RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 NEDD9Q14511 834 aa11.84□□□□□ -0.51
FAM49A-202ENST00000406434 MFSD10Q14728 455 aa11.84□□□□□ -0.51
FAM49A-202ENST00000406434 HSDL1Q3SXM5 330 aa11.84□□□□□ -0.51
FAM49A-202ENST00000406434 JAKMIP3Q5VZ66 844 aa11.84□□□□□ -0.51
FAM49A-202ENST00000406434 CYFIP1Q7L576 1253 aa11.84□□□□□ -0.51
FAM49A-202ENST00000406434 ZNF713Q8N859 430 aaPredicted RBP11.84□□□□□ -0.51
FAM49A-202ENST00000406434 PDCD7Q8N8D1 485 aaKnown RBP11.84□□□□□ -0.51
FAM49A-202ENST00000406434 PPTC7Q8NI37 304 aa11.84□□□□□ -0.51
FAM49A-202ENST00000406434 EMID1Q96A84 441 aaPredicted RBP11.84□□□□□ -0.51
FAM49A-202ENST00000406434 ZNF274Q96GC6 653 aaPredicted RBP11.84□□□□□ -0.51
FAM49A-202ENST00000406434 LRCH3Q96II8 777 aa11.84□□□□□ -0.51
FAM49A-202ENST00000406434 INPP4AQ96PE3 977 aaPredicted RBP11.84□□□□□ -0.51
FAM49A-202ENST00000406434 HIPK3Q9H422 1215 aa11.84□□□□□ -0.51
FAM49A-202ENST00000406434 PKD2L1Q9P0L9 805 aa11.84□□□□□ -0.51
FAM49A-202ENST00000406434 NOD1Q9Y239 953 aa11.84□□□□□ -0.51
FAM49A-202ENST00000406434 FRMPD4Q14CM0 1322 aa11.84□□□□□ -0.51
FAM49A-202ENST00000406434 NOP56O00567 594 aaKnown RBP11.83□□□□□ -0.52
FAM49A-202ENST00000406434 SOX1O00570 391 aaPredicted RBP11.83□□□□□ -0.52
FAM49A-202ENST00000406434 PPFIA4O75335 1185 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 FOSP01100 380 aaPredicted RBP11.83□□□□□ -0.52
FAM49A-202ENST00000406434 ZNF286BP0CG31 522 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 IFNAR1P17181 557 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 ICAM3P32942 547 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 ZNF76P36508 570 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 PSEN2P49810 448 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 EPHB4P54760 987 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 CCL23P55773 120 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 SEMA3FQ13275 785 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 NTRK3Q16288 839 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 PKN1Q16512 942 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 C9orf50Q5SZB4 431 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 MFSD5Q6N075 450 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 PPP1R18Q6NYC8 613 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 NFRKBQ6P4R8 1299 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 TMEM199Q8N511 208 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 KAT2BQ92831 832 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 GLT8D2Q9H1C3 349 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 C6orf50Q9HD87 102 aa11.83□□□□□ -0.52
FAM49A-202ENST00000406434 ATP9AO75110 1047 aa11.82□□□□□ -0.52
FAM49A-202ENST00000406434 GABBR2O75899 941 aa11.82□□□□□ -0.52
FAM49A-202ENST00000406434 ACRP10323 421 aa11.82□□□□□ -0.52
FAM49A-202ENST00000406434 CSF2RAP15509 400 aa11.82□□□□□ -0.52
FAM49A-202ENST00000406434 ITGB5P18084 799 aa11.82□□□□□ -0.52
FAM49A-202ENST00000406434 ANAPC15P60006 121 aa11.82□□□□□ -0.52
FAM49A-202ENST00000406434 PPIGQ13427 754 aaKnown RBP eCLIP11.82□□□□□ -0.52
FAM49A-202ENST00000406434 LTBP2Q14767 1821 aa11.82□□□□□ -0.52
FAM49A-202ENST00000406434 UMODL1Q5DID0 1318 aa11.82□□□□□ -0.52
FAM49A-202ENST00000406434 UTP14CQ5TAP6 766 aaKnown RBP11.82□□□□□ -0.52
FAM49A-202ENST00000406434 CPLX2Q6PUV4 134 aaKnown RBP11.82□□□□□ -0.52
FAM49A-202ENST00000406434 TRIM22Q8IYM9 498 aa11.82□□□□□ -0.52
FAM49A-202ENST00000406434 C7orf31Q8N865 590 aa11.82□□□□□ -0.52
FAM49A-202ENST00000406434 CCDC12Q8WUD4 166 aaPredicted RBP11.82□□□□□ -0.52
FAM49A-202ENST00000406434 RNF26Q9BY78 433 aaPredicted RBP11.82□□□□□ -0.52
FAM49A-202ENST00000406434 ANO3Q9BYT9 981 aa11.82□□□□□ -0.52
FAM49A-202ENST00000406434 SLKQ9H2G2 1235 aaPredicted RBP11.82□□□□□ -0.52
FAM49A-202ENST00000406434 DOCK5Q9H7D0 1870 aa11.82□□□□□ -0.52
FAM49A-202ENST00000406434 VPS54Q9P1Q0 977 aa11.82□□□□□ -0.52
FAM49A-202ENST00000406434 HDAC6Q9UBN7 1215 aa11.82□□□□□ -0.52
FAM49A-202ENST00000406434 UBIAD1Q9Y5Z9 338 aa11.82□□□□□ -0.52
FAM49A-202ENST00000406434 SCN10AQ9Y5Y9 1956 aa11.82□□□□□ -0.52
FAM49A-202ENST00000406434 DTNBO60941 627 aa11.81□□□□□ -0.52
FAM49A-202ENST00000406434 GNA11P29992 359 aa11.81□□□□□ -0.52
FAM49A-202ENST00000406434 NLRP5P59047 1200 aa11.81□□□□□ -0.52
FAM49A-202ENST00000406434 PTPN11Q06124 597 aaPredicted RBP11.81□□□□□ -0.52
FAM49A-202ENST00000406434 MTMR1Q13613 665 aa11.81□□□□□ -0.52
FAM49A-202ENST00000406434 PTGISQ16647 500 aa11.81□□□□□ -0.52
FAM49A-202ENST00000406434 KIAA0753Q2KHM9 967 aa11.81□□□□□ -0.52
FAM49A-202ENST00000406434 LRIT3Q3SXY7 679 aa11.81□□□□□ -0.52
FAM49A-202ENST00000406434 GDF6Q6KF10 455 aaPredicted RBP11.81□□□□□ -0.52
FAM49A-202ENST00000406434 POTEHQ6S545 545 aa11.81□□□□□ -0.52
FAM49A-202ENST00000406434 METTL7BQ6UX53 244 aa11.81□□□□□ -0.52
FAM49A-202ENST00000406434 RETREG2Q8NC44 543 aa11.81□□□□□ -0.52
FAM49A-202ENST00000406434 CYP2W1Q8TAV3 490 aa11.81□□□□□ -0.52
FAM49A-202ENST00000406434 GPRASP2Q96D09 838 aa11.81□□□□□ -0.52
FAM49A-202ENST00000406434 CDHR1Q96JP9 859 aa11.81□□□□□ -0.52
FAM49A-202ENST00000406434 NOC4LQ9BVI4 516 aaKnown RBP11.81□□□□□ -0.52
FAM49A-202ENST00000406434 KATNAL1Q9BW62 490 aa11.81□□□□□ -0.52
FAM49A-202ENST00000406434 JADE2Q9NQC1 790 aa11.81□□□□□ -0.52
FAM49A-202ENST00000406434 TPCN1Q9ULQ1 816 aa11.81□□□□□ -0.52
FAM49A-202ENST00000406434 TELO2Q9Y4R8 837 aa11.81□□□□□ -0.52
FAM49A-202ENST00000406434 RANBP2P49792 3224 aaKnown RBP11.81□□□□□ -0.52
FAM49A-202ENST00000406434 NID2Q14112 1375 aa11.81□□□□□ -0.52
FAM49A-202ENST00000406434 ADAMTS3O15072 1205 aa11.8□□□□□ -0.52
FAM49A-202ENST00000406434 CLK2P49760 499 aaKnown RBP11.8□□□□□ -0.52
FAM49A-202ENST00000406434 NEK4P51957 841 aa11.8□□□□□ -0.52
FAM49A-202ENST00000406434 AK2P54819 239 aa11.8□□□□□ -0.52
FAM49A-202ENST00000406434 SCRN1Q12765 414 aa11.8□□□□□ -0.52
FAM49A-202ENST00000406434 AP3B2Q13367 1082 aa11.8□□□□□ -0.52
FAM49A-202ENST00000406434 ANKRD1Q15327 319 aa11.8□□□□□ -0.52
FAM49A-202ENST00000406434 E2F4Q16254 413 aa11.8□□□□□ -0.52
FAM49A-202ENST00000406434 GIMAP8Q8ND71 665 aaPredicted RBP11.8□□□□□ -0.52
FAM49A-202ENST00000406434 SCLYQ96I15 445 aa11.8□□□□□ -0.52
FAM49A-202ENST00000406434 RNPC3Q96LT9 517 aaKnown RBP11.8□□□□□ -0.52
FAM49A-202ENST00000406434 UIMC1Q96RL1 719 aa11.8□□□□□ -0.52
FAM49A-202ENST00000406434 GPR20Q99678 358 aa11.8□□□□□ -0.52
FAM49A-202ENST00000406434 SENP7Q9BQF6 1050 aa11.8□□□□□ -0.52
FAM49A-202ENST00000406434 MXRA8Q9BRK3 442 aa11.8□□□□□ -0.52
FAM49A-202ENST00000406434 ZMYND12Q9H0C1 365 aa11.8□□□□□ -0.52
FAM49A-202ENST00000406434 TRIP12Q14669 1992 aaPredicted RBP11.8□□□□□ -0.52
FAM49A-202ENST00000406434 ESYT2A0FGR8 921 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms