RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 RAD9AQ99638 391 aa30.46■■■□□ 2.47
NPHP3-202ENST00000383282 MYL10Q9BUA6 226 aa30.46■■■□□ 2.47
NPHP3-202ENST00000383282 RTEL1Q9NZ71 1219 aa30.46■■■□□ 2.47
NPHP3-202ENST00000383282 CCDC69A6NI79 296 aa30.45■■■□□ 2.47
NPHP3-202ENST00000383282 RSPH10B2B2RC85 870 aa30.45■■■□□ 2.47
NPHP3-202ENST00000383282 PRC1O43663 620 aa30.45■■■□□ 2.47
NPHP3-202ENST00000383282 GJB5O95377 273 aa30.45■■■□□ 2.47
NPHP3-202ENST00000383282 RSPH10BP0C881 870 aa30.45■■■□□ 2.47
NPHP3-202ENST00000383282 TMCO2Q7Z6W1 182 aaPredicted RBP30.45■■■□□ 2.47
NPHP3-202ENST00000383282 LCHNA4D1U4 455 aa30.44■■■□□ 2.46
NPHP3-202ENST00000383282 SPATA31C2B4DYI2 1134 aa30.44■■■□□ 2.46
NPHP3-202ENST00000383282 SMIM10L2AP0DMW4 78 aa30.44■■■□□ 2.46
NPHP3-202ENST00000383282 SMIM10L2BP0DMW5 78 aa30.44■■■□□ 2.46
NPHP3-202ENST00000383282 MCM5P33992 734 aa30.44■■■□□ 2.46
NPHP3-202ENST00000383282 GRB10Q13322 594 aa30.44■■■□□ 2.46
NPHP3-202ENST00000383282 HIC1Q14526 733 aa30.44■■■□□ 2.46
NPHP3-202ENST00000383282 XRRA1Q6P2D8 792 aa30.44■■■□□ 2.46
NPHP3-202ENST00000383282 CYFIP1Q7L576 1253 aa30.44■■■□□ 2.46
NPHP3-202ENST00000383282 TMEM87BQ96K49 555 aa30.44■■■□□ 2.46
NPHP3-202ENST00000383282 MUC3AQ02505 3323 aa30.44■■■□□ 2.46
NPHP3-202ENST00000383282 GNAT1P11488 350 aa30.43■■■□□ 2.46
NPHP3-202ENST00000383282 MBTPS1Q14703 1052 aa30.43■■■□□ 2.46
NPHP3-202ENST00000383282 TCTN1Q2MV58 587 aa30.43■■■□□ 2.46
NPHP3-202ENST00000383282 PCNX4Q63HM2 1172 aa30.43■■■□□ 2.46
NPHP3-202ENST00000383282 USP17L6PQ6QN14 398 aa30.43■■■□□ 2.46
NPHP3-202ENST00000383282 ZNF215Q9UL58 517 aaPredicted RBP30.43■■■□□ 2.46
NPHP3-202ENST00000383282 COG5Q9UP83 839 aa30.43■■■□□ 2.46
NPHP3-202ENST00000383282 PIK3CDO00329 1044 aa30.42■■■□□ 2.46
NPHP3-202ENST00000383282 CALM1P0DP23 149 aa30.42■■■□□ 2.46
NPHP3-202ENST00000383282 CALM2P0DP24 149 aa30.42■■■□□ 2.46
NPHP3-202ENST00000383282 CALM3P0DP25 149 aa30.42■■■□□ 2.46
NPHP3-202ENST00000383282 KRT40Q6A162 431 aa30.42■■■□□ 2.46
NPHP3-202ENST00000383282 NLRX1Q86UT6 975 aa30.42■■■□□ 2.46
NPHP3-202ENST00000383282 GPR20Q99678 358 aa30.42■■■□□ 2.46
NPHP3-202ENST00000383282 BCAS3Q9H6U6 928 aa30.42■■■□□ 2.46
NPHP3-202ENST00000383282 CAND2O75155 1236 aa30.41■■■□□ 2.46
NPHP3-202ENST00000383282 AMHP03971 560 aa30.41■■■□□ 2.46
NPHP3-202ENST00000383282 HOXC8P31273 242 aa30.41■■■□□ 2.46
NPHP3-202ENST00000383282 TFF2Q03403 129 aa30.41■■■□□ 2.46
NPHP3-202ENST00000383282 SEMA3FQ13275 785 aa30.41■■■□□ 2.46
NPHP3-202ENST00000383282 DBF4BQ8NFT6 615 aa30.41■■■□□ 2.46
NPHP3-202ENST00000383282 TGS1Q96RS0 853 aaKnown RBP30.41■■■□□ 2.46
NPHP3-202ENST00000383282 SENP7Q9BQF6 1050 aa30.41■■■□□ 2.46
NPHP3-202ENST00000383282 RNPEPQ9H4A4 650 aa30.41■■■□□ 2.46
NPHP3-202ENST00000383282 SH2B2O14492 632 aaPredicted RBP30.4■■■□□ 2.46
NPHP3-202ENST00000383282 MEIS2O14770 477 aa30.4■■■□□ 2.46
NPHP3-202ENST00000383282 TREHO43280 583 aa30.4■■■□□ 2.46
NPHP3-202ENST00000383282 FAM117BQ6P1L5 589 aa30.4■■■□□ 2.46
NPHP3-202ENST00000383282 GIMAP8Q8ND71 665 aaPredicted RBP30.4■■■□□ 2.46
NPHP3-202ENST00000383282 LMCD1Q9NZU5 365 aa30.4■■■□□ 2.46
NPHP3-202ENST00000383282 PRRC2BQ5JSZ5 2229 aaKnown RBP30.4■■■□□ 2.46
NPHP3-202ENST00000383282 PLEKHA8P1O95397 391 aa30.39■■■□□ 2.46
NPHP3-202ENST00000383282 SPRED2Q7Z698 418 aa30.39■■■□□ 2.46
NPHP3-202ENST00000383282 LSG1Q9H089 658 aaKnown RBP30.39■■■□□ 2.46
NPHP3-202ENST00000383282 INSL6Q9Y581 213 aa30.39■■■□□ 2.46
NPHP3-202ENST00000383282 LPXNO60711 386 aa30.38■■■□□ 2.45
NPHP3-202ENST00000383282 BMP1P13497 986 aa30.38■■■□□ 2.45
NPHP3-202ENST00000383282 LIFRP42702 1097 aa30.38■■■□□ 2.45
NPHP3-202ENST00000383282 SP4Q02446 784 aa30.38■■■□□ 2.45
NPHP3-202ENST00000383282 UTP14CQ5TAP6 766 aaKnown RBP30.38■■■□□ 2.45
NPHP3-202ENST00000383282 MYOCDQ8IZQ8 938 aa30.38■■■□□ 2.45
NPHP3-202ENST00000383282 SRBD1Q8N5C6 995 aaKnown RBP30.38■■■□□ 2.45
NPHP3-202ENST00000383282 GDPD5Q8WTR4 605 aa30.38■■■□□ 2.45
NPHP3-202ENST00000383282 CDHR1Q96JP9 859 aa30.38■■■□□ 2.45
NPHP3-202ENST00000383282 PSTPIP2Q9H939 334 aa30.38■■■□□ 2.45
NPHP3-202ENST00000383282 MTUS1Q9ULD2 1270 aa30.38■■■□□ 2.45
NPHP3-202ENST00000383282 SLC12A7Q9Y666 1083 aa30.38■■■□□ 2.45
NPHP3-202ENST00000383282 LINC01553A4QN01 128 aa30.37■■■□□ 2.45
NPHP3-202ENST00000383282 SLC27A2O14975 620 aa30.37■■■□□ 2.45
NPHP3-202ENST00000383282 ERVK-21P61565 698 aa30.37■■■□□ 2.45
NPHP3-202ENST00000383282 PLEKHG4Q58EX7 1191 aa30.37■■■□□ 2.45
NPHP3-202ENST00000383282 LIN28BQ6ZN17 250 aaKnown RBP eCLIP30.37■■■□□ 2.45
NPHP3-202ENST00000383282 SEPT8Q92599 483 aa30.37■■■□□ 2.45
NPHP3-202ENST00000383282 HLA-CQ95604 372 aa30.37■■■□□ 2.45
NPHP3-202ENST00000383282 ESYT1Q9BSJ8 1104 aa30.37■■■□□ 2.45
NPHP3-202ENST00000383282 SETD4Q9NVD3 440 aa30.37■■■□□ 2.45
NPHP3-202ENST00000383282 PTPRSQ13332 1948 aa30.37■■■□□ 2.45
NPHP3-202ENST00000383282 CTSHP09668 335 aa30.36■■■□□ 2.45
NPHP3-202ENST00000383282 RXRAP19793 462 aa30.36■■■□□ 2.45
NPHP3-202ENST00000383282 KCNQ1P51787 676 aa30.36■■■□□ 2.45
NPHP3-202ENST00000383282 TRIM50Q86XT4 487 aa30.36■■■□□ 2.45
NPHP3-202ENST00000383282 GPRASP2Q96D09 838 aa30.36■■■□□ 2.45
NPHP3-202ENST00000383282 CREB3L3Q68CJ9 461 aa30.35■■■□□ 2.45
NPHP3-202ENST00000383282 CMTR1Q8N1G2 835 aaKnown RBP30.35■■■□□ 2.45
NPHP3-202ENST00000383282 ANO2Q9NQ90 1003 aa30.35■■■□□ 2.45
NPHP3-202ENST00000383282 XIRP2A4UGR9 3374 aa30.35■■■□□ 2.45
NPHP3-202ENST00000383282 ARHGAP4P98171 946 aa30.34■■■□□ 2.45
NPHP3-202ENST00000383282 SUGCTQ9HAC7 445 aa30.34■■■□□ 2.45
NPHP3-202ENST00000383282 TRANK1O15050 2925 aa30.34■■■□□ 2.45
NPHP3-202ENST00000383282 NRCAMQ92823 1304 aa30.33■■■□□ 2.45
NPHP3-202ENST00000383282 SPDYE3A6NKU9 549 aa30.33■■■□□ 2.45
NPHP3-202ENST00000383282 SYNE3Q6ZMZ3 975 aa30.33■■■□□ 2.45
NPHP3-202ENST00000383282 TCF7P36402 384 aaPredicted RBP30.32■■■□□ 2.44
NPHP3-202ENST00000383282 MKRN4PQ13434 485 aaPredicted RBP30.32■■■□□ 2.44
NPHP3-202ENST00000383282 NECTIN1Q15223 517 aa30.32■■■□□ 2.44
NPHP3-202ENST00000383282 CCDC82Q8N4S0 544 aa30.32■■■□□ 2.44
NPHP3-202ENST00000383282 FANCBQ8NB91 859 aa30.32■■■□□ 2.44
NPHP3-202ENST00000383282 APBB2Q92870 758 aa30.32■■■□□ 2.44
NPHP3-202ENST00000383282 NECAB3Q96P71 396 aaPredicted RBP30.32■■■□□ 2.44
NPHP3-202ENST00000383282 HTRA4P83105 476 aaPredicted RBP30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms