RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 TOB1P50616 345 aaPredicted RBP16.9■□□□□ 0.3
SUMO1-203ENST00000392246 ORC2Q13416 577 aaPredicted RBP16.9■□□□□ 0.3
SUMO1-203ENST00000392246 LRRC41Q15345 812 aa16.9■□□□□ 0.3
SUMO1-203ENST00000392246 FSCN1Q16658 493 aaKnown RBP16.9■□□□□ 0.3
SUMO1-203ENST00000392246 GNASQ5JWF2 1037 aa16.9■□□□□ 0.3
SUMO1-203ENST00000392246 TTC38Q5R3I4 469 aa16.9■□□□□ 0.3
SUMO1-203ENST00000392246 KLHDC9Q8NEP7 349 aa16.9■□□□□ 0.3
SUMO1-203ENST00000392246 SPATA33Q96N06 139 aa16.9■□□□□ 0.3
SUMO1-203ENST00000392246 TBC1D22BQ9NU19 505 aa16.9■□□□□ 0.3
SUMO1-203ENST00000392246 WNT7AO00755 349 aa16.89■□□□□ 0.29
SUMO1-203ENST00000392246 TBX3O15119 743 aa16.89■□□□□ 0.29
SUMO1-203ENST00000392246 CTAGE5O15320 804 aa16.89■□□□□ 0.29
SUMO1-203ENST00000392246 ZEB2O60315 1214 aa16.89■□□□□ 0.29
SUMO1-203ENST00000392246 SORBS3O60504 671 aa16.89■□□□□ 0.29
SUMO1-203ENST00000392246 ZSCAN22P10073 491 aaPredicted RBP16.89■□□□□ 0.29
SUMO1-203ENST00000392246 MCM7P33993 719 aa16.89■□□□□ 0.29
SUMO1-203ENST00000392246 RESTQ13127 1097 aa16.89■□□□□ 0.29
SUMO1-203ENST00000392246 ITGB3BPQ13352 177 aaPredicted RBP16.89■□□□□ 0.29
SUMO1-203ENST00000392246 ZNF174Q15697 407 aa16.89■□□□□ 0.29
SUMO1-203ENST00000392246 ANKLE1Q8NAG6 615 aa16.89■□□□□ 0.29
SUMO1-203ENST00000392246 PCSK9Q8NBP7 692 aaKnown RBP16.89■□□□□ 0.29
SUMO1-203ENST00000392246 PPTC7Q8NI37 304 aa16.89■□□□□ 0.29
SUMO1-203ENST00000392246 AFG1LQ8WV93 481 aa16.89■□□□□ 0.29
SUMO1-203ENST00000392246 FAM20AQ96MK3 541 aa16.89■□□□□ 0.29
SUMO1-203ENST00000392246 BCAS3Q9H6U6 928 aa16.89■□□□□ 0.29
SUMO1-203ENST00000392246 JPH1Q9HDC5 661 aaPredicted RBP16.89■□□□□ 0.29
SUMO1-203ENST00000392246 MYADML2A6NDP7 307 aa16.88■□□□□ 0.29
SUMO1-203ENST00000392246 A6NJR5 290 aa16.88■□□□□ 0.29
SUMO1-203ENST00000392246 KBTBD13C9JR72 458 aa16.88■□□□□ 0.29
SUMO1-203ENST00000392246 DNM1LO00429 736 aa16.88■□□□□ 0.29
SUMO1-203ENST00000392246 MARCH6O60337 910 aa16.88■□□□□ 0.29
SUMO1-203ENST00000392246 NEMFO60524 1076 aa16.88■□□□□ 0.29
SUMO1-203ENST00000392246 BAG4O95429 457 aaKnown RBP16.88■□□□□ 0.29
SUMO1-203ENST00000392246 EN2P19622 333 aaPredicted RBP16.88■□□□□ 0.29
SUMO1-203ENST00000392246 IRX5P78411 483 aaPredicted RBP16.88■□□□□ 0.29
SUMO1-203ENST00000392246 BEX3Q00994 111 aa16.88■□□□□ 0.29
SUMO1-203ENST00000392246 HSDL1Q3SXM5 330 aa16.88■□□□□ 0.29
SUMO1-203ENST00000392246 ETNPPLQ8TBG4 499 aa16.88■□□□□ 0.29
SUMO1-203ENST00000392246 SLC5A5Q92911 643 aa16.88■□□□□ 0.29
SUMO1-203ENST00000392246 UIMC1Q96RL1 719 aa16.88■□□□□ 0.29
SUMO1-203ENST00000392246 RIT2Q99578 217 aa16.88■□□□□ 0.29
SUMO1-203ENST00000392246 TSEN34Q9BSV6 310 aaKnown RBP16.88■□□□□ 0.29
SUMO1-203ENST00000392246 KCNMB3Q9NPA1 279 aa16.88■□□□□ 0.29
SUMO1-203ENST00000392246 SLC9A2Q9UBY0 812 aa16.88■□□□□ 0.29
SUMO1-203ENST00000392246 NOP56O00567 594 aaKnown RBP16.87■□□□□ 0.29
SUMO1-203ENST00000392246 DHX15O43143 795 aaKnown RBP16.87■□□□□ 0.29
SUMO1-203ENST00000392246 MMP3P08254 477 aa16.87■□□□□ 0.29
SUMO1-203ENST00000392246 PKP1Q13835 747 aa16.87■□□□□ 0.29
SUMO1-203ENST00000392246 KCNA10Q16322 511 aa16.87■□□□□ 0.29
SUMO1-203ENST00000392246 CALCRLQ16602 461 aa16.87■□□□□ 0.29
SUMO1-203ENST00000392246 LRCH2Q5VUJ6 765 aa16.87■□□□□ 0.29
SUMO1-203ENST00000392246 CCSAPQ6IQ19 270 aaPredicted RBP16.87■□□□□ 0.29
SUMO1-203ENST00000392246 SLFN12Q8IYM2 578 aa16.87■□□□□ 0.29
SUMO1-203ENST00000392246 PCDHB6Q9Y5E3 794 aa16.87■□□□□ 0.29
SUMO1-203ENST00000392246 MOXD2PA6NHM9 499 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 KPNA6O60684 536 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 GAS7O60861 476 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 PPFIA4O75335 1185 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 F13A1P00488 732 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 SOX10P56693 466 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 SP4Q02446 784 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 NBR1Q14596 966 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 DGKDQ16760 1214 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 HAS1Q92839 578 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 GPR20Q99678 358 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 TEKT3Q9BXF9 490 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 TCEAL9Q9UHQ7 104 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 DDX39AO00148 427 aaKnown RBP16.86■□□□□ 0.29
SUMO1-203ENST00000392246 PSMD10O75832 226 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 ASGR1P07306 291 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 MNX1P50219 401 aaPredicted RBP16.86■□□□□ 0.29
SUMO1-203ENST00000392246 KRT76Q01546 638 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 FOXD4L5Q5VV16 416 aaPredicted RBP16.86■□□□□ 0.29
SUMO1-203ENST00000392246 FOXD4L4Q8WXT5 416 aaPredicted RBP16.86■□□□□ 0.29
SUMO1-203ENST00000392246 SEPT1Q8WYJ6 367 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 GJA10Q969M2 543 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 MTMR9Q96QG7 549 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.86■□□□□ 0.29
SUMO1-203ENST00000392246 POLR3EQ9NVU0 708 aa16.86■□□□□ 0.29
SUMO1-203ENST00000392246 BRD1O95696 1058 aa16.85■□□□□ 0.29
SUMO1-203ENST00000392246 MYL3P08590 195 aa16.85■□□□□ 0.29
SUMO1-203ENST00000392246 HOXD8P13378 290 aaPredicted RBP16.85■□□□□ 0.29
SUMO1-203ENST00000392246 ACLYP53396 1101 aa16.85■□□□□ 0.29
SUMO1-203ENST00000392246 ZNF746Q6NUN9 644 aaPredicted RBP16.85■□□□□ 0.29
SUMO1-203ENST00000392246 TMEM60Q9H2L4 133 aa16.85■□□□□ 0.29
SUMO1-203ENST00000392246 PHF24Q9UPV7 400 aa16.85■□□□□ 0.29
SUMO1-203ENST00000392246 MYH15Q9Y2K3 1946 aa16.84■□□□□ 0.29
SUMO1-203ENST00000392246 ELP1O95163 1332 aa16.84■□□□□ 0.29
SUMO1-203ENST00000392246 LAD1O00515 517 aa16.84■□□□□ 0.29
SUMO1-203ENST00000392246 CABYRO75952 493 aa16.84■□□□□ 0.29
SUMO1-203ENST00000392246 OR52Z1P0C646 297 aa16.84■□□□□ 0.29
SUMO1-203ENST00000392246 DDIT3P35638 169 aa16.84■□□□□ 0.29
SUMO1-203ENST00000392246 ACTR2P61160 394 aa16.84■□□□□ 0.29
SUMO1-203ENST00000392246 NUCB2P80303 420 aa16.84■□□□□ 0.29
SUMO1-203ENST00000392246 PTGDRQ13258 359 aa16.84■□□□□ 0.29
SUMO1-203ENST00000392246 FAM173BQ6P4H8 233 aa16.84■□□□□ 0.29
SUMO1-203ENST00000392246 SMAP1Q8IYB5 467 aaPredicted RBP16.84■□□□□ 0.29
SUMO1-203ENST00000392246 C4orf32Q8N8J7 132 aa16.84■□□□□ 0.29
SUMO1-203ENST00000392246 PCDHA12Q9UN75 941 aa16.84■□□□□ 0.29
SUMO1-203ENST00000392246 TELO2Q9Y4R8 837 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms