RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 HHATQ5VTY9 493 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 GSTA5Q7RTV2 222 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 NLRP10Q86W26 655 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 CD302Q8IX05 232 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 DNAJC10Q8IXB1 793 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 TEX9Q8N6V9 391 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 MLXIPQ9HAP2 919 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 ATP8A1Q9Y2Q0 1164 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 HNRNPCL1O60812 293 aaKnown RBP9.38□□□□□ -0.91
GABRA1-202ENST00000393943 SHOX2O60902 331 aaPredicted RBP9.38□□□□□ -0.91
GABRA1-202ENST00000393943 AGTP01019 485 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 SETSIPP0DME0 302 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 SLC8A3P57103 927 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 CAV1Q03135 178 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 NTRK3Q16288 839 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 STAG2Q8N3U4 1231 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 MYCBPAPQ8TBZ2 947 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 SLC40A1Q9NP59 571 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 XRN1Q8IZH2 1706 aaKnown RBP9.38□□□□□ -0.91
GABRA1-202ENST00000393943 TRIM49BA6NDI0 452 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 KLRF2D3W0D1 207 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 GAP43P17677 238 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 IL6STP40189 918 aaPredicted RBP9.38□□□□□ -0.91
GABRA1-202ENST00000393943 SATB1Q01826 763 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 GUCY1A3Q02108 690 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 DDR1Q08345 913 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 SPDYCQ5MJ68 293 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 WDR78Q5VTH9 848 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 ALKBH5Q6P6C2 394 aaKnown RBP9.38□□□□□ -0.91
GABRA1-202ENST00000393943 GPBP1Q86WP2 473 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 SDR42E1Q8WUS8 393 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 SREK1Q8WXA9 508 aaKnown RBP9.38□□□□□ -0.91
GABRA1-202ENST00000393943 CDCA7Q9BWT1 371 aaPredicted RBP9.38□□□□□ -0.91
GABRA1-202ENST00000393943 VCX3AQ9NNX9 186 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 LCMT1Q9UIC8 334 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 NOC2LQ9Y3T9 749 aaKnown RBP9.38□□□□□ -0.91
GABRA1-202ENST00000393943 RASGRF1Q13972 1273 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 SLC18A3Q16572 532 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 SH3RF1Q7Z6J0 888 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 DHX37Q8IY37 1157 aaKnown RBP9.38□□□□□ -0.91
GABRA1-202ENST00000393943 ENAHQ8N8S7 591 aaPredicted RBP9.38□□□□□ -0.91
GABRA1-202ENST00000393943 GBP5Q96PP8 586 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 ORAI2Q96SN7 254 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 KDM4CQ9H3R0 1056 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 PCDHA12Q9UN75 941 aa9.38□□□□□ -0.91
GABRA1-202ENST00000393943 CSF1RP07333 972 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 SKIP12755 728 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 ITIH4Q14624 930 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 FAM83BQ5T0W9 1011 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 PPP1R2P3Q6NXS1 205 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 PI16Q6UXB8 463 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 MREGQ8N565 214 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 PRPF38AQ8NAV1 312 aaKnown RBP9.37□□□□□ -0.91
GABRA1-202ENST00000393943 MIPOL1Q8TD10 442 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 ATP6V0A4Q9HBG4 840 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 ANAPC4Q9UJX5 808 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 STK38LQ9Y2H1 464 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 DCTN3O75935 186 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 CCND1P24385 295 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 CDC25AP30304 524 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 MAGOHP61326 146 aaKnown RBP9.37□□□□□ -0.91
GABRA1-202ENST00000393943 TAF11Q15544 211 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 SPATA20Q8TB22 786 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 RIN2Q8WYP3 895 aaPredicted RBP9.37□□□□□ -0.91
GABRA1-202ENST00000393943 MAGOHBQ96A72 148 aaKnown RBP9.37□□□□□ -0.91
GABRA1-202ENST00000393943 SEC16BQ96JE7 1060 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 IWS1Q96ST2 819 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 INTS13Q9NVM9 706 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 SIGLEC1Q9BZZ2 1709 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 SLIT3O75094 1523 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 TMEM110-MUSTN1A8MSY1 372 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 STAMBPO95630 424 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 SYF2O95926 243 aaKnown RBP9.37□□□□□ -0.91
GABRA1-202ENST00000393943 RPSAP08865 295 aaKnown RBP9.37□□□□□ -0.91
GABRA1-202ENST00000393943 FECHP22830 423 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 ASPRV1Q53RT3 343 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 LIN9Q5TKA1 542 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 CCDC13Q8IYE1 715 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 CCDC110Q8TBZ0 833 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 INTUQ9ULD6 942 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 PLEKHA8P1O95397 391 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 RFX1P22670 979 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 AMPD2Q01433 879 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 MAP7Q14244 749 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 NAB2Q15742 525 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 CYB5D1Q6P9G0 228 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 FOXP4Q8IVH2 680 aaPredicted RBP9.37□□□□□ -0.91
GABRA1-202ENST00000393943 VPS52Q8N1B4 723 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 TRIM9Q9C026 710 aa9.37□□□□□ -0.91
GABRA1-202ENST00000393943 COBLO75128 1261 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 CHRNA3P32297 505 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 PBX1P40424 430 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 TOB1P50616 345 aaPredicted RBP9.36□□□□□ -0.91
GABRA1-202ENST00000393943 PPP1R18Q6NYC8 613 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 NELFCDQ8IXH7 590 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 GPKOWQ92917 476 aaPredicted RBP eCLIP9.36□□□□□ -0.91
GABRA1-202ENST00000393943 FAM81BQ96LP2 452 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 RNPC3Q96LT9 517 aaKnown RBP9.36□□□□□ -0.91
GABRA1-202ENST00000393943 USP40Q9NVE5 1235 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 SCOCQ9UIL1 159 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms