RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 USP26Q9BXU7 913 aa18.52■□□□□ 0.56
VCX3A-201ENST00000381089 MICAL3Q7RTP6 2002 aa18.52■□□□□ 0.55
VCX3A-201ENST00000381089 PPP1R11O60927 126 aaPredicted RBP18.51■□□□□ 0.55
VCX3A-201ENST00000381089 LGALS2P05162 132 aa18.51■□□□□ 0.55
VCX3A-201ENST00000381089 SMIM10L2AP0DMW4 78 aa18.51■□□□□ 0.55
VCX3A-201ENST00000381089 SMIM10L2BP0DMW5 78 aa18.51■□□□□ 0.55
VCX3A-201ENST00000381089 SSTR3P32745 418 aaPredicted RBP18.51■□□□□ 0.55
VCX3A-201ENST00000381089 SP2Q02086 613 aa18.51■□□□□ 0.55
VCX3A-201ENST00000381089 SART3Q15020 963 aaKnown RBP18.51■□□□□ 0.55
VCX3A-201ENST00000381089 SEC23AQ15436 765 aa18.51■□□□□ 0.55
VCX3A-201ENST00000381089 IL31RAQ8NI17 732 aa18.51■□□□□ 0.55
VCX3A-201ENST00000381089 SP7Q8TDD2 431 aaPredicted RBP18.51■□□□□ 0.55
VCX3A-201ENST00000381089 APBB2Q92870 758 aa18.51■□□□□ 0.55
VCX3A-201ENST00000381089 ZNF215Q9UL58 517 aaPredicted RBP18.51■□□□□ 0.55
VCX3A-201ENST00000381089 PNMA6FA0A0J9YX94 578 aa18.5■□□□□ 0.55
VCX3A-201ENST00000381089 PI4K2BG5E9Z4 385 aa18.5■□□□□ 0.55
VCX3A-201ENST00000381089 HIC1Q14526 733 aa18.5■□□□□ 0.55
VCX3A-201ENST00000381089 GRM4Q14833 912 aa18.5■□□□□ 0.55
VCX3A-201ENST00000381089 EPC2Q52LR7 807 aa18.5■□□□□ 0.55
VCX3A-201ENST00000381089 PTCRAQ6ISU1 281 aaPredicted RBP18.5■□□□□ 0.55
VCX3A-201ENST00000381089 GJD3Q8N144 294 aa18.5■□□□□ 0.55
VCX3A-201ENST00000381089 PIGSQ96S52 555 aa18.5■□□□□ 0.55
VCX3A-201ENST00000381089 RIOX1Q9H6W3 641 aa18.5■□□□□ 0.55
VCX3A-201ENST00000381089 FAM50BQ9Y247 325 aa18.5■□□□□ 0.55
VCX3A-201ENST00000381089 IFIT3O14879 490 aaKnown RBP18.49■□□□□ 0.55
VCX3A-201ENST00000381089 TREHO43280 583 aa18.49■□□□□ 0.55
VCX3A-201ENST00000381089 CTSHP09668 335 aa18.49■□□□□ 0.55
VCX3A-201ENST00000381089 HOXC8P31273 242 aa18.49■□□□□ 0.55
VCX3A-201ENST00000381089 MKRN4PQ13434 485 aaPredicted RBP18.49■□□□□ 0.55
VCX3A-201ENST00000381089 METTL7BQ6UX53 244 aa18.49■□□□□ 0.55
VCX3A-201ENST00000381089 RALYLQ86SE5 291 aaKnown RBP18.49■□□□□ 0.55
VCX3A-201ENST00000381089 FAM178BQ8IXR5 827 aa18.49■□□□□ 0.55
VCX3A-201ENST00000381089 TOP1MTQ969P6 601 aa18.49■□□□□ 0.55
VCX3A-201ENST00000381089 RNPEPQ9H4A4 650 aa18.49■□□□□ 0.55
VCX3A-201ENST00000381089 U3KPZ7 1027 aaPredicted RBP18.49■□□□□ 0.55
VCX3A-201ENST00000381089 FIBPO43427 364 aa18.48■□□□□ 0.55
VCX3A-201ENST00000381089 UPP2O95045 317 aa18.48■□□□□ 0.55
VCX3A-201ENST00000381089 ALADP13716 330 aa18.48■□□□□ 0.55
VCX3A-201ENST00000381089 HOXD11P31277 338 aaPredicted RBP18.48■□□□□ 0.55
VCX3A-201ENST00000381089 ICAM3P32942 547 aa18.48■□□□□ 0.55
VCX3A-201ENST00000381089 GPM6BQ13491 265 aa18.48■□□□□ 0.55
VCX3A-201ENST00000381089 CYB5R4Q7L1T6 521 aa18.48■□□□□ 0.55
VCX3A-201ENST00000381089 BANK1Q8NDB2 785 aa18.48■□□□□ 0.55
VCX3A-201ENST00000381089 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.48■□□□□ 0.55
VCX3A-201ENST00000381089 GPKOWQ92917 476 aaPredicted RBP eCLIP18.48■□□□□ 0.55
VCX3A-201ENST00000381089 IFIH1Q9BYX4 1025 aaKnown RBP18.48■□□□□ 0.55
VCX3A-201ENST00000381089 FAM86C2PA6NEL3 165 aa18.47■□□□□ 0.55
VCX3A-201ENST00000381089 H3BNC9 293 aa18.47■□□□□ 0.55
VCX3A-201ENST00000381089 WTAPQ15007 396 aa18.47■□□□□ 0.55
VCX3A-201ENST00000381089 CYFIP1Q7L576 1253 aa18.47■□□□□ 0.55
VCX3A-201ENST00000381089 CATIPQ7Z7H3 387 aa18.47■□□□□ 0.55
VCX3A-201ENST00000381089 TMEM192Q8IY95 271 aa18.47■□□□□ 0.55
VCX3A-201ENST00000381089 RUFY2Q8WXA3 655 aa18.47■□□□□ 0.55
VCX3A-201ENST00000381089 KHSRPQ92945 711 aaKnown RBP eCLIP18.47■□□□□ 0.55
VCX3A-201ENST00000381089 CUL5Q93034 780 aa18.47■□□□□ 0.55
VCX3A-201ENST00000381089 ZFP91Q96JP5 570 aaPredicted RBP18.47■□□□□ 0.55
VCX3A-201ENST00000381089 INPP4AQ96PE3 977 aaPredicted RBP18.47■□□□□ 0.55
VCX3A-201ENST00000381089 GRXCR2A6NFK2 248 aa18.46■□□□□ 0.55
VCX3A-201ENST00000381089 PRR33A8MZF0 331 aa18.46■□□□□ 0.55
VCX3A-201ENST00000381089 SPATA31C2B4DYI2 1134 aa18.46■□□□□ 0.55
VCX3A-201ENST00000381089 NCK2O43639 380 aa18.46■□□□□ 0.55
VCX3A-201ENST00000381089 EP400NLQ6ZTU2 488 aa18.46■□□□□ 0.55
VCX3A-201ENST00000381089 GIMAP8Q8ND71 665 aaPredicted RBP18.46■□□□□ 0.55
VCX3A-201ENST00000381089 SMARCC2Q8TAQ2 1214 aa18.46■□□□□ 0.55
VCX3A-201ENST00000381089 GPR20Q99678 358 aa18.46■□□□□ 0.55
VCX3A-201ENST00000381089 NSUN3Q9H649 340 aaKnown RBP18.46■□□□□ 0.55
VCX3A-201ENST00000381089 CD320Q9NPF0 282 aa18.46■□□□□ 0.55
VCX3A-201ENST00000381089 C11orf16Q9NQ32 467 aa18.46■□□□□ 0.55
VCX3A-201ENST00000381089 SETD4Q9NVD3 440 aa18.46■□□□□ 0.55
VCX3A-201ENST00000381089 RWDD3Q9Y3V2 267 aa18.46■□□□□ 0.55
VCX3A-201ENST00000381089 FRMPD4Q14CM0 1322 aa18.46■□□□□ 0.55
VCX3A-201ENST00000381089 COL4A6Q14031 1691 aa18.45■□□□□ 0.54
VCX3A-201ENST00000381089 IGHDP01880 384 aa18.45■□□□□ 0.54
VCX3A-201ENST00000381089 IL9P15248 144 aa18.45■□□□□ 0.54
VCX3A-201ENST00000381089 MRPS9P82933 396 aaKnown RBP18.45■□□□□ 0.54
VCX3A-201ENST00000381089 ARHGAP4P98171 946 aa18.45■□□□□ 0.54
VCX3A-201ENST00000381089 CSPP1Q1MSJ5 1256 aa18.45■□□□□ 0.54
VCX3A-201ENST00000381089 UTP14CQ5TAP6 766 aaKnown RBP18.45■□□□□ 0.54
VCX3A-201ENST00000381089 XRRA1Q6P2D8 792 aa18.45■□□□□ 0.54
VCX3A-201ENST00000381089 NLRX1Q86UT6 975 aa18.45■□□□□ 0.54
VCX3A-201ENST00000381089 NCOA7Q8NI08 942 aa18.45■□□□□ 0.54
VCX3A-201ENST00000381089 NEK9Q8TD19 979 aa18.45■□□□□ 0.54
VCX3A-201ENST00000381089 PABPC5Q96DU9 382 aaKnown RBP18.45■□□□□ 0.54
VCX3A-201ENST00000381089 IL17RAQ96F46 866 aa18.45■□□□□ 0.54
VCX3A-201ENST00000381089 SENP7Q9BQF6 1050 aa18.45■□□□□ 0.54
VCX3A-201ENST00000381089 RTEL1Q9NZ71 1219 aa18.45■□□□□ 0.54
VCX3A-201ENST00000381089 BAZ2BQ9UIF8 2168 aaKnown RBP18.45■□□□□ 0.54
VCX3A-201ENST00000381089 NRCAMQ92823 1304 aa18.45■□□□□ 0.54
VCX3A-201ENST00000381089 H3BQ06 376 aaPredicted RBP18.44■□□□□ 0.54
VCX3A-201ENST00000381089 TAF2Q6P1X5 1199 aa18.44■□□□□ 0.54
VCX3A-201ENST00000381089 RSPH3Q86UC2 560 aa18.44■□□□□ 0.54
VCX3A-201ENST00000381089 FIBCD1Q8N539 461 aa18.44■□□□□ 0.54
VCX3A-201ENST00000381089 SEC63Q9UGP8 760 aaKnown RBP18.44■□□□□ 0.54
VCX3A-201ENST00000381089 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.43■□□□□ 0.54
VCX3A-201ENST00000381089 CYTH3O43739 400 aa18.43■□□□□ 0.54
VCX3A-201ENST00000381089 KIF5BP33176 963 aa18.43■□□□□ 0.54
VCX3A-201ENST00000381089 CTNNB1P35222 781 aa18.43■□□□□ 0.54
VCX3A-201ENST00000381089 SP4Q02446 784 aa18.43■□□□□ 0.54
VCX3A-201ENST00000381089 TROAPQ12815 778 aa18.43■□□□□ 0.54
VCX3A-201ENST00000381089 TCEAL5Q5H9L2 206 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms