RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 CTSHP09668 335 aa18.44■□□□□ 0.54
SNCA-205ENST00000394991 LTBRP36941 435 aa18.44■□□□□ 0.54
SNCA-205ENST00000394991 ENAHQ8N8S7 591 aaPredicted RBP18.44■□□□□ 0.54
SNCA-205ENST00000394991 SEPT8Q92599 483 aa18.44■□□□□ 0.54
SNCA-205ENST00000394991 ATP6V0A1Q93050 837 aa18.44■□□□□ 0.54
SNCA-205ENST00000394991 ZFP91Q96JP5 570 aaPredicted RBP18.44■□□□□ 0.54
SNCA-205ENST00000394991 BCAS3Q9H6U6 928 aa18.44■□□□□ 0.54
SNCA-205ENST00000394991 PRKAG3Q9UGI9 489 aa18.44■□□□□ 0.54
SNCA-205ENST00000394991 B4E1Z4 1266 aa18.43■□□□□ 0.54
SNCA-205ENST00000394991 PARP1P09874 1014 aaKnown RBP18.43■□□□□ 0.54
SNCA-205ENST00000394991 SMIM10L2AP0DMW4 78 aa18.43■□□□□ 0.54
SNCA-205ENST00000394991 SMIM10L2BP0DMW5 78 aa18.43■□□□□ 0.54
SNCA-205ENST00000394991 PGM5Q15124 567 aa18.43■□□□□ 0.54
SNCA-205ENST00000394991 RPAINQ86UA6 219 aa18.43■□□□□ 0.54
SNCA-205ENST00000394991 VSIG10LQ86VR7 867 aa18.43■□□□□ 0.54
SNCA-205ENST00000394991 IQCA1Q86XH1 822 aa18.43■□□□□ 0.54
SNCA-205ENST00000394991 ADHFE1Q8IWW8 467 aa18.43■□□□□ 0.54
SNCA-205ENST00000394991 STAG2Q8N3U4 1231 aa18.43■□□□□ 0.54
SNCA-205ENST00000394991 CLDND1Q9NY35 253 aa18.43■□□□□ 0.54
SNCA-205ENST00000394991 LGALS2P05162 132 aa18.42■□□□□ 0.54
SNCA-205ENST00000394991 LINC00271P0C7V0 271 aa18.42■□□□□ 0.54
SNCA-205ENST00000394991 HOXA13P31271 388 aaPredicted RBP18.42■□□□□ 0.54
SNCA-205ENST00000394991 IRS1P35568 1242 aa18.42■□□□□ 0.54
SNCA-205ENST00000394991 KCNV1Q6PIU1 500 aa18.42■□□□□ 0.54
SNCA-205ENST00000394991 STOX1Q6ZVD7 989 aa18.42■□□□□ 0.54
SNCA-205ENST00000394991 HFE2Q6ZVN8 426 aa18.42■□□□□ 0.54
SNCA-205ENST00000394991 TICAM2Q86XR7 235 aa18.42■□□□□ 0.54
SNCA-205ENST00000394991 ZSCAN10Q96SZ4 725 aaPredicted RBP18.42■□□□□ 0.54
SNCA-205ENST00000394991 AMNQ9BXJ7 453 aa18.42■□□□□ 0.54
SNCA-205ENST00000394991 RNPEPQ9H4A4 650 aa18.42■□□□□ 0.54
SNCA-205ENST00000394991 FAM50BQ9Y247 325 aa18.42■□□□□ 0.54
SNCA-205ENST00000394991 TTC3P53804 2025 aa18.42■□□□□ 0.54
SNCA-205ENST00000394991 H3BRB1 525 aa18.41■□□□□ 0.54
SNCA-205ENST00000394991 ZNF213O14771 459 aa18.41■□□□□ 0.54
SNCA-205ENST00000394991 DLX2Q07687 328 aaPredicted RBP18.41■□□□□ 0.54
SNCA-205ENST00000394991 CTC1Q2NKJ3 1217 aa18.41■□□□□ 0.54
SNCA-205ENST00000394991 CCDC178Q5BJE1 867 aa18.41■□□□□ 0.54
SNCA-205ENST00000394991 MTMR8Q96EF0 704 aa18.41■□□□□ 0.54
SNCA-205ENST00000394991 IFIH1Q9BYX4 1025 aaKnown RBP18.41■□□□□ 0.54
SNCA-205ENST00000394991 KCNH6Q9H252 994 aa18.41■□□□□ 0.54
SNCA-205ENST00000394991 TUT1Q9H6E5 874 aaKnown RBP18.41■□□□□ 0.54
SNCA-205ENST00000394991 CAND2O75155 1236 aa18.4■□□□□ 0.54
SNCA-205ENST00000394991 CTNNB1P35222 781 aa18.4■□□□□ 0.54
SNCA-205ENST00000394991 CLUL1Q15846 466 aa18.4■□□□□ 0.54
SNCA-205ENST00000394991 MLXIPQ9HAP2 919 aa18.4■□□□□ 0.54
SNCA-205ENST00000394991 ZSWIM5Q9P217 1185 aa18.4■□□□□ 0.54
SNCA-205ENST00000394991 ZBTB47Q9UFB7 747 aaPredicted RBP18.4■□□□□ 0.54
SNCA-205ENST00000394991 LOXHD1Q8IVV2 1947 aa18.4■□□□□ 0.54
SNCA-205ENST00000394991 TRIM6-TRIM34B2RNG4 842 aa18.39■□□□□ 0.53
SNCA-205ENST00000394991 C5orf67F2Z3F1 127 aa18.39■□□□□ 0.53
SNCA-205ENST00000394991 GRM6O15303 877 aa18.39■□□□□ 0.53
SNCA-205ENST00000394991 TGFB3P10600 412 aa18.39■□□□□ 0.53
SNCA-205ENST00000394991 NT5C2P49902 561 aa18.39■□□□□ 0.53
SNCA-205ENST00000394991 HYAL1Q12794 435 aa18.39■□□□□ 0.53
SNCA-205ENST00000394991 SMAD2Q15796 467 aaKnown RBP18.39■□□□□ 0.53
SNCA-205ENST00000394991 SLC35G1Q2M3R5 365 aa18.39■□□□□ 0.53
SNCA-205ENST00000394991 SETD4Q9NVD3 440 aa18.39■□□□□ 0.53
SNCA-205ENST00000394991 MAP3K20Q9NYL2 800 aaKnown RBP18.39■□□□□ 0.53
SNCA-205ENST00000394991 MUTYHQ9UIF7 546 aa18.39■□□□□ 0.53
SNCA-205ENST00000394991 TELO2Q9Y4R8 837 aa18.39■□□□□ 0.53
SNCA-205ENST00000394991 KMT2EQ8IZD2 1858 aa18.39■□□□□ 0.53
SNCA-205ENST00000394991 MBTPS2O43462 519 aa18.38■□□□□ 0.53
SNCA-205ENST00000394991 SDSP20132 328 aa18.38■□□□□ 0.53
SNCA-205ENST00000394991 CCND2P30279 289 aa18.38■□□□□ 0.53
SNCA-205ENST00000394991 SEMA3FQ13275 785 aa18.38■□□□□ 0.53
SNCA-205ENST00000394991 FAM26DQ5JW98 314 aa18.38■□□□□ 0.53
SNCA-205ENST00000394991 TRIM50Q86XT4 487 aa18.38■□□□□ 0.53
SNCA-205ENST00000394991 FIBCD1Q8N539 461 aa18.38■□□□□ 0.53
SNCA-205ENST00000394991 RILPL2Q969X0 211 aa18.38■□□□□ 0.53
SNCA-205ENST00000394991 IL17RAQ96F46 866 aa18.38■□□□□ 0.53
SNCA-205ENST00000394991 RC3H2Q9HBD1 1191 aaKnown RBP18.38■□□□□ 0.53
SNCA-205ENST00000394991 PCDHA1Q9Y5I3 950 aa18.38■□□□□ 0.53
SNCA-205ENST00000394991 ZDBF2Q9HCK1 2354 aa18.38■□□□□ 0.53
SNCA-205ENST00000394991 ZBTB5O15062 677 aa18.37■□□□□ 0.53
SNCA-205ENST00000394991 TBX10O75333 385 aa18.37■□□□□ 0.53
SNCA-205ENST00000394991 GTF2F1P35269 517 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNCA-205ENST00000394991 MFAP1P55081 439 aaKnown RBP18.37■□□□□ 0.53
SNCA-205ENST00000394991 ADAM17P78536 824 aa18.37■□□□□ 0.53
SNCA-205ENST00000394991 HERC4Q5GLZ8 1057 aaPredicted RBP18.37■□□□□ 0.53
SNCA-205ENST00000394991 FCHSD1Q86WN1 690 aa18.37■□□□□ 0.53
SNCA-205ENST00000394991 APBB2Q92870 758 aa18.37■□□□□ 0.53
SNCA-205ENST00000394991 UPF3BQ9BZI7 483 aaKnown RBP18.37■□□□□ 0.53
SNCA-205ENST00000394991 LMAN2LQ9H0V9 348 aa18.37■□□□□ 0.53
SNCA-205ENST00000394991 MAD2L2Q9UI95 211 aa18.37■□□□□ 0.53
SNCA-205ENST00000394991 SUPT16HQ9Y5B9 1047 aaKnown RBP18.37■□□□□ 0.53
SNCA-205ENST00000394991 KLRF2D3W0D1 207 aa18.36■□□□□ 0.53
SNCA-205ENST00000394991 LINC01565O15544 149 aa18.36■□□□□ 0.53
SNCA-205ENST00000394991 NCK2O43639 380 aa18.36■□□□□ 0.53
SNCA-205ENST00000394991 RB1P06400 928 aa18.36■□□□□ 0.53
SNCA-205ENST00000394991 BMPR1AP36894 532 aa18.36■□□□□ 0.53
SNCA-205ENST00000394991 MRPS9P82933 396 aaKnown RBP18.36■□□□□ 0.53
SNCA-205ENST00000394991 RNF135Q8IUD6 432 aa18.36■□□□□ 0.53
SNCA-205ENST00000394991 ADGRA3Q8IWK6 1321 aa18.36■□□□□ 0.53
SNCA-205ENST00000394991 SAMD3Q8N6K7 520 aa18.36■□□□□ 0.53
SNCA-205ENST00000394991 LMBR1Q8WVP7 490 aa18.36■□□□□ 0.53
SNCA-205ENST00000394991 PHOX2BQ99453 314 aa18.36■□□□□ 0.53
SNCA-205ENST00000394991 GPR20Q99678 358 aa18.36■□□□□ 0.53
SNCA-205ENST00000394991 C11orf84Q9BUA3 381 aaPredicted RBP18.36■□□□□ 0.53
SNCA-205ENST00000394991 PLXNA4Q9HCM2 1894 aa18.36■□□□□ 0.53
SNCA-205ENST00000394991 FRMPD4Q14CM0 1322 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms