RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 PPP4R3AQ6IN85 833 aa16.07■□□□□ 0.16
CCDC144A-205ENST00000399264 TRIM58Q8NG06 486 aa16.07■□□□□ 0.16
CCDC144A-205ENST00000399264 SCFD1Q8WVM8 642 aa16.07■□□□□ 0.16
CCDC144A-205ENST00000399264 LSM14BQ9BX40 385 aaKnown RBP16.07■□□□□ 0.16
CCDC144A-205ENST00000399264 RAB34Q9BZG1 259 aa16.07■□□□□ 0.16
CCDC144A-205ENST00000399264 IKZF4Q9H2S9 585 aa16.07■□□□□ 0.16
CCDC144A-205ENST00000399264 TRIM66O15016 1216 aa16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 ZBTB5O15062 677 aa16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 PRPF6O94906 941 aaKnown RBP16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 PLA2G4BP0C869 781 aa16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 ACTN1P12814 892 aa16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 CKAP4Q07065 602 aaKnown RBP16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 QRICH1Q2TAL8 776 aa16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 APOBEC3HQ6NTF7 200 aaKnown RBP16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 CCDC84Q86UT8 332 aaPredicted RBP16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 GPBP1Q86WP2 473 aa16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 SLF2Q8IX21 1173 aa16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 FAM71BQ8TC56 605 aa16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 PCDHA2Q9Y5H9 948 aa16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 COL4A3BPQ9Y5P4 624 aa16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 FTCDO95954 541 aa16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 GOLPH3Q9H4A6 298 aa16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 RABEP2Q9H5N1 569 aa16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 RBM12Q9NTZ6 932 aaKnown RBP16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 PCDHA1Q9Y5I3 950 aa16.06■□□□□ 0.16
CCDC144A-205ENST00000399264 POLRMTO00411 1230 aaKnown RBP16.05■□□□□ 0.16
CCDC144A-205ENST00000399264 FKBP3Q00688 224 aaKnown RBP16.05■□□□□ 0.16
CCDC144A-205ENST00000399264 KLHDC7AQ5VTJ3 777 aa16.05■□□□□ 0.16
CCDC144A-205ENST00000399264 TBC1D5Q92609 795 aa16.05■□□□□ 0.16
CCDC144A-205ENST00000399264 PSD3Q9NYI0 1048 aa16.05■□□□□ 0.16
CCDC144A-205ENST00000399264 ESYT3A0FGR9 886 aa16.05■□□□□ 0.16
CCDC144A-205ENST00000399264 PPEF1O14829 653 aaPredicted RBP16.05■□□□□ 0.16
CCDC144A-205ENST00000399264 TOM1O60784 492 aa16.05■□□□□ 0.16
CCDC144A-205ENST00000399264 LCA5LO95447 670 aa16.05■□□□□ 0.16
CCDC144A-205ENST00000399264 PPP1R2P41236 205 aa16.05■□□□□ 0.16
CCDC144A-205ENST00000399264 MRPL12P52815 198 aaKnown RBP16.05■□□□□ 0.16
CCDC144A-205ENST00000399264 SND1Q7KZF4 910 aaKnown RBP eCLIP16.05■□□□□ 0.16
CCDC144A-205ENST00000399264 CYP2W1Q8TAV3 490 aa16.05■□□□□ 0.16
CCDC144A-205ENST00000399264 DBNDD1Q9H9R9 158 aa16.05■□□□□ 0.16
CCDC144A-205ENST00000399264 ATF5Q9Y2D1 282 aaPredicted RBP16.05■□□□□ 0.16
CCDC144A-205ENST00000399264 PLIN4Q96Q06 1357 aa16.05■□□□□ 0.16
CCDC144A-205ENST00000399264 A0A087X0T9 212 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 DDTLA6NHG4 134 aaPredicted RBP16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 UBAP1LF5GYI3 381 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 FAM228BP0C875 321 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 EEF2P13639 858 aaKnown RBP16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 CYP11B2P19099 503 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 POLD1P28340 1107 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 HOXA10P31260 410 aaPredicted RBP16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 TRADDQ15628 312 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 USH1GQ495M9 461 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 CERS3Q8IU89 383 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 FAM133AQ8N9E0 248 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 TSG101Q99816 390 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 ZC3H12CQ9C0D7 883 aaKnown RBP16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 EHD4Q9H223 541 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 ADAMTS1Q9UHI8 967 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 TARSL2A2RTX5 802 aaKnown RBP16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 KLRC1P26715 233 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 PABPC4Q13310 644 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 KIAA0825Q8IV33 1275 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 PROCA1Q8NCQ7 364 aaPredicted RBP16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 TSGA10Q9BZW7 698 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 ARFGEF1Q9Y6D6 1849 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 NHSQ6T4R5 1651 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 TULP2O00295 520 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 ORC2Q13416 577 aaPredicted RBP16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 RAPGEF1Q13905 1077 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 PRR16Q569H4 304 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 MUM1L1Q5H9M0 696 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 LRRC31Q6UY01 552 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 SIAH1Q8IUQ4 282 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 MSL3Q8N5Y2 521 aaKnown RBP16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 GOLGA5Q8TBA6 731 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 KCTD10Q9H3F6 313 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 EMILIN3Q9NT22 766 aa16.04■□□□□ 0.16
CCDC144A-205ENST00000399264 MYH4Q9Y623 1939 aa16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 AARSP49588 968 aaKnown RBP eCLIP16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 CYP4A11Q02928 519 aa16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 KCNA1Q09470 495 aa16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 ADAM9Q13443 819 aa16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 HAUS3Q68CZ6 603 aa16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 TSEN2Q8NCE0 465 aaKnown RBP16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 AENQ8WTP8 325 aaKnown RBP16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 RSPH10B2B2RC85 870 aa16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 hCG_1984214I3L0E3 225 aa16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 PALMO75781 387 aa16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 GDF11O95390 407 aa16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 TUBBP07437 444 aa16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 RSPH10BP0C881 870 aa16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 SLC9A1P19634 815 aa16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 HOXD13P35453 343 aa16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 JAG1P78504 1218 aa16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 TTC19Q6DKK2 380 aaPredicted RBP16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 CATSPER3Q86XQ3 398 aa16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 TRIM59Q8IWR1 403 aa16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 ZNF713Q8N859 430 aaPredicted RBP16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 ANO3Q9BYT9 981 aa16.03■□□□□ 0.16
CCDC144A-205ENST00000399264 ZNF219Q9P2Y4 722 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms