RNA–Protein interactions for RNA: ENST00000397042.7

RALGAPB-203, Transcript of Ral GTPase activating protein non-catalytic beta subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RALGAPB, Length 8,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPB-203ENST00000397042 EXOC3L4Q17RC7 722 aa13.1□□□□□ -0.31
RALGAPB-203ENST00000397042 RNF219Q5W0B1 726 aaPredicted RBP13.1□□□□□ -0.31
RALGAPB-203ENST00000397042 NOP53Q9NZM5 478 aaKnown RBP13.1□□□□□ -0.31
RALGAPB-203ENST00000397042 PRKAG2Q9UGJ0 569 aa13.1□□□□□ -0.31
RALGAPB-203ENST00000397042 DDX25Q9UHL0 483 aaKnown RBP13.1□□□□□ -0.31
RALGAPB-203ENST00000397042 CSADQ9Y600 493 aa13.1□□□□□ -0.31
RALGAPB-203ENST00000397042 H0Y626 953 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 DTNBO60941 627 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 TRIM16O95361 564 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 PDCD6IPQ8WUM4 868 aaKnown RBP13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 CNOT10Q9H9A5 744 aaKnown RBP13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 ARHGAP26Q9UNA1 814 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 FAM47AQ5JRC9 791 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 HSPH1Q92598 858 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 USE1Q9NZ43 259 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 RWDD2BP57060 319 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 DDB1Q16531 1140 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 NDUFAF2Q8N183 169 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 TTC17Q96AE7 1141 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 SRPK1Q96SB4 655 aaKnown RBP13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 SESN1Q9Y6P5 492 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 GPAA1O43292 621 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 SLITRK6Q9H5Y7 841 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 ATP8B3O60423 1300 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 SCG2P13521 617 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 TMPRSS15P98073 1019 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 TRAPPC3LQ5T215 181 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 PLD3Q8IV08 490 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 SLFN12Q8IYM2 578 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 RUBCNLQ9H714 662 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 ACTR5Q9H9F9 607 aaPredicted RBP13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 GUCA1CO95843 209 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 CENPAP49450 140 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 DHX9Q08211 1270 aaKnown RBP13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 WASHC5Q12768 1159 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 KRT72Q14CN4 511 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 ALS2CLQ60I27 953 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 RNF139Q8WU17 664 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 PAPOLBQ9NRJ5 636 aaKnown RBP13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 COBLO75128 1261 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 CXCR5P32302 372 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 EPHB4P54760 987 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 KRT40Q6A162 431 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 ULK4Q96C45 1275 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 YIPF2Q9BWQ6 316 aa13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 APOBEC2Q9Y235 224 aaKnown RBP13.09□□□□□ -0.31
RALGAPB-203ENST00000397042 PDE6BP35913 854 aa13.08□□□□□ -0.31
RALGAPB-203ENST00000397042 EFTUD2Q15029 972 aaKnown RBP eCLIP13.08□□□□□ -0.31
RALGAPB-203ENST00000397042 AFF4Q9UHB7 1163 aaKnown RBP13.08□□□□□ -0.31
RALGAPB-203ENST00000397042 PCDHA12Q9UN75 941 aa13.08□□□□□ -0.31
RALGAPB-203ENST00000397042 POLIQ9UNA4 740 aa13.08□□□□□ -0.31
RALGAPB-203ENST00000397042 FAM135AQ9P2D6 1515 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 DCTN3O75935 186 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 CHGBP05060 677 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 CHMP1BQ7LBR1 199 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 NEK8Q86SG6 692 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 GJA10Q969M2 543 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 TMEM245Q9H330 911 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 SENP1Q9P0U3 644 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 ERICH3Q5RHP9 1530 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 CFAP69A5D8W1 941 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 XPOTO43592 962 aaKnown RBP13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 LRRN2O75325 713 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 FAM160B1Q5W0V3 765 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 SH3KBP1Q96B97 665 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 TEKT3Q9BXF9 490 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 PRPSAP2O60256 369 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 S100A5P33763 92 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 NNTQ13423 1086 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 SIX6OS1Q8N1H7 587 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 DNAJC17Q9NVM6 304 aaKnown RBP13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 LRRC9Q6ZRR7 1453 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 NEMP1O14524 444 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 ITGA6P23229 1130 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 SH3BP5LQ7L8J4 393 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 KCTD17Q8N5Z5 321 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 ARHGEF3Q9NR81 526 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 SEL1LQ9UBV2 794 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 TRIM71Q2Q1W2 868 aaKnown RBP13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 PYROXD1Q8WU10 500 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 TRIM11Q96F44 468 aa13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 SMAD5Q99717 465 aaKnown RBP13.08□□□□□ -0.32
RALGAPB-203ENST00000397042 HNRNPDLO14979 420 aaKnown RBP13.07□□□□□ -0.32
RALGAPB-203ENST00000397042 TFDP1Q14186 410 aa13.07□□□□□ -0.32
RALGAPB-203ENST00000397042 AOC3Q16853 763 aa13.07□□□□□ -0.32
RALGAPB-203ENST00000397042 FTOQ9C0B1 505 aaKnown RBP eCLIP13.07□□□□□ -0.32
RALGAPB-203ENST00000397042 SYNDIG1Q9H7V2 258 aa13.07□□□□□ -0.32
RALGAPB-203ENST00000397042 PSTPIP2Q9H939 334 aa13.07□□□□□ -0.32
RALGAPB-203ENST00000397042 BPIFB4P59827 614 aa13.07□□□□□ -0.32
RALGAPB-203ENST00000397042 BBS9Q3SYG4 887 aa13.07□□□□□ -0.32
RALGAPB-203ENST00000397042 SULF1Q8IWU6 871 aa13.07□□□□□ -0.32
RALGAPB-203ENST00000397042 NT5C1BQ96P26 610 aa13.07□□□□□ -0.32
RALGAPB-203ENST00000397042 LRRC4Q9HBW1 653 aa13.07□□□□□ -0.32
RALGAPB-203ENST00000397042 EPRSP07814 1512 aaKnown RBP13.07□□□□□ -0.32
RALGAPB-203ENST00000397042 NFKBIAP25963 317 aa13.07□□□□□ -0.32
RALGAPB-203ENST00000397042 NR5A1Q13285 461 aa13.07□□□□□ -0.32
RALGAPB-203ENST00000397042 LRRC8BQ6P9F7 803 aa13.07□□□□□ -0.32
RALGAPB-203ENST00000397042 DPP8Q6V1X1 898 aaPredicted RBP13.07□□□□□ -0.32
RALGAPB-203ENST00000397042 CMTR1Q8N1G2 835 aaKnown RBP13.07□□□□□ -0.32
RALGAPB-203ENST00000397042 TMEM161AQ9NX61 479 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms