RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 C8orf76Q96K31 380 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 AGO4Q9HCK5 861 aaKnown RBP18.84■□□□□ 0.61
CXCL1-201ENST00000395761 ATP11BQ9Y2G3 1177 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 ALPK3Q96L96 1907 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 KPNA6O60684 536 aa18.83■□□□□ 0.6
CXCL1-201ENST00000395761 CABYRO75952 493 aa18.83■□□□□ 0.6
CXCL1-201ENST00000395761 SP4Q02446 784 aa18.83■□□□□ 0.6
CXCL1-201ENST00000395761 ITGB3BPQ13352 177 aaPredicted RBP18.83■□□□□ 0.6
CXCL1-201ENST00000395761 DGKDQ16760 1214 aa18.83■□□□□ 0.6
CXCL1-201ENST00000395761 C1orf53Q5VUE5 145 aa18.83■□□□□ 0.6
CXCL1-201ENST00000395761 PIK3AP1Q6ZUJ8 805 aa18.83■□□□□ 0.6
CXCL1-201ENST00000395761 PPP1R13LQ8WUF5 828 aa18.83■□□□□ 0.6
CXCL1-201ENST00000395761 MTG1Q9BT17 334 aaPredicted RBP18.83■□□□□ 0.6
CXCL1-201ENST00000395761 PCDH10Q9P2E7 1040 aa18.83■□□□□ 0.6
CXCL1-201ENST00000395761 MYH7BA7E2Y1 1941 aa18.82■□□□□ 0.6
CXCL1-201ENST00000395761 A0A0U1RQG5 324 aaPredicted RBP18.82■□□□□ 0.6
CXCL1-201ENST00000395761 CCDC194A0A1B0GVG4 234 aa18.82■□□□□ 0.6
CXCL1-201ENST00000395761 PPFIA4O75335 1185 aa18.82■□□□□ 0.6
CXCL1-201ENST00000395761 HOXD8P13378 290 aaPredicted RBP18.82■□□□□ 0.6
CXCL1-201ENST00000395761 CDK7P50613 346 aa18.82■□□□□ 0.6
CXCL1-201ENST00000395761 TLE2Q04725 743 aa18.82■□□□□ 0.6
CXCL1-201ENST00000395761 PRR16Q569H4 304 aa18.82■□□□□ 0.6
CXCL1-201ENST00000395761 DIS3L2Q8IYB7 885 aaKnown RBP18.82■□□□□ 0.6
CXCL1-201ENST00000395761 GIMAP8Q8ND71 665 aaPredicted RBP18.82■□□□□ 0.6
CXCL1-201ENST00000395761 FBXO18Q8NFZ0 1043 aa18.82■□□□□ 0.6
CXCL1-201ENST00000395761 KAT2BQ92831 832 aa18.82■□□□□ 0.6
CXCL1-201ENST00000395761 LENG9Q96B70 501 aa18.82■□□□□ 0.6
CXCL1-201ENST00000395761 GPR20Q99678 358 aa18.82■□□□□ 0.6
CXCL1-201ENST00000395761 K7ELQ4 463 aaPredicted RBP18.81■□□□□ 0.6
CXCL1-201ENST00000395761 ARVCFO00192 962 aa18.81■□□□□ 0.6
CXCL1-201ENST00000395761 PQBP1O60828 265 aaKnown RBP18.81■□□□□ 0.6
CXCL1-201ENST00000395761 TDP2O95551 362 aa18.81■□□□□ 0.6
CXCL1-201ENST00000395761 ZNF286BP0CG31 522 aa18.81■□□□□ 0.6
CXCL1-201ENST00000395761 GJB2P29033 226 aa18.81■□□□□ 0.6
CXCL1-201ENST00000395761 CUL4AQ13619 759 aa18.81■□□□□ 0.6
CXCL1-201ENST00000395761 ITGA7Q13683 1181 aa18.81■□□□□ 0.6
CXCL1-201ENST00000395761 SLC43A3Q8NBI5 491 aa18.81■□□□□ 0.6
CXCL1-201ENST00000395761 BRMS1Q9HCU9 246 aa18.81■□□□□ 0.6
CXCL1-201ENST00000395761 DNAH12Q6ZR08 3092 aa18.8■□□□□ 0.6
CXCL1-201ENST00000395761 DOCK5Q9H7D0 1870 aa18.8■□□□□ 0.6
CXCL1-201ENST00000395761 CYP3A7-CYP3A51PA0A087WV96 503 aa18.8■□□□□ 0.6
CXCL1-201ENST00000395761 H0YGN5 161 aa18.8■□□□□ 0.6
CXCL1-201ENST00000395761 NOP56O00567 594 aaKnown RBP18.8■□□□□ 0.6
CXCL1-201ENST00000395761 DHX15O43143 795 aaKnown RBP18.8■□□□□ 0.6
CXCL1-201ENST00000395761 CYP3A7P24462 503 aa18.8■□□□□ 0.6
CXCL1-201ENST00000395761 ANP32AP39687 249 aaKnown RBP18.8■□□□□ 0.6
CXCL1-201ENST00000395761 CHMP4BP1P59074 171 aa18.8■□□□□ 0.6
CXCL1-201ENST00000395761 NBPF20Q3BBV1 942 aa18.8■□□□□ 0.6
CXCL1-201ENST00000395761 HSCBQ8IWL3 235 aa18.8■□□□□ 0.6
CXCL1-201ENST00000395761 PDE4DIPQ5VU43 2346 aa18.8■□□□□ 0.6
CXCL1-201ENST00000395761 NFASCO94856 1347 aa18.79■□□□□ 0.6
CXCL1-201ENST00000395761 GSTTP1A0A1W2PQM5 241 aa18.79■□□□□ 0.6
CXCL1-201ENST00000395761 IPO5O00410 1097 aaKnown RBP18.79■□□□□ 0.6
CXCL1-201ENST00000395761 SYN1P17600 705 aa18.79■□□□□ 0.6
CXCL1-201ENST00000395761 LETM2Q2VYF4 491 aa18.79■□□□□ 0.6
CXCL1-201ENST00000395761 ANKRD33Q7Z3H0 272 aa18.79■□□□□ 0.6
CXCL1-201ENST00000395761 NEK8Q86SG6 692 aa18.79■□□□□ 0.6
CXCL1-201ENST00000395761 GJA10Q969M2 543 aa18.79■□□□□ 0.6
CXCL1-201ENST00000395761 MBOAT7Q96N66 472 aa18.79■□□□□ 0.6
CXCL1-201ENST00000395761 SDF4Q9BRK5 362 aa18.79■□□□□ 0.6
CXCL1-201ENST00000395761 ZNF577Q9BSK1 485 aa18.79■□□□□ 0.6
CXCL1-201ENST00000395761 C16orf70Q9BSU1 422 aa18.79■□□□□ 0.6
CXCL1-201ENST00000395761 JPH1Q9HDC5 661 aaPredicted RBP18.79■□□□□ 0.6
CXCL1-201ENST00000395761 SLC9A2Q9UBY0 812 aa18.79■□□□□ 0.6
CXCL1-201ENST00000395761 ZMYND8Q9ULU4 1186 aaPredicted RBP18.79■□□□□ 0.6
CXCL1-201ENST00000395761 SMC3Q9UQE7 1217 aa18.79■□□□□ 0.6
CXCL1-201ENST00000395761 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.79■□□□□ 0.6
CXCL1-201ENST00000395761 NR2E3Q9Y5X4 410 aa18.79■□□□□ 0.6
CXCL1-201ENST00000395761 DDX39AO00148 427 aaKnown RBP18.78■□□□□ 0.6
CXCL1-201ENST00000395761 MSH4O15457 936 aa18.78■□□□□ 0.6
CXCL1-201ENST00000395761 CCNE2O96020 404 aa18.78■□□□□ 0.6
CXCL1-201ENST00000395761 LGALS2P05162 132 aa18.78■□□□□ 0.6
CXCL1-201ENST00000395761 SETQ01105 290 aaPredicted RBP18.78■□□□□ 0.6
CXCL1-201ENST00000395761 BECN1Q14457 450 aa18.78■□□□□ 0.6
CXCL1-201ENST00000395761 SAFBQ15424 915 aaKnown RBP eCLIP18.78■□□□□ 0.6
CXCL1-201ENST00000395761 Q4G0T1 1027 aa18.78■□□□□ 0.6
CXCL1-201ENST00000395761 UTP14CQ5TAP6 766 aaKnown RBP18.78■□□□□ 0.6
CXCL1-201ENST00000395761 SH3RF1Q7Z6J0 888 aa18.78■□□□□ 0.6
CXCL1-201ENST00000395761 POTEDQ86YR6 584 aa18.78■□□□□ 0.6
CXCL1-201ENST00000395761 TOX2Q96NM4 488 aa18.78■□□□□ 0.6
CXCL1-201ENST00000395761 KIF28PB7ZC32 967 aa18.77■□□□□ 0.6
CXCL1-201ENST00000395761 SLC37A4O43826 429 aa18.77■□□□□ 0.6
CXCL1-201ENST00000395761 F2P00734 622 aa18.77■□□□□ 0.6
CXCL1-201ENST00000395761 TCF7P36402 384 aaPredicted RBP18.77■□□□□ 0.6
CXCL1-201ENST00000395761 PSEN2P49810 448 aa18.77■□□□□ 0.6
CXCL1-201ENST00000395761 FAAP100Q0VG06 881 aa18.77■□□□□ 0.6
CXCL1-201ENST00000395761 MFSD10Q14728 455 aa18.77■□□□□ 0.6
CXCL1-201ENST00000395761 MOXD1Q6UVY6 613 aa18.77■□□□□ 0.6
CXCL1-201ENST00000395761 TRIM50Q86XT4 487 aa18.77■□□□□ 0.6
CXCL1-201ENST00000395761 FAM126BQ8IXS8 530 aa18.77■□□□□ 0.6
CXCL1-201ENST00000395761 SEPT1Q8WYJ6 367 aa18.77■□□□□ 0.6
CXCL1-201ENST00000395761 TRPV6Q9H1D0 765 aa18.77■□□□□ 0.6
CXCL1-201ENST00000395761 DDX25Q9UHL0 483 aaKnown RBP18.77■□□□□ 0.6
CXCL1-201ENST00000395761 DCDC2CA8MYV0 355 aa18.76■□□□□ 0.59
CXCL1-201ENST00000395761 HAS3O00219 553 aa18.76■□□□□ 0.59
CXCL1-201ENST00000395761 WNT7AO00755 349 aa18.76■□□□□ 0.59
CXCL1-201ENST00000395761 CCNT1O60563 726 aaKnown RBP18.76■□□□□ 0.59
CXCL1-201ENST00000395761 ACTR2P61160 394 aa18.76■□□□□ 0.59
CXCL1-201ENST00000395761 KIAA0753Q2KHM9 967 aa18.76■□□□□ 0.59
CXCL1-201ENST00000395761 FAM47CQ5HY64 1035 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 263.6 ms