RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 PMF1-BGLAPU3KQ54 211 aa3.56□□□□□ -1.84
RNU6-541P-201ENST00000384709 CCDC85CA6NKD9 419 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 B8ZZF3 427 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 KRIT1O00522 736 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 CKMP06732 381 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 CYP2C8P10632 490 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 SPIRE1Q08AE8 756 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 PAK1Q13153 545 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 ADAM9Q13443 819 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 TEPPQ6URK8 271 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 TTLL10Q6ZVT0 673 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 TRIM48Q8IWZ4 208 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 KYQ8NBH2 561 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 ARRDC4Q8NCT1 418 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 CLEC4DQ8WXI8 215 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 TOE1Q96GM8 510 aaKnown RBP3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 MRFAP1L1Q96HT8 127 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 SCLYQ96I15 445 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 CHAMP1Q96JM3 812 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 PWWP2AQ96N64 755 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 IPO9Q96P70 1041 aaKnown RBP3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 GORASP1Q9BQQ3 440 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 JAM3Q9BX67 310 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 IRF2BPLQ9H1B7 796 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 PIF1Q9H611 641 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 BCAS3Q9H6U6 928 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 SLC52A2Q9HAB3 445 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 NCOA5Q9HCD5 579 aaKnown RBP3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 TRIM39Q9HCM9 518 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 BTG4Q9NY30 223 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 MYOTQ9UBF9 498 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 WASF3Q9UPY6 502 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 TRAF6Q9Y4K3 522 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 NUB1Q9Y5A7 615 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 PCDHB4Q9Y5E5 795 aa3.55□□□□□ -1.84
RNU6-541P-201ENST00000384709 ZNF561-AS1K7EIQ3 104 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 NKRFO15226 690 aaKnown RBP eCLIP3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 TRIM13O60858 407 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 AMY2AP04746 511 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 FAHP16930 419 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 AMY2BP19961 511 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 THBS2P35442 1172 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 LIMS1P48059 325 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 ITGA1P56199 1179 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 GPR19Q15760 415 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 LIPIQ6XZB0 460 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 FAM26EQ8N5C1 309 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 TTLL6Q8N841 843 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 PIP4K2CQ8TBX8 421 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 SH3TC2Q8TF17 1288 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 FBXW5Q969U6 566 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 RNPC3Q96LT9 517 aaKnown RBP3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 ALG1Q9BT22 464 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 ZSWIM4Q9H7M6 989 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 KANSL2Q9H9L4 492 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 TELO2Q9Y4R8 837 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 PCDHA8Q9Y5H6 950 aa3.54□□□□□ -1.84
RNU6-541P-201ENST00000384709 ACOT7O00154 380 aa3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 CLASP2O75122 1294 aaKnown RBP3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 CRTAMO95727 393 aa3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 RPL13P26373 211 aaKnown RBP3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 MECP2P51608 486 aaKnown RBP3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 NKX3-2P78367 333 aa3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 BMS1Q14692 1282 aaKnown RBP3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 HHIPL2Q6UWX4 724 aa3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 KCTD1Q719H9 257 aa3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 OTOP1Q7RTM1 612 aa3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 ZC3H18Q86VM9 953 aaKnown RBP3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 NLGN4XQ8N0W4 816 aa3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 DDX11Q96FC9 970 aa3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 ORAI3Q9BRQ5 295 aa3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 CELF4Q9BZC1 486 aaKnown RBP3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 XYLT2Q9H1B5 865 aa3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 DSEQ9UL01 958 aa3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 CBLCQ9ULV8 474 aa3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 SRPK3Q9UPE1 567 aa3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 FAN1Q9Y2M0 1017 aa3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 PCDHA9Q9Y5H5 950 aa3.53□□□□□ -1.84
RNU6-541P-201ENST00000384709 TCRBV16S1A1N1A0A5B0 115 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 MAN2B1O00754 1011 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 SLC27A2O14975 620 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 GSTA4O15217 222 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 CHGBP05060 677 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 PYGMP11217 842 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 GNAT1P11488 350 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 COL6A2P12110 1019 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 SLURP1P55000 103 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 GUCY1A3Q02108 690 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 TUSC3Q13454 348 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 PAN2Q504Q3 1202 aaKnown RBP3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 FIGNQ5HY92 759 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 ZFYVE27Q5T4F4 411 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 OVCH1Q7RTY7 1134 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 BRAPQ7Z569 592 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 MTDHQ86UE4 582 aaKnown RBP3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 SP8Q8IXZ3 490 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 CARFQ8N187 725 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 DTX3Q8N9I9 347 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 ZNF526Q8TF50 670 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms