RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 KLF18A0A0U1RQI7 1052 aa17.66■□□□□ 0.42
TPM1-207ENST00000403994 ZBTB43O43298 467 aa17.66■□□□□ 0.42
TPM1-207ENST00000403994 CKBP12277 381 aa17.66■□□□□ 0.42
TPM1-207ENST00000403994 HOXC8P31273 242 aa17.66■□□□□ 0.42
TPM1-207ENST00000403994 ZNF200P98182 395 aaPredicted RBP17.66■□□□□ 0.42
TPM1-207ENST00000403994 FUT2Q10981 343 aa17.66■□□□□ 0.42
TPM1-207ENST00000403994 PTK7Q13308 1070 aa17.66■□□□□ 0.42
TPM1-207ENST00000403994 GPNMBQ14956 572 aa17.66■□□□□ 0.42
TPM1-207ENST00000403994 TRIM50Q86XT4 487 aa17.66■□□□□ 0.42
TPM1-207ENST00000403994 SLC9A7Q96T83 725 aa17.66■□□□□ 0.42
TPM1-207ENST00000403994 GPR20Q99678 358 aa17.66■□□□□ 0.42
TPM1-207ENST00000403994 FTOQ9C0B1 505 aaKnown RBP eCLIP17.66■□□□□ 0.42
TPM1-207ENST00000403994 PRDM12Q9H4Q4 367 aa17.66■□□□□ 0.42
TPM1-207ENST00000403994 PCDHA11Q9Y5I1 949 aa17.66■□□□□ 0.42
TPM1-207ENST00000403994 SIP14410 1827 aa17.65■□□□□ 0.42
TPM1-207ENST00000403994 MUC3AQ02505 3323 aa17.65■□□□□ 0.42
TPM1-207ENST00000403994 GOLGA8AA7E2F4 631 aa17.65■□□□□ 0.42
TPM1-207ENST00000403994 GOLGA8BA8MQT2 603 aa17.65■□□□□ 0.42
TPM1-207ENST00000403994 H3BRB1 525 aa17.65■□□□□ 0.42
TPM1-207ENST00000403994 BAIAP3O94812 1187 aa17.65■□□□□ 0.42
TPM1-207ENST00000403994 HMGB1P09429 215 aaKnown RBP17.65■□□□□ 0.42
TPM1-207ENST00000403994 MYOGP15173 224 aa17.65■□□□□ 0.42
TPM1-207ENST00000403994 PPP2R2DQ66LE6 453 aa17.65■□□□□ 0.42
TPM1-207ENST00000403994 TYW1BQ6NUM6 668 aa17.65■□□□□ 0.42
TPM1-207ENST00000403994 PPP1R18Q6NYC8 613 aa17.65■□□□□ 0.42
TPM1-207ENST00000403994 TRAF7Q6Q0C0 670 aa17.65■□□□□ 0.42
TPM1-207ENST00000403994 SERINC5Q86VE9 423 aa17.65■□□□□ 0.42
TPM1-207ENST00000403994 KCNB2Q92953 911 aa17.65■□□□□ 0.42
TPM1-207ENST00000403994 GPRASP2Q96D09 838 aa17.65■□□□□ 0.42
TPM1-207ENST00000403994 SENP7Q9BQF6 1050 aa17.65■□□□□ 0.42
TPM1-207ENST00000403994 TUT1Q9H6E5 874 aaKnown RBP17.65■□□□□ 0.42
TPM1-207ENST00000403994 SLC28A3Q9HAS3 691 aa17.65■□□□□ 0.42
TPM1-207ENST00000403994 TELO2Q9Y4R8 837 aa17.65■□□□□ 0.42
TPM1-207ENST00000403994 NID2Q14112 1375 aa17.65■□□□□ 0.42
TPM1-207ENST00000403994 SPDYE3A6NKU9 549 aa17.64■□□□□ 0.41
TPM1-207ENST00000403994 NBNO60934 754 aa17.64■□□□□ 0.41
TPM1-207ENST00000403994 CXCL10P02778 98 aa17.64■□□□□ 0.41
TPM1-207ENST00000403994 SMIM10L2AP0DMW4 78 aa17.64■□□□□ 0.41
TPM1-207ENST00000403994 SMIM10L2BP0DMW5 78 aa17.64■□□□□ 0.41
TPM1-207ENST00000403994 CPA1P15085 419 aa17.64■□□□□ 0.41
TPM1-207ENST00000403994 ITGB5P18084 799 aa17.64■□□□□ 0.41
TPM1-207ENST00000403994 RCAN1P53805 252 aa17.64■□□□□ 0.41
TPM1-207ENST00000403994 SP4Q02446 784 aa17.64■□□□□ 0.41
TPM1-207ENST00000403994 NLRX1Q86UT6 975 aa17.64■□□□□ 0.41
TPM1-207ENST00000403994 USP38Q8NB14 1042 aa17.64■□□□□ 0.41
TPM1-207ENST00000403994 GAS2L1Q99501 681 aaPredicted RBP17.64■□□□□ 0.41
TPM1-207ENST00000403994 USP26Q9BXU7 913 aa17.64■□□□□ 0.41
TPM1-207ENST00000403994 C17orf102A2RUQ5 167 aa17.63■□□□□ 0.41
TPM1-207ENST00000403994 RBAK-RBAKDNI3L0D1 243 aa17.63■□□□□ 0.41
TPM1-207ENST00000403994 STXBP3O00186 592 aa17.63■□□□□ 0.41
TPM1-207ENST00000403994 DLL1O00548 723 aa17.63■□□□□ 0.41
TPM1-207ENST00000403994 PARNO95453 639 aaKnown RBP17.63■□□□□ 0.41
TPM1-207ENST00000403994 CA3P07451 260 aa17.63■□□□□ 0.41
TPM1-207ENST00000403994 KCNA2P16389 499 aa17.63■□□□□ 0.41
TPM1-207ENST00000403994 HSPA4P34932 840 aa17.63■□□□□ 0.41
TPM1-207ENST00000403994 NAPAP54920 295 aa17.63■□□□□ 0.41
TPM1-207ENST00000403994 MBTPS1Q14703 1052 aa17.63■□□□□ 0.41
TPM1-207ENST00000403994 ZNF618Q5T7W0 954 aa17.63■□□□□ 0.41
TPM1-207ENST00000403994 CDHR1Q96JP9 859 aa17.63■□□□□ 0.41
TPM1-207ENST00000403994 JAKMIP1Q96N16 626 aaKnown RBP17.63■□□□□ 0.41
TPM1-207ENST00000403994 FAM217BQ9NTX9 383 aaPredicted RBP17.63■□□□□ 0.41
TPM1-207ENST00000403994 SNX14Q9Y5W7 946 aa17.63■□□□□ 0.41
TPM1-207ENST00000403994 KAT6AQ92794 2004 aa17.62■□□□□ 0.41
TPM1-207ENST00000403994 hCG_1984214I3L0E3 225 aa17.62■□□□□ 0.41
TPM1-207ENST00000403994 CDC27P30260 824 aa17.62■□□□□ 0.41
TPM1-207ENST00000403994 WDR5P61964 334 aaKnown RBP17.62■□□□□ 0.41
TPM1-207ENST00000403994 MTMR1Q13613 665 aa17.62■□□□□ 0.41
TPM1-207ENST00000403994 ADGRE1Q14246 886 aa17.62■□□□□ 0.41
TPM1-207ENST00000403994 TCTN1Q2MV58 587 aa17.62■□□□□ 0.41
TPM1-207ENST00000403994 CNKSR3Q6P9H4 555 aa17.62■□□□□ 0.41
TPM1-207ENST00000403994 HERC6Q8IVU3 1022 aa17.62■□□□□ 0.41
TPM1-207ENST00000403994 ZNF713Q8N859 430 aaPredicted RBP17.62■□□□□ 0.41
TPM1-207ENST00000403994 GIMAP8Q8ND71 665 aaPredicted RBP17.62■□□□□ 0.41
TPM1-207ENST00000403994 PHOSPHO2Q8TCD6 241 aa17.62■□□□□ 0.41
TPM1-207ENST00000403994 ATP6V0A1Q93050 837 aa17.62■□□□□ 0.41
TPM1-207ENST00000403994 RIC8AQ9NPQ8 531 aa17.62■□□□□ 0.41
TPM1-207ENST00000403994 ZNF215Q9UL58 517 aaPredicted RBP17.62■□□□□ 0.41
TPM1-207ENST00000403994 PCDHA6Q9UN73 950 aa17.62■□□□□ 0.41
TPM1-207ENST00000403994 PCDHA8Q9Y5H6 950 aa17.62■□□□□ 0.41
TPM1-207ENST00000403994 UBIAD1Q9Y5Z9 338 aa17.62■□□□□ 0.41
TPM1-207ENST00000403994 ATP9AO75110 1047 aa17.61■□□□□ 0.41
TPM1-207ENST00000403994 KCNJ6P48051 423 aa17.61■□□□□ 0.41
TPM1-207ENST00000403994 METAP2P50579 478 aaKnown RBP eCLIP17.61■□□□□ 0.41
TPM1-207ENST00000403994 ADCY7P51828 1080 aa17.61■□□□□ 0.41
TPM1-207ENST00000403994 FGD1P98174 961 aa17.61■□□□□ 0.41
TPM1-207ENST00000403994 APOBRQ0VD83 1088 aa17.61■□□□□ 0.41
TPM1-207ENST00000403994 TEX2Q8IWB9 1127 aa17.61■□□□□ 0.41
TPM1-207ENST00000403994 EHMT1Q9H9B1 1298 aa17.61■□□□□ 0.41
TPM1-207ENST00000403994 BARHL2Q9NY43 387 aa17.61■□□□□ 0.41
TPM1-207ENST00000403994 PKD2L1Q9P0L9 805 aa17.61■□□□□ 0.41
TPM1-207ENST00000403994 NAP1L2Q9ULW6 460 aaPredicted RBP17.61■□□□□ 0.41
TPM1-207ENST00000403994 TREHO43280 583 aa17.6■□□□□ 0.41
TPM1-207ENST00000403994 ARHGEF15O94989 841 aa17.6■□□□□ 0.41
TPM1-207ENST00000403994 REC8O95072 547 aa17.6■□□□□ 0.41
TPM1-207ENST00000403994 TCF7P36402 384 aaPredicted RBP17.6■□□□□ 0.41
TPM1-207ENST00000403994 THPOP40225 353 aa17.6■□□□□ 0.41
TPM1-207ENST00000403994 DEFB103AP81534 67 aa17.6■□□□□ 0.41
TPM1-207ENST00000403994 UTP14CQ5TAP6 766 aaKnown RBP17.6■□□□□ 0.41
TPM1-207ENST00000403994 BLOC1S2Q6QNY1 142 aa17.6■□□□□ 0.41
TPM1-207ENST00000403994 Q6ZUG5 572 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 289 ms