RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 FBXL5Q9UKA1 691 aa9.26□□□□□ -0.93
NHLRC3-201ENST00000379599 USP15Q9Y4E8 981 aaPredicted RBP9.26□□□□□ -0.93
NHLRC3-201ENST00000379599 CAPN6Q9Y6Q1 641 aa9.26□□□□□ -0.93
NHLRC3-201ENST00000379599 ABCA8O94911 1581 aa9.26□□□□□ -0.93
NHLRC3-201ENST00000379599 NPHP3-ACAD11A0A0J9YXS1 232 aa9.26□□□□□ -0.93
NHLRC3-201ENST00000379599 TAF5LO75529 589 aa9.26□□□□□ -0.93
NHLRC3-201ENST00000379599 SH3BGRP55822 239 aaPredicted RBP9.26□□□□□ -0.93
NHLRC3-201ENST00000379599 PLS1Q14651 629 aa9.26□□□□□ -0.93
NHLRC3-201ENST00000379599 KLC3Q6P597 504 aa9.26□□□□□ -0.93
NHLRC3-201ENST00000379599 DHX32Q7L7V1 743 aaKnown RBP9.26□□□□□ -0.93
NHLRC3-201ENST00000379599 DDX42Q86XP3 938 aaKnown RBP eCLIP9.26□□□□□ -0.93
NHLRC3-201ENST00000379599 ANKRD13CQ8N6S4 541 aa9.26□□□□□ -0.93
NHLRC3-201ENST00000379599 CEP70Q8NHQ1 597 aa9.26□□□□□ -0.93
NHLRC3-201ENST00000379599 ZNF333Q96JL9 665 aa9.26□□□□□ -0.93
NHLRC3-201ENST00000379599 PCMTD1Q96MG8 357 aaPredicted RBP9.26□□□□□ -0.93
NHLRC3-201ENST00000379599 CCDC8Q9H0W5 538 aaPredicted RBP9.26□□□□□ -0.93
NHLRC3-201ENST00000379599 METTL5Q9NRN9 209 aaKnown RBP9.26□□□□□ -0.93
NHLRC3-201ENST00000379599 ATP8A2Q9NTI2 1148 aa9.26□□□□□ -0.93
NHLRC3-201ENST00000379599 SPTLC1O15269 473 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 CYP21A2P08686 494 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 PDIA3P30101 505 aaKnown RBP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 STIP1P31948 543 aaKnown RBP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 CD97P48960 835 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 NEK2P51955 445 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 TTF1Q15361 905 aaPredicted RBP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 LIN52Q52LA3 116 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 LMBRD2Q68DH5 695 aaPredicted RBP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 SLC2A7Q6PXP3 512 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 GPIHBP1Q8IV16 184 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 RIBC1Q8N443 379 aaPredicted RBP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 SREK1Q8WXA9 508 aaKnown RBP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 ATP6V0A1Q93050 837 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 PPP2R3CQ969Q6 453 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 AZIN2Q96A70 460 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 DHTKD1Q96HY7 919 aaPredicted RBP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 TRPV5Q9NQA5 729 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 STOML1Q9UBI4 398 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 CEMIPQ8WUJ3 1361 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 SETD1AO15047 1707 aaKnown RBP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 EFCAB6Q5THR3 1501 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 DUOX2Q9NRD8 1548 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 CHL1O00533 1208 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 ACTN4O43707 911 aaKnown RBP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 ENTPD5O75356 428 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 POTEJP0CG39 1038 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 VHLP40337 213 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 COPB1P53618 953 aaKnown RBP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 RTP1P59025 263 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 ARPC4P59998 168 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 CMPK2Q5EBM0 449 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 C6orf183Q5T699 404 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 SAMD3Q8N6K7 520 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 PPFIBP2Q8ND30 876 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 SCG3Q8WXD2 468 aaKnown RBP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 DDX12PQ92771 950 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 IQCDQ96DY2 449 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 POLR3CQ9BUI4 534 aaPredicted RBP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 CTNND2Q9UQB3 1225 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 TMA7Q9Y2S6 64 aaKnown RBP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 INO80Q9ULG1 1556 aaPredicted RBP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 CCDC160A6NGH7 325 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 SART1O43290 800 aaKnown RBP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 IARSP41252 1262 aaKnown RBP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 TRIM29Q14134 588 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 UAP1Q16222 522 aaPredicted RBP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 ZNF394Q53GI3 561 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 SH3D19Q5HYK7 790 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 SNX30Q5VWJ9 437 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 POTEEQ6S8J3 1075 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 CAPN12Q6ZSI9 719 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 KRT26Q7Z3Y9 468 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 VSIG1Q86XK7 387 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 KLHDC4Q8TBB5 520 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 MGARPQ8TDB4 240 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 PPP1R14BQ96C90 147 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 DRC3Q9H069 523 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 PAG1Q9NWQ8 432 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 BTBD7Q9P203 1132 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 FBXO9Q9UK97 447 aaPredicted RBP9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 ITGB1BP2Q9UKP3 347 aa9.25□□□□□ -0.93
NHLRC3-201ENST00000379599 AGLP35573 1532 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 SYCP2Q9BX26 1530 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 A0A0G2JS52 829 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 SNX3O60493 162 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 ZFYP08048 801 aaPredicted RBP9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 GSTT2P0CG29 244 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 GSTT2BP0CG30 244 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 VAV1P15498 845 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 CASP1P29466 404 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 MDM2Q00987 491 aaPredicted RBP9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 KIF23Q02241 960 aaPredicted RBP9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 SULT2A1Q06520 285 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 SEPT7Q16181 437 aaKnown RBP9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 ZNF362Q5T0B9 420 aaPredicted RBP9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 SYDE2Q5VT97 1194 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 FAAH2Q6GMR7 532 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 TRIM67Q6ZTA4 783 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 STKLD1Q8NE28 680 aa9.24□□□□□ -0.93
NHLRC3-201ENST00000379599 SPATA17Q96L03 361 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms