RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 GCOM1H8Y6P7 765 aaPredicted RBP16.9■□□□□ 0.3
VAMP1-203ENST00000400911 CTSHP09668 335 aa16.9■□□□□ 0.3
VAMP1-203ENST00000400911 POLR2MP0CAP2 368 aa16.9■□□□□ 0.3
VAMP1-203ENST00000400911 ALADP13716 330 aa16.9■□□□□ 0.3
VAMP1-203ENST00000400911 HOXC8P31273 242 aa16.9■□□□□ 0.3
VAMP1-203ENST00000400911 PUS10Q3MIT2 529 aaKnown RBP16.9■□□□□ 0.3
VAMP1-203ENST00000400911 TCEAL5Q5H9L2 206 aa16.9■□□□□ 0.3
VAMP1-203ENST00000400911 EP400NLQ6ZTU2 488 aa16.9■□□□□ 0.3
VAMP1-203ENST00000400911 FCHSD1Q86WN1 690 aa16.9■□□□□ 0.3
VAMP1-203ENST00000400911 TMEM192Q8IY95 271 aa16.9■□□□□ 0.3
VAMP1-203ENST00000400911 SAMD11Q96NU1 681 aa16.9■□□□□ 0.3
VAMP1-203ENST00000400911 COL4A4P53420 1690 aaPredicted RBP16.9■□□□□ 0.3
VAMP1-203ENST00000400911 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.89■□□□□ 0.29
VAMP1-203ENST00000400911 PALM3A6NDB9 673 aaPredicted RBP16.89■□□□□ 0.29
VAMP1-203ENST00000400911 LGALS2P05162 132 aa16.89■□□□□ 0.29
VAMP1-203ENST00000400911 SLC35G1Q2M3R5 365 aa16.89■□□□□ 0.29
VAMP1-203ENST00000400911 TIGD5Q53EQ6 642 aa16.89■□□□□ 0.29
VAMP1-203ENST00000400911 HOMER1Q86YM7 354 aa16.89■□□□□ 0.29
VAMP1-203ENST00000400911 PLEKHM2Q8IWE5 1019 aa16.89■□□□□ 0.29
VAMP1-203ENST00000400911 SAMD3Q8N6K7 520 aa16.89■□□□□ 0.29
VAMP1-203ENST00000400911 PABPC5Q96DU9 382 aaKnown RBP16.89■□□□□ 0.29
VAMP1-203ENST00000400911 DSCC1Q9BVC3 393 aa16.89■□□□□ 0.29
VAMP1-203ENST00000400911 CNNM2Q9H8M5 875 aa16.89■□□□□ 0.29
VAMP1-203ENST00000400911 SETD4Q9NVD3 440 aa16.89■□□□□ 0.29
VAMP1-203ENST00000400911 NOP56O00567 594 aaKnown RBP16.88■□□□□ 0.29
VAMP1-203ENST00000400911 SEC23AQ15436 765 aa16.88■□□□□ 0.29
VAMP1-203ENST00000400911 ALYREFQ86V81 257 aaKnown RBP16.88■□□□□ 0.29
VAMP1-203ENST00000400911 PIGSQ96S52 555 aa16.88■□□□□ 0.29
VAMP1-203ENST00000400911 USP26Q9BXU7 913 aa16.88■□□□□ 0.29
VAMP1-203ENST00000400911 IFIH1Q9BYX4 1025 aaKnown RBP16.88■□□□□ 0.29
VAMP1-203ENST00000400911 PTPRSQ13332 1948 aa16.88■□□□□ 0.29
VAMP1-203ENST00000400911 CAND2O75155 1236 aa16.87■□□□□ 0.29
VAMP1-203ENST00000400911 GNAT1P11488 350 aa16.87■□□□□ 0.29
VAMP1-203ENST00000400911 MRPS9P82933 396 aaKnown RBP16.87■□□□□ 0.29
VAMP1-203ENST00000400911 CYB5R4Q7L1T6 521 aa16.87■□□□□ 0.29
VAMP1-203ENST00000400911 CYFIP1Q7L576 1253 aa16.87■□□□□ 0.29
VAMP1-203ENST00000400911 CHD1LQ86WJ1 897 aa16.87■□□□□ 0.29
VAMP1-203ENST00000400911 OSBPL3Q9H4L5 887 aa16.87■□□□□ 0.29
VAMP1-203ENST00000400911 NSUN3Q9H649 340 aaKnown RBP16.87■□□□□ 0.29
VAMP1-203ENST00000400911 TELO2Q9Y4R8 837 aa16.87■□□□□ 0.29
VAMP1-203ENST00000400911 WDFY4Q6ZS81 3184 aa16.87■□□□□ 0.29
VAMP1-203ENST00000400911 POTEB3A0JP26 581 aa16.86■□□□□ 0.29
VAMP1-203ENST00000400911 SPATA31C2B4DYI2 1134 aa16.86■□□□□ 0.29
VAMP1-203ENST00000400911 HIP1O00291 1037 aa16.86■□□□□ 0.29
VAMP1-203ENST00000400911 DCXO43602 365 aa16.86■□□□□ 0.29
VAMP1-203ENST00000400911 ZP2Q05996 745 aa16.86■□□□□ 0.29
VAMP1-203ENST00000400911 COL19A1Q14993 1142 aa16.86■□□□□ 0.29
VAMP1-203ENST00000400911 CSPP1Q1MSJ5 1256 aa16.86■□□□□ 0.29
VAMP1-203ENST00000400911 POTEBQ6S5H4 581 aa16.86■□□□□ 0.29
VAMP1-203ENST00000400911 METTL7BQ6UX53 244 aa16.86■□□□□ 0.29
VAMP1-203ENST00000400911 TRIM50Q86XT4 487 aa16.86■□□□□ 0.29
VAMP1-203ENST00000400911 SMC5Q8IY18 1101 aa16.86■□□□□ 0.29
VAMP1-203ENST00000400911 IL17RAQ96F46 866 aa16.86■□□□□ 0.29
VAMP1-203ENST00000400911 GPR20Q99678 358 aa16.86■□□□□ 0.29
VAMP1-203ENST00000400911 RIOX1Q9H6W3 641 aa16.86■□□□□ 0.29
VAMP1-203ENST00000400911 CLDND1Q9NY35 253 aa16.86■□□□□ 0.29
VAMP1-203ENST00000400911 RTEL1Q9NZ71 1219 aa16.86■□□□□ 0.29
VAMP1-203ENST00000400911 TRIP12Q14669 1992 aaPredicted RBP16.86■□□□□ 0.29
VAMP1-203ENST00000400911 ICAM3P32942 547 aa16.85■□□□□ 0.29
VAMP1-203ENST00000400911 NEDD9Q14511 834 aa16.85■□□□□ 0.29
VAMP1-203ENST00000400911 GNPTABQ3T906 1256 aa16.85■□□□□ 0.29
VAMP1-203ENST00000400911 UTP14CQ5TAP6 766 aaKnown RBP16.85■□□□□ 0.29
VAMP1-203ENST00000400911 APBB2Q92870 758 aa16.85■□□□□ 0.29
VAMP1-203ENST00000400911 FAM50BQ9Y247 325 aa16.85■□□□□ 0.29
VAMP1-203ENST00000400911 PNMA6FA0A0J9YX94 578 aa16.84■□□□□ 0.29
VAMP1-203ENST00000400911 CYTH3O43739 400 aa16.84■□□□□ 0.29
VAMP1-203ENST00000400911 CHRNA1P02708 482 aa16.84■□□□□ 0.29
VAMP1-203ENST00000400911 LTBRP36941 435 aa16.84■□□□□ 0.29
VAMP1-203ENST00000400911 ADAM17P78536 824 aa16.84■□□□□ 0.29
VAMP1-203ENST00000400911 ARHGAP4P98171 946 aa16.84■□□□□ 0.29
VAMP1-203ENST00000400911 SP4Q02446 784 aa16.84■□□□□ 0.29
VAMP1-203ENST00000400911 NUCB1Q02818 461 aa16.84■□□□□ 0.29
VAMP1-203ENST00000400911 TRAF1Q13077 416 aa16.84■□□□□ 0.29
VAMP1-203ENST00000400911 SEMA3FQ13275 785 aa16.84■□□□□ 0.29
VAMP1-203ENST00000400911 GRM4Q14833 912 aa16.84■□□□□ 0.29
VAMP1-203ENST00000400911 FAM26DQ5JW98 314 aa16.84■□□□□ 0.29
VAMP1-203ENST00000400911 FIBCD1Q8N539 461 aa16.84■□□□□ 0.29
VAMP1-203ENST00000400911 LMBR1Q8WVP7 490 aa16.84■□□□□ 0.29
VAMP1-203ENST00000400911 INPP4AQ96PE3 977 aaPredicted RBP16.84■□□□□ 0.29
VAMP1-203ENST00000400911 IL25Q9H293 177 aa16.84■□□□□ 0.29
VAMP1-203ENST00000400911 RWDD1Q9H446 243 aaPredicted RBP16.84■□□□□ 0.29
VAMP1-203ENST00000400911 SENP2Q9HC62 589 aa16.84■□□□□ 0.29
VAMP1-203ENST00000400911 PRKAG3Q9UGI9 489 aa16.84■□□□□ 0.29
VAMP1-203ENST00000400911 SUPT16HQ9Y5B9 1047 aaKnown RBP16.84■□□□□ 0.29
VAMP1-203ENST00000400911 C19orf67A6NJJ6 358 aa16.83■□□□□ 0.28
VAMP1-203ENST00000400911 STAM2O75886 525 aa16.83■□□□□ 0.28
VAMP1-203ENST00000400911 IGHDP01880 384 aa16.83■□□□□ 0.28
VAMP1-203ENST00000400911 CTNNB1P35222 781 aa16.83■□□□□ 0.28
VAMP1-203ENST00000400911 BMPR1AP36894 532 aa16.83■□□□□ 0.28
VAMP1-203ENST00000400911 RPAINQ86UA6 219 aa16.83■□□□□ 0.28
VAMP1-203ENST00000400911 ADHFE1Q8IWW8 467 aa16.83■□□□□ 0.28
VAMP1-203ENST00000400911 PIBF1Q8WXW3 757 aa16.83■□□□□ 0.28
VAMP1-203ENST00000400911 ZNF215Q9UL58 517 aaPredicted RBP16.83■□□□□ 0.28
VAMP1-203ENST00000400911 C5orf67F2Z3F1 127 aa16.82■□□□□ 0.28
VAMP1-203ENST00000400911 IFIT3O14879 490 aaKnown RBP16.82■□□□□ 0.28
VAMP1-203ENST00000400911 GRM6O15303 877 aa16.82■□□□□ 0.28
VAMP1-203ENST00000400911 FIBPO43427 364 aa16.82■□□□□ 0.28
VAMP1-203ENST00000400911 NCK2O43639 380 aa16.82■□□□□ 0.28
VAMP1-203ENST00000400911 RB1P06400 928 aa16.82■□□□□ 0.28
VAMP1-203ENST00000400911 LINC00271P0C7V0 271 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms