 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 FUT8Q9BYC5 575 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 RABEP2Q9H5N1 569 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 PPP1R1BQ9UD71 204 aaPredicted RBP13.13□□□□□ -0.31
PCNX4-204ENST00000406949 RCCD1A6NED2 376 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 EPHB6O15197 1021 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 N4BP1O75113 896 aaKnown RBP13.13□□□□□ -0.31
PCNX4-204ENST00000406949 GCFC2P16383 781 aaKnown RBP13.13□□□□□ -0.31
PCNX4-204ENST00000406949 FXR2P51116 673 aaKnown RBP eCLIP13.13□□□□□ -0.31
PCNX4-204ENST00000406949 APBA1Q02410 837 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 ASIC2Q16515 512 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 NFRKBQ6P4R8 1299 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 SND1Q7KZF4 910 aaKnown RBP eCLIP13.13□□□□□ -0.31
PCNX4-204ENST00000406949 SYCP3Q8IZU3 236 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 ZNF507Q8TCN5 953 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 TBC1D5Q92609 795 aa13.13□□□□□ -0.31
PCNX4-204ENST00000406949 ROBO3Q96MS0 1386 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 EIF3CLB5ME19 914 aaKnown RBP13.12□□□□□ -0.31
PCNX4-204ENST00000406949 PPIP5K2O43314 1243 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 ATP8B1O43520 1251 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 PPP1R12BO60237 982 aaPredicted RBP13.12□□□□□ -0.31
PCNX4-204ENST00000406949 FTCDO95954 541 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 HLTFQ14527 1009 aaKnown RBP eCLIP13.12□□□□□ -0.31
PCNX4-204ENST00000406949 CRY2Q49AN0 593 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 RDH13Q8NBN7 331 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 PIGOQ8TEQ8 1089 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 EIF3CQ99613 913 aaKnown RBP13.12□□□□□ -0.31
PCNX4-204ENST00000406949 BHMT2Q9H2M3 363 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 ADAMTS1Q9UHI8 967 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 DDTLA6NHG4 134 aaPredicted RBP13.12□□□□□ -0.31
PCNX4-204ENST00000406949 ZBTB22O15209 634 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 PDIA5Q14554 519 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 AOC3Q16853 763 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 KIAA0753Q2KHM9 967 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 MYCT1Q8N699 235 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 NAP1L4Q99733 375 aaKnown RBP13.12□□□□□ -0.31
PCNX4-204ENST00000406949 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.12□□□□□ -0.31
PCNX4-204ENST00000406949 CWC15Q9P013 229 aaKnown RBP13.12□□□□□ -0.31
PCNX4-204ENST00000406949 ARMCX3Q9UH62 379 aaPredicted RBP13.12□□□□□ -0.31
PCNX4-204ENST00000406949 GAKO14976 1311 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 CHRNA5P30532 468 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 USP8P40818 1118 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 CENPPQ6IPU0 288 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 FAM163AQ96GL9 167 aaPredicted RBP13.12□□□□□ -0.31
PCNX4-204ENST00000406949 GLT8D2Q9H1C3 349 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 EHD2Q9NZN4 543 aa13.12□□□□□ -0.31
PCNX4-204ENST00000406949 DOCK2Q92608 1830 aa13.11□□□□□ -0.31
PCNX4-204ENST00000406949 PLCH1Q4KWH8 1693 aa13.11□□□□□ -0.31
PCNX4-204ENST00000406949 ECE2O60344 883 aa13.11□□□□□ -0.31
PCNX4-204ENST00000406949 PPP1R11O60927 126 aaPredicted RBP13.11□□□□□ -0.31
PCNX4-204ENST00000406949 PRPF4BQ13523 1007 aaKnown RBP13.11□□□□□ -0.31
PCNX4-204ENST00000406949 C8orf74Q6P047 294 aa13.11□□□□□ -0.31
PCNX4-204ENST00000406949 MTMR9Q96QG7 549 aa13.11□□□□□ -0.31
PCNX4-204ENST00000406949 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.11□□□□□ -0.31
PCNX4-204ENST00000406949 ADAM21Q9UKJ8 722 aa13.11□□□□□ -0.31
PCNX4-204ENST00000406949 SNED1Q8TER0 1413 aa13.11□□□□□ -0.31
PCNX4-204ENST00000406949 MYH8P13535 1937 aa13.11□□□□□ -0.31
PCNX4-204ENST00000406949 SFR1Q86XK3 245 aa13.11□□□□□ -0.31
PCNX4-204ENST00000406949 SLFN12Q8IYM2 578 aa13.11□□□□□ -0.31
PCNX4-204ENST00000406949 OGFOD1Q8N543 542 aa13.11□□□□□ -0.31
PCNX4-204ENST00000406949 CAPN6Q9Y6Q1 641 aa13.11□□□□□ -0.31
PCNX4-204ENST00000406949 TUBBP07437 444 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 BMP3P12645 472 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 HSPA1LP34931 641 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 EHHADHQ08426 723 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 CTTNQ14247 550 aaKnown RBP13.1□□□□□ -0.31
PCNX4-204ENST00000406949 ECM1Q16610 540 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 TBC1D10BQ4KMP7 808 aaPredicted RBP13.1□□□□□ -0.31
PCNX4-204ENST00000406949 MIIPQ5JXC2 388 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 FAM83BQ5T0W9 1011 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 SYDE2Q5VT97 1194 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 VPS36Q86VN1 386 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 CERKQ8TCT0 537 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 MASTLQ96GX5 879 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 ERGIC2Q96RQ1 377 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 ARHGAP20Q9P2F6 1191 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 HYOU1Q9Y4L1 999 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 RAD17O75943 681 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 XRCC5P13010 732 aaKnown RBP13.1□□□□□ -0.31
PCNX4-204ENST00000406949 SMARCA1P28370 1054 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 PSMD2Q13200 908 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 SLC27A3Q5K4L6 730 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 HOMER2Q9NSB8 354 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 RGL1Q9NZL6 768 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 PACSIN2Q9UNF0 486 aaPredicted RBP13.1□□□□□ -0.31
PCNX4-204ENST00000406949 JRKLQ9Y4A0 524 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 ECM29Q5VYK3 1845 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 H3BQF6 201 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 PSMD14O00487 310 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 EPB41P11171 864 aaKnown RBP13.1□□□□□ -0.31
PCNX4-204ENST00000406949 CYP2J2P51589 502 aa13.1□□□□□ -0.31
PCNX4-204ENST00000406949 BEND6Q5SZJ8 279 aaPredicted RBP13.1□□□□□ -0.31
PCNX4-204ENST00000406949 AHDC1Q5TGY3 1603 aaPredicted RBP13.1□□□□□ -0.31
PCNX4-204ENST00000406949 APOBEC3HQ6NTF7 200 aaKnown RBP13.1□□□□□ -0.31
PCNX4-204ENST00000406949 C15orf52Q6ZUT6 534 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms