RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 UPF3BQ9BZI7 483 aaKnown RBP16.59■□□□□ 0.25
RAB1A-201ENST00000398529 CNNM2Q9H8M5 875 aa16.59■□□□□ 0.25
RAB1A-201ENST00000398529 DIAPH3Q9NSV4 1193 aa16.59■□□□□ 0.25
RAB1A-201ENST00000398529 PCDHA1Q9Y5I3 950 aa16.59■□□□□ 0.25
RAB1A-201ENST00000398529 B4E1Z4 1266 aa16.58■□□□□ 0.24
RAB1A-201ENST00000398529 H3BNC9 293 aa16.58■□□□□ 0.24
RAB1A-201ENST00000398529 H3BRB1 525 aa16.58■□□□□ 0.24
RAB1A-201ENST00000398529 DCXO43602 365 aa16.58■□□□□ 0.24
RAB1A-201ENST00000398529 HOXD8P13378 290 aaPredicted RBP16.58■□□□□ 0.24
RAB1A-201ENST00000398529 HSD17B4P51659 736 aa16.58■□□□□ 0.24
RAB1A-201ENST00000398529 HSDL1Q3SXM5 330 aa16.58■□□□□ 0.24
RAB1A-201ENST00000398529 GNPTABQ3T906 1256 aa16.58■□□□□ 0.24
RAB1A-201ENST00000398529 IFIT1BQ5T764 474 aaKnown RBP16.58■□□□□ 0.24
RAB1A-201ENST00000398529 TRAF7Q6Q0C0 670 aa16.58■□□□□ 0.24
RAB1A-201ENST00000398529 ALYREFQ86V81 257 aaKnown RBP16.58■□□□□ 0.24
RAB1A-201ENST00000398529 VSIG10LQ86VR7 867 aa16.58■□□□□ 0.24
RAB1A-201ENST00000398529 ENAHQ8N8S7 591 aaPredicted RBP16.58■□□□□ 0.24
RAB1A-201ENST00000398529 SP7Q8TDD2 431 aaPredicted RBP16.58■□□□□ 0.24
RAB1A-201ENST00000398529 APBB2Q92870 758 aa16.58■□□□□ 0.24
RAB1A-201ENST00000398529 WNT8BQ93098 351 aa16.58■□□□□ 0.24
RAB1A-201ENST00000398529 PABPC5Q96DU9 382 aaKnown RBP16.58■□□□□ 0.24
RAB1A-201ENST00000398529 PDCD2LQ9BRP1 358 aa16.58■□□□□ 0.24
RAB1A-201ENST00000398529 NSUN3Q9H649 340 aaKnown RBP16.58■□□□□ 0.24
RAB1A-201ENST00000398529 TUT1Q9H6E5 874 aaKnown RBP16.58■□□□□ 0.24
RAB1A-201ENST00000398529 PRKAG3Q9UGI9 489 aa16.58■□□□□ 0.24
RAB1A-201ENST00000398529 KAT6AQ92794 2004 aa16.58■□□□□ 0.24
RAB1A-201ENST00000398529 NLRC5Q86WI3 1866 aa16.57■□□□□ 0.24
RAB1A-201ENST00000398529 LAMA4Q16363 1823 aa16.57■□□□□ 0.24
RAB1A-201ENST00000398529 KLRF2D3W0D1 207 aa16.57■□□□□ 0.24
RAB1A-201ENST00000398529 H3BQ06 376 aaPredicted RBP16.57■□□□□ 0.24
RAB1A-201ENST00000398529 GCOM1H8Y6P7 765 aaPredicted RBP16.57■□□□□ 0.24
RAB1A-201ENST00000398529 HIP1O00291 1037 aa16.57■□□□□ 0.24
RAB1A-201ENST00000398529 POLR2MP0CAP2 368 aa16.57■□□□□ 0.24
RAB1A-201ENST00000398529 STOX1Q6ZVD7 989 aa16.57■□□□□ 0.24
RAB1A-201ENST00000398529 TMEM192Q8IY95 271 aa16.57■□□□□ 0.24
RAB1A-201ENST00000398529 NEK9Q8TD19 979 aa16.57■□□□□ 0.24
RAB1A-201ENST00000398529 TOP1MTQ969P6 601 aa16.57■□□□□ 0.24
RAB1A-201ENST00000398529 USP26Q9BXU7 913 aa16.57■□□□□ 0.24
RAB1A-201ENST00000398529 IFIH1Q9BYX4 1025 aaKnown RBP16.57■□□□□ 0.24
RAB1A-201ENST00000398529 ZSWIM5Q9P217 1185 aa16.57■□□□□ 0.24
RAB1A-201ENST00000398529 ZBTB5O15062 677 aa16.56■□□□□ 0.24
RAB1A-201ENST00000398529 SMIM10L2AP0DMW4 78 aa16.56■□□□□ 0.24
RAB1A-201ENST00000398529 SMIM10L2BP0DMW5 78 aa16.56■□□□□ 0.24
RAB1A-201ENST00000398529 HOXA13P31271 388 aaPredicted RBP16.56■□□□□ 0.24
RAB1A-201ENST00000398529 PGM5Q15124 567 aa16.56■□□□□ 0.24
RAB1A-201ENST00000398529 CWC27Q6UX04 472 aaKnown RBP16.56■□□□□ 0.24
RAB1A-201ENST00000398529 IL17RAQ96F46 866 aa16.56■□□□□ 0.24
RAB1A-201ENST00000398529 C16orf70Q9BSU1 422 aa16.56■□□□□ 0.24
RAB1A-201ENST00000398529 KCNH6Q9H252 994 aa16.56■□□□□ 0.24
RAB1A-201ENST00000398529 CLDND1Q9NY35 253 aa16.56■□□□□ 0.24
RAB1A-201ENST00000398529 ZNF215Q9UL58 517 aaPredicted RBP16.56■□□□□ 0.24
RAB1A-201ENST00000398529 RWDD3Q9Y3V2 267 aa16.56■□□□□ 0.24
RAB1A-201ENST00000398529 RALGAPA2Q2PPJ7 1873 aa16.55■□□□□ 0.24
RAB1A-201ENST00000398529 CTSHP09668 335 aa16.55■□□□□ 0.24
RAB1A-201ENST00000398529 UBA1P22314 1058 aaKnown RBP16.55■□□□□ 0.24
RAB1A-201ENST00000398529 NEDD9Q14511 834 aa16.55■□□□□ 0.24
RAB1A-201ENST00000398529 TCEAL5Q5H9L2 206 aa16.55■□□□□ 0.24
RAB1A-201ENST00000398529 FCHSD1Q86WN1 690 aa16.55■□□□□ 0.24
RAB1A-201ENST00000398529 FIBCD1Q8N539 461 aa16.55■□□□□ 0.24
RAB1A-201ENST00000398529 POP1Q99575 1024 aaKnown RBP16.55■□□□□ 0.24
RAB1A-201ENST00000398529 TREHO43280 583 aa16.54■□□□□ 0.24
RAB1A-201ENST00000398529 STAM2O75886 525 aa16.54■□□□□ 0.24
RAB1A-201ENST00000398529 RGS20O76081 388 aa16.54■□□□□ 0.24
RAB1A-201ENST00000398529 LGALS2P05162 132 aa16.54■□□□□ 0.24
RAB1A-201ENST00000398529 RB1P06400 928 aa16.54■□□□□ 0.24
RAB1A-201ENST00000398529 GHRHRQ02643 423 aa16.54■□□□□ 0.24
RAB1A-201ENST00000398529 TRDNQ13061 729 aa16.54■□□□□ 0.24
RAB1A-201ENST00000398529 HOMER1Q86YM7 354 aa16.54■□□□□ 0.24
RAB1A-201ENST00000398529 C11orf84Q9BUA3 381 aaPredicted RBP16.54■□□□□ 0.24
RAB1A-201ENST00000398529 RNPEPQ9H4A4 650 aa16.54■□□□□ 0.24
RAB1A-201ENST00000398529 CHMLP26374 656 aa16.53■□□□□ 0.24
RAB1A-201ENST00000398529 CTNNB1P35222 781 aa16.53■□□□□ 0.24
RAB1A-201ENST00000398529 SP2Q02086 613 aa16.53■□□□□ 0.24
RAB1A-201ENST00000398529 HIC1Q14526 733 aa16.53■□□□□ 0.24
RAB1A-201ENST00000398529 RSPH3Q86UC2 560 aa16.53■□□□□ 0.24
RAB1A-201ENST00000398529 ADHFE1Q8IWW8 467 aa16.53■□□□□ 0.24
RAB1A-201ENST00000398529 STAG2Q8N3U4 1231 aa16.53■□□□□ 0.24
RAB1A-201ENST00000398529 DSCC1Q9BVC3 393 aa16.53■□□□□ 0.24
RAB1A-201ENST00000398529 LMAN2LQ9H0V9 348 aa16.53■□□□□ 0.24
RAB1A-201ENST00000398529 ERICH2A1L162 156 aa16.52■□□□□ 0.24
RAB1A-201ENST00000398529 OPLAHO14841 1288 aa16.52■□□□□ 0.24
RAB1A-201ENST00000398529 ARHGAP4P98171 946 aa16.52■□□□□ 0.24
RAB1A-201ENST00000398529 METTL7BQ6UX53 244 aa16.52■□□□□ 0.24
RAB1A-201ENST00000398529 PPP2R3CQ969Q6 453 aa16.52■□□□□ 0.24
RAB1A-201ENST00000398529 MFSD14AQ96MC6 490 aa16.52■□□□□ 0.24
RAB1A-201ENST00000398529 SETD4Q9NVD3 440 aa16.52■□□□□ 0.24
RAB1A-201ENST00000398529 CDC45O75419 566 aa16.51■□□□□ 0.23
RAB1A-201ENST00000398529 MRE11P49959 708 aa16.51■□□□□ 0.23
RAB1A-201ENST00000398529 ZP2Q05996 745 aa16.51■□□□□ 0.23
RAB1A-201ENST00000398529 MKRN4PQ13434 485 aaPredicted RBP16.51■□□□□ 0.23
RAB1A-201ENST00000398529 CYFIP1Q7L576 1253 aa16.51■□□□□ 0.23
RAB1A-201ENST00000398529 RPAINQ86UA6 219 aa16.51■□□□□ 0.23
RAB1A-201ENST00000398529 GIMAP8Q8ND71 665 aaPredicted RBP16.51■□□□□ 0.23
RAB1A-201ENST00000398529 IL31RAQ8NI17 732 aa16.51■□□□□ 0.23
RAB1A-201ENST00000398529 ZFP91Q96JP5 570 aaPredicted RBP16.51■□□□□ 0.23
RAB1A-201ENST00000398529 PNMA6FA0A0J9YX94 578 aa16.5■□□□□ 0.23
RAB1A-201ENST00000398529 POTEB3A0JP26 581 aa16.5■□□□□ 0.23
RAB1A-201ENST00000398529 PALM3A6NDB9 673 aaPredicted RBP16.5■□□□□ 0.23
RAB1A-201ENST00000398529 FIBPO43427 364 aa16.5■□□□□ 0.23
RAB1A-201ENST00000398529 HOXC8P31273 242 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms