RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 OSBPL9Q96SU4 736 aa17.96■□□□□ 0.47
TRIM27-202ENST00000377199 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.96■□□□□ 0.478e-6■■□□□ 13.6
TRIM27-202ENST00000377199 SNHG28P0DPA3 235 aa17.95■□□□□ 0.46
TRIM27-202ENST00000377199 EEF2P13639 858 aaKnown RBP17.95■□□□□ 0.46
TRIM27-202ENST00000377199 GGCXP38435 758 aa17.95■□□□□ 0.46
TRIM27-202ENST00000377199 MAP9Q49MG5 647 aa17.95■□□□□ 0.46
TRIM27-202ENST00000377199 TMEM119Q4V9L6 283 aa17.95■□□□□ 0.46
TRIM27-202ENST00000377199 FIGNQ5HY92 759 aa17.95■□□□□ 0.46
TRIM27-202ENST00000377199 FOXR1Q6PIV2 292 aa17.95■□□□□ 0.46
TRIM27-202ENST00000377199 FNBP4Q8N3X1 1017 aaPredicted RBP17.95■□□□□ 0.46
TRIM27-202ENST00000377199 GOLGA6L1Q8N7Z2 621 aa17.95■□□□□ 0.46
TRIM27-202ENST00000377199 FAM133AQ8N9E0 248 aa17.95■□□□□ 0.46
TRIM27-202ENST00000377199 GJD4Q96KN9 370 aaPredicted RBP17.95■□□□□ 0.46
TRIM27-202ENST00000377199 BCAS3Q9H6U6 928 aa17.95■□□□□ 0.46
TRIM27-202ENST00000377199 PSMC6P62333 389 aa17.95■□□□□ 0.46
TRIM27-202ENST00000377199 FAM83BQ5T0W9 1011 aa17.95■□□□□ 0.46
TRIM27-202ENST00000377199 SND1Q7KZF4 910 aaKnown RBP eCLIP17.95■□□□□ 0.46
TRIM27-202ENST00000377199 HPCAL4Q9UM19 191 aa17.95■□□□□ 0.46
TRIM27-202ENST00000377199 ANKRD65E5RJM6 399 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 MED24O75448 989 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 ACTN1P12814 892 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 HOXA13P31271 388 aaPredicted RBP17.94■□□□□ 0.46
TRIM27-202ENST00000377199 MAPK8IP2Q13387 824 aaPredicted RBP17.94■□□□□ 0.46
TRIM27-202ENST00000377199 CCDC70Q6NSX1 233 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 PDXDC1Q6P996 788 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 SPICE1Q8N0Z3 855 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 TBC1D5Q92609 795 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 PODXL2Q9NZ53 605 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 ADAMTS1Q9UHI8 967 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 ANO9A1A5B4 782 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 hCG_1984214I3L0E3 225 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 POLRMTO00411 1230 aaKnown RBP17.94■□□□□ 0.46
TRIM27-202ENST00000377199 CASP5P51878 434 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 ADAM9Q13443 819 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 CDC37Q16543 378 aaPredicted RBP17.94■□□□□ 0.46
TRIM27-202ENST00000377199 DNAJC21Q5F1R6 531 aaKnown RBP17.94■□□□□ 0.46
TRIM27-202ENST00000377199 TCERG1LQ5VWI1 586 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 PPP4R3AQ6IN85 833 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 ZNF713Q8N859 430 aaPredicted RBP17.94■□□□□ 0.46
TRIM27-202ENST00000377199 SPATA4Q8NEY3 305 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 FAM71BQ8TC56 605 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 TEKT1Q969V4 418 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 PURBQ96QR8 312 aaKnown RBP17.94■□□□□ 0.46
TRIM27-202ENST00000377199 ANO3Q9BYT9 981 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 CDK5RAP2Q96SN8 1893 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 SEMA3FQ13275 785 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 SEPT2Q15019 361 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 DCAF17Q5H9S7 520 aaPredicted RBP17.94■□□□□ 0.46
TRIM27-202ENST00000377199 SFMBT2Q5VUG0 894 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 CCDC65Q8IXS2 484 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 ZNF622Q969S3 477 aaKnown RBP eCLIP17.94■□□□□ 0.463e-7■□□□□ 10.1
TRIM27-202ENST00000377199 COA1Q9GZY4 146 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 GOLPH3Q9H4A6 298 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 EMILIN3Q9NT22 766 aa17.94■□□□□ 0.46
TRIM27-202ENST00000377199 IGKV6D-41A0A0C4DH26 115 aa17.93■□□□□ 0.46
TRIM27-202ENST00000377199 ESYT3A0FGR9 886 aa17.93■□□□□ 0.46
TRIM27-202ENST00000377199 DDTLA6NHG4 134 aaPredicted RBP17.93■□□□□ 0.46
TRIM27-202ENST00000377199 SYF2O95926 243 aaKnown RBP17.93■□□□□ 0.46
TRIM27-202ENST00000377199 PPARDQ03181 441 aa17.93■□□□□ 0.46
TRIM27-202ENST00000377199 GPATCH4Q5T3I0 446 aaKnown RBP17.93■□□□□ 0.46
TRIM27-202ENST00000377199 SLFN13Q68D06 897 aa17.93■□□□□ 0.46
TRIM27-202ENST00000377199 MSL1Q68DK7 614 aa17.93■□□□□ 0.46
TRIM27-202ENST00000377199 PACSIN1Q9BY11 444 aa17.93■□□□□ 0.46
TRIM27-202ENST00000377199 DNAJC18Q9H819 358 aa17.93■□□□□ 0.46
TRIM27-202ENST00000377199 SFI1A8K8P3 1242 aa17.93■□□□□ 0.46
TRIM27-202ENST00000377199 TLR2O60603 784 aa17.93■□□□□ 0.46
TRIM27-202ENST00000377199 SLC9C1Q4G0N8 1177 aa17.93■□□□□ 0.46
TRIM27-202ENST00000377199 APOBEC3HQ6NTF7 200 aaKnown RBP17.93■□□□□ 0.46
TRIM27-202ENST00000377199 CCNI2Q6ZMN8 369 aaPredicted RBP17.93■□□□□ 0.46
TRIM27-202ENST00000377199 SCFD1Q8WVM8 642 aa17.93■□□□□ 0.46
TRIM27-202ENST00000377199 TUBBP07437 444 aa17.92■□□□□ 0.46
TRIM27-202ENST00000377199 ACTN2P35609 894 aa17.92■□□□□ 0.46
TRIM27-202ENST00000377199 NOVP48745 357 aa17.92■□□□□ 0.46
TRIM27-202ENST00000377199 CLK2P49760 499 aaKnown RBP17.92■□□□□ 0.46
TRIM27-202ENST00000377199 IQCEQ6IPM2 695 aa17.92■□□□□ 0.46
TRIM27-202ENST00000377199 LRRC27Q9C0I9 530 aa17.92■□□□□ 0.46
TRIM27-202ENST00000377199 NR2F2P24468 414 aa17.92■□□□□ 0.46
TRIM27-202ENST00000377199 CDK17Q00537 523 aa17.92■□□□□ 0.46
TRIM27-202ENST00000377199 CERKLQ49MI3 558 aaPredicted RBP17.92■□□□□ 0.46
TRIM27-202ENST00000377199 CYP2W1Q8TAV3 490 aa17.92■□□□□ 0.46
TRIM27-202ENST00000377199 P2RX7Q99572 595 aaKnown RBP17.92■□□□□ 0.46
TRIM27-202ENST00000377199 LCMT1Q9UIC8 334 aa17.92■□□□□ 0.46
TRIM27-202ENST00000377199 HYOU1Q9Y4L1 999 aa17.92■□□□□ 0.46
TRIM27-202ENST00000377199 ZSCAN5CA6NGD5 496 aaPredicted RBP17.91■□□□□ 0.46
TRIM27-202ENST00000377199 PALMO75781 387 aa17.91■□□□□ 0.46
TRIM27-202ENST00000377199 CYP11B2P19099 503 aa17.91■□□□□ 0.46
TRIM27-202ENST00000377199 PAFAH1B1P43034 410 aa17.91■□□□□ 0.46
TRIM27-202ENST00000377199 CRKP46108 304 aa17.91■□□□□ 0.46
TRIM27-202ENST00000377199 ORC2Q13416 577 aaPredicted RBP17.91■□□□□ 0.46
TRIM27-202ENST00000377199 HGSNATQ68CP4 663 aa17.91■□□□□ 0.46
TRIM27-202ENST00000377199 TTC19Q6DKK2 380 aaPredicted RBP17.91■□□□□ 0.46
TRIM27-202ENST00000377199 RPGRIP1Q96KN7 1286 aa17.91■□□□□ 0.46
TRIM27-202ENST00000377199 NOX5Q96PH1 765 aa17.91■□□□□ 0.46
TRIM27-202ENST00000377199 IKZF4Q9H2S9 585 aa17.91■□□□□ 0.46
TRIM27-202ENST00000377199 RBM12Q9NTZ6 932 aaKnown RBP17.91■□□□□ 0.46
TRIM27-202ENST00000377199 NOL4O94818 638 aa17.91■□□□□ 0.46
TRIM27-202ENST00000377199 PRPF6O94906 941 aaKnown RBP17.91■□□□□ 0.46
TRIM27-202ENST00000377199 ADRA2BP18089 450 aa17.91■□□□□ 0.46
TRIM27-202ENST00000377199 MCM3P25205 808 aa17.91■□□□□ 0.46
TRIM27-202ENST00000377199 HNRNPH3P31942 346 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms