RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 CXCR5P32302 372 aa28.26■■■□□ 2.11
COL13A1-203ENST00000398969 SLC1A4P43007 532 aa28.26■■■□□ 2.11
COL13A1-203ENST00000398969 PICALMQ13492 652 aa28.26■■■□□ 2.11
COL13A1-203ENST00000398969 SEPT2Q15019 361 aa28.26■■■□□ 2.11
COL13A1-203ENST00000398969 ADGRF4Q8IZF3 695 aa28.26■■■□□ 2.11
COL13A1-203ENST00000398969 MTMR8Q96EF0 704 aa28.26■■■□□ 2.11
COL13A1-203ENST00000398969 ZC3H12CQ9C0D7 883 aaKnown RBP28.26■■■□□ 2.11
COL13A1-203ENST00000398969 NCK2O43639 380 aa28.26■■■□□ 2.11
COL13A1-203ENST00000398969 GTF2IP78347 998 aa28.26■■■□□ 2.11
COL13A1-203ENST00000398969 RASSF7Q02833 373 aa28.26■■■□□ 2.11
COL13A1-203ENST00000398969 ZNF543Q08ER8 600 aa28.26■■■□□ 2.11
COL13A1-203ENST00000398969 SLC15A2Q16348 729 aa28.26■■■□□ 2.11
COL13A1-203ENST00000398969 GJA10Q969M2 543 aa28.26■■■□□ 2.11
COL13A1-203ENST00000398969 TMEM51Q9NW97 253 aa28.26■■■□□ 2.11
COL13A1-203ENST00000398969 SMARCAL1Q9NZC9 954 aa28.26■■■□□ 2.11
COL13A1-203ENST00000398969 RRP15Q9Y3B9 282 aaKnown RBP28.26■■■□□ 2.11
COL13A1-203ENST00000398969 MYH10P35580 1976 aa28.26■■■□□ 2.11
COL13A1-203ENST00000398969 RBAK-RBAKDNI3L0D1 243 aa28.25■■■□□ 2.11
COL13A1-203ENST00000398969 EN1Q05925 392 aaPredicted RBP28.25■■■□□ 2.11
COL13A1-203ENST00000398969 CAMKK2Q96RR4 588 aa28.25■■■□□ 2.11
COL13A1-203ENST00000398969 TLR10Q9BXR5 811 aa28.25■■■□□ 2.11
COL13A1-203ENST00000398969 PANK4Q9NVE7 773 aa28.25■■■□□ 2.11
COL13A1-203ENST00000398969 CEP72Q9P209 647 aa28.25■■■□□ 2.11
COL13A1-203ENST00000398969 GOLGA6BA6NDN3 693 aa28.25■■■□□ 2.11
COL13A1-203ENST00000398969 TRAF5O00463 557 aa28.25■■■□□ 2.11
COL13A1-203ENST00000398969 MATR3P43243 847 aaKnown RBP eCLIP28.25■■■□□ 2.11
COL13A1-203ENST00000398969 CCDC40Q4G0X9 1142 aa28.25■■■□□ 2.11
COL13A1-203ENST00000398969 FAM26FQ5R3K3 315 aa28.25■■■□□ 2.11
COL13A1-203ENST00000398969 CCDC181Q5TID7 509 aa28.25■■■□□ 2.11
COL13A1-203ENST00000398969 NOX5Q96PH1 765 aa28.25■■■□□ 2.11
COL13A1-203ENST00000398969 NLRC4Q9NPP4 1024 aa28.25■■■□□ 2.11
COL13A1-203ENST00000398969 EHD2Q9NZN4 543 aa28.25■■■□□ 2.11
COL13A1-203ENST00000398969 NOL4O94818 638 aa28.24■■■□□ 2.11
COL13A1-203ENST00000398969 TDRD12Q587J7 1177 aaKnown RBP28.24■■■□□ 2.11
COL13A1-203ENST00000398969 KLHDC7AQ5VTJ3 777 aa28.24■■■□□ 2.11
COL13A1-203ENST00000398969 SND1Q7KZF4 910 aaKnown RBP eCLIP28.24■■■□□ 2.11
COL13A1-203ENST00000398969 RNF10Q8N5U6 811 aaKnown RBP28.24■■■□□ 2.11
COL13A1-203ENST00000398969 CUL5Q93034 780 aa28.24■■■□□ 2.11
COL13A1-203ENST00000398969 ZNF622Q969S3 477 aaKnown RBP eCLIP28.24■■■□□ 2.11
COL13A1-203ENST00000398969 TTLL1O95922 423 aa28.23■■■□□ 2.11
COL13A1-203ENST00000398969 TMX4Q9H1E5 349 aaPredicted RBP28.23■■■□□ 2.11
COL13A1-203ENST00000398969 TLR2O60603 784 aa28.23■■■□□ 2.11
COL13A1-203ENST00000398969 SLC9C1Q4G0N8 1177 aa28.23■■■□□ 2.11
COL13A1-203ENST00000398969 HAUS3Q68CZ6 603 aa28.23■■■□□ 2.11
COL13A1-203ENST00000398969 TTBK2Q6IQ55 1244 aa28.23■■■□□ 2.11
COL13A1-203ENST00000398969 SYN2Q92777 582 aaPredicted RBP28.23■■■□□ 2.11
COL13A1-203ENST00000398969 FGFBP2Q9BYJ0 223 aa28.23■■■□□ 2.11
COL13A1-203ENST00000398969 NUCKS1Q9H1E3 243 aaKnown RBP28.23■■■□□ 2.11
COL13A1-203ENST00000398969 BUB1O43683 1085 aa28.22■■■□□ 2.11
COL13A1-203ENST00000398969 MRPS25P82663 173 aaKnown RBP28.22■■■□□ 2.11
COL13A1-203ENST00000398969 SLC7A5Q01650 507 aa28.22■■■□□ 2.11
COL13A1-203ENST00000398969 SLC20A2Q08357 652 aa28.22■■■□□ 2.11
COL13A1-203ENST00000398969 HYIQ5T013 277 aa28.22■■■□□ 2.11
COL13A1-203ENST00000398969 FAM83BQ5T0W9 1011 aa28.22■■■□□ 2.11
COL13A1-203ENST00000398969 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.22■■■□□ 2.11
COL13A1-203ENST00000398969 PCDHA12Q9UN75 941 aa28.22■■■□□ 2.11
COL13A1-203ENST00000398969 PAFAH1B1P43034 410 aa28.22■■■□□ 2.11
COL13A1-203ENST00000398969 SFMBT2Q5VUG0 894 aa28.22■■■□□ 2.11
COL13A1-203ENST00000398969 CEP63Q96MT8 703 aa28.22■■■□□ 2.11
COL13A1-203ENST00000398969 STIM2Q9P246 746 aa28.22■■■□□ 2.11
COL13A1-203ENST00000398969 MARCH6O60337 910 aa28.21■■■□□ 2.11
COL13A1-203ENST00000398969 SERPING1P05155 500 aa28.21■■■□□ 2.11
COL13A1-203ENST00000398969 GCFC2P16383 781 aaKnown RBP28.21■■■□□ 2.11
COL13A1-203ENST00000398969 MRPL12P52815 198 aaKnown RBP28.21■■■□□ 2.11
COL13A1-203ENST00000398969 LSM14BQ9BX40 385 aaKnown RBP28.21■■■□□ 2.11
COL13A1-203ENST00000398969 NT5C3AQ9H0P0 336 aa28.21■■■□□ 2.11
COL13A1-203ENST00000398969 BMP2KQ9NSY1 1161 aaPredicted RBP28.21■■■□□ 2.11
COL13A1-203ENST00000398969 TBC1D7Q9P0N9 293 aa28.21■■■□□ 2.11
COL13A1-203ENST00000398969 MYH7BA7E2Y1 1941 aa28.21■■■□□ 2.11
COL13A1-203ENST00000398969 KDM3AQ9Y4C1 1321 aa28.21■■■□□ 2.11
COL13A1-203ENST00000398969 SSBP05455 408 aaKnown RBP eCLIP28.21■■■□□ 2.11
COL13A1-203ENST00000398969 DDX4Q9NQI0 724 aaKnown RBP28.21■■■□□ 2.11
COL13A1-203ENST00000398969 TSKSQ9UJT2 592 aa28.21■■■□□ 2.11
COL13A1-203ENST00000398969 PCDHA2Q9Y5H9 948 aa28.21■■■□□ 2.11
COL13A1-203ENST00000398969 TRIM66O15016 1216 aa28.2■■■□□ 2.11
COL13A1-203ENST00000398969 E9PMD0 336 aa28.2■■■□□ 2.1
COL13A1-203ENST00000398969 H0YIN7 160 aa28.2■■■□□ 2.1
COL13A1-203ENST00000398969 EPHB4P54760 987 aa28.2■■■□□ 2.1
COL13A1-203ENST00000398969 FAM76AQ8TAV0 307 aa28.2■■■□□ 2.1
COL13A1-203ENST00000398969 RBM12Q9NTZ6 932 aaKnown RBP28.2■■■□□ 2.1
COL13A1-203ENST00000398969 STK32BQ9NY57 414 aa28.2■■■□□ 2.1
COL13A1-203ENST00000398969 SUGT1Q9Y2Z0 365 aa28.2■■■□□ 2.1
COL13A1-203ENST00000398969 C10orf71Q711Q0 1435 aa28.19■■■□□ 2.1
COL13A1-203ENST00000398969 ZBTB5O15062 677 aa28.19■■■□□ 2.1
COL13A1-203ENST00000398969 GNA14O95837 355 aa28.19■■■□□ 2.1
COL13A1-203ENST00000398969 SLC16A2P36021 539 aa28.19■■■□□ 2.1
COL13A1-203ENST00000398969 NAP1L1P55209 391 aaKnown RBP28.19■■■□□ 2.1
COL13A1-203ENST00000398969 MARSP56192 900 aaKnown RBP28.19■■■□□ 2.1
COL13A1-203ENST00000398969 POLR2FP61218 127 aaKnown RBP28.19■■■□□ 2.1
COL13A1-203ENST00000398969 DOK7Q18PE1 504 aa28.19■■■□□ 2.1
COL13A1-203ENST00000398969 TRIM59Q8IWR1 403 aa28.19■■■□□ 2.1
COL13A1-203ENST00000398969 ZFP91Q96JP5 570 aaPredicted RBP28.19■■■□□ 2.1
COL13A1-203ENST00000398969 PSTPIP2Q9H939 334 aa28.19■■■□□ 2.1
COL13A1-203ENST00000398969 GOLGA6CA6NDK9 693 aa28.18■■■□□ 2.1
COL13A1-203ENST00000398969 USP17L10C9JJH3 530 aa28.18■■■□□ 2.1
COL13A1-203ENST00000398969 GOLGA6DP0CG33 693 aa28.18■■■□□ 2.1
COL13A1-203ENST00000398969 TNFRSF8P28908 595 aa28.18■■■□□ 2.1
COL13A1-203ENST00000398969 NELFCDQ8IXH7 590 aa28.18■■■□□ 2.1
COL13A1-203ENST00000398969 CCDC65Q8IXS2 484 aa28.18■■■□□ 2.1
COL13A1-203ENST00000398969 C10orf67Q8IYJ2 551 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms