RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 ASB14A6NK59 587 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 TXNDC9O14530 226 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 GOLGA8FQ08AF8 430 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 GOLGA8DPQ0D2H9 430 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 ASIC2Q16515 512 aa11.78□□□□□ -0.52
HIF3A-205ENST00000377670 TWF2Q6IBS0 349 aaKnown RBP11.78□□□□□ -0.52
HIF3A-205ENST00000377670 DLC1Q96QB1 1528 aa11.77□□□□□ -0.52
HIF3A-205ENST00000377670 CASQ2O14958 399 aaPredicted RBP11.77□□□□□ -0.52
HIF3A-205ENST00000377670 HNRNPDLO14979 420 aaKnown RBP11.77□□□□□ -0.52
HIF3A-205ENST00000377670 CACNB1Q02641 598 aaPredicted RBP11.77□□□□□ -0.52
HIF3A-205ENST00000377670 KRT81Q14533 505 aa11.77□□□□□ -0.52
HIF3A-205ENST00000377670 ANGEL2Q5VTE6 544 aaKnown RBP11.77□□□□□ -0.52
HIF3A-205ENST00000377670 SKA2Q8WVK7 121 aaPredicted RBP11.77□□□□□ -0.52
HIF3A-205ENST00000377670 TAF6LQ9Y6J9 622 aa11.77□□□□□ -0.52
HIF3A-205ENST00000377670 USP17L15C9J2P7 530 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 USP17L13C9JLJ4 530 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 USP17L11C9JVI0 530 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 USP17L18D6R9N7 530 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 USP17L22D6RA61 530 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 USP17L17D6RBQ6 530 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 USP17L19D6RCP7 530 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 USP17L20D6RJB6 530 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 GUCY2FP51841 1108 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 USP17L24Q0WX57 530 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 GALNT17Q6IS24 598 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 MLKLQ8NB16 471 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 MGARPQ8TDB4 240 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 WDR11Q9BZH6 1224 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 PYCARDQ9ULZ3 195 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 ATP1A2P50993 1020 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 IRX5P78411 483 aaPredicted RBP11.77□□□□□ -0.53
HIF3A-205ENST00000377670 GPSM2P81274 684 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 CC2D1AQ6P1N0 951 aaPredicted RBP11.77□□□□□ -0.53
HIF3A-205ENST00000377670 CCDC62Q6P9F0 684 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 FAM207AQ9NSI2 230 aaPredicted RBP11.77□□□□□ -0.53
HIF3A-205ENST00000377670 AGLP35573 1532 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 PEX19P40855 299 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 KIF23Q02241 960 aaPredicted RBP11.77□□□□□ -0.53
HIF3A-205ENST00000377670 PDE1CQ14123 709 aaPredicted RBP11.77□□□□□ -0.53
HIF3A-205ENST00000377670 DESI2Q9BSY9 194 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 SLC39A2Q9NP94 309 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 DISC1Q9NRI5 854 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 FANCLQ9NW38 375 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 PCDHB6Q9Y5E3 794 aa11.77□□□□□ -0.53
HIF3A-205ENST00000377670 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.76□□□□□ -0.53
HIF3A-205ENST00000377670 NFKBIAP25963 317 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 UBE2SQ16763 222 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 RPAINQ86UA6 219 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.76□□□□□ -0.53
HIF3A-205ENST00000377670 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.76□□□□□ -0.53
HIF3A-205ENST00000377670 MOSPD1Q9UJG1 213 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 SCAF8Q9UPN6 1271 aaKnown RBP11.76□□□□□ -0.53
HIF3A-205ENST00000377670 RFC1P35251 1148 aaPredicted RBP11.76□□□□□ -0.53
HIF3A-205ENST00000377670 CAPS2Q9BXY5 557 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 CD209Q9NNX6 404 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 NLRC4Q9NPP4 1024 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 FEM1BQ9UK73 627 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 NR2E3Q9Y5X4 410 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 MAP2P11137 1827 aaKnown RBP11.76□□□□□ -0.53
HIF3A-205ENST00000377670 PLEKHG2Q9H7P9 1386 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 SPATA31A1Q5TZJ5 1347 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 BNIP3LO60238 219 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 PPFIA4O75335 1185 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 GMPSP49915 693 aaPredicted RBP11.76□□□□□ -0.53
HIF3A-205ENST00000377670 CLUL1Q15846 466 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 CFAP221Q4G0U5 840 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 NLRP4Q96MN2 994 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 RAVER2Q9HCJ3 691 aaKnown RBP11.76□□□□□ -0.53
HIF3A-205ENST00000377670 NRXN1Q9ULB1 1477 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 ZNF233A6NK53 670 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 EFCAB8A8MWE9 144 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 GMNNO75496 209 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 ZWINTO95229 277 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 CDK8P49336 464 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 LRRC8AQ8IWT6 810 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 RNF139Q8WU17 664 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 PCDHA5Q9Y5H7 936 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 ZNF18P17022 549 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 CMA1P23946 247 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 PIK3CAP42336 1068 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 MYO1EQ12965 1108 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 KRT71Q3SY84 523 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 BCAS4Q8TDM0 211 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 GTF3C2Q8WUA4 911 aaPredicted RBP11.76□□□□□ -0.53
HIF3A-205ENST00000377670 NUP58Q9BVL2 599 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 NRBP1Q9UHY1 535 aa11.76□□□□□ -0.53
HIF3A-205ENST00000377670 STAM2O75886 525 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 RARBP10826 455 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 PTPROQ16827 1216 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 MUM1Q2TAK8 710 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 TMCO4Q5TGY1 634 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 TTC19Q6DKK2 380 aaPredicted RBP11.75□□□□□ -0.53
HIF3A-205ENST00000377670 FAM84BQ96KN1 310 aaPredicted RBP11.75□□□□□ -0.53
HIF3A-205ENST00000377670 GBP5Q96PP8 586 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 PDE11AQ9HCR9 933 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 KMT5AQ9NQR1 393 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 DDX41Q9UJV9 622 aaKnown RBP11.75□□□□□ -0.53
HIF3A-205ENST00000377670 COL4A3BPQ9Y5P4 624 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 WDR64B1ANS9 1081 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 GTPBP6O43824 516 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms