RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 FDPSP14324 419 aaKnown RBP14.01□□□□□ -0.17
VRK3-202ENST00000377011 ACLYP53396 1101 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 TRIM60Q495X7 471 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 SLC39A5Q6ZMH5 540 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 SH3RF1Q7Z6J0 888 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 TLK2Q86UE8 772 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 SMAP1Q8IYB5 467 aaPredicted RBP14.01□□□□□ -0.17
VRK3-202ENST00000377011 CEP57L1Q8IYX8 460 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 DNERQ8NFT8 737 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 BPIFA3Q9BQP9 254 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 PDCD2LQ9BRP1 358 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 HTATIP2Q9BUP3 242 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 CCDC94Q9BW85 323 aaPredicted RBP14.01□□□□□ -0.17
VRK3-202ENST00000377011 WDR11Q9BZH6 1224 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 VTA1Q9NP79 307 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 DOCK5Q9H7D0 1870 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 KBTBD13C9JR72 458 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 ASGR1P07306 291 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 NR3C2P08235 984 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 SMARCA1P28370 1054 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 PDE4DQ08499 809 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 NTRK3Q16288 839 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 LY6KQ17RY6 165 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 ARHGEF16Q5VV41 709 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 CCDC62Q6P9F0 684 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 SEPT14Q6ZU15 432 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 CCDC186Q7Z3E2 898 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 MCF2L2Q86YR7 1114 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 DRC7Q8IY82 874 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 FSIP1Q8NA03 581 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 PHKBQ93100 1093 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 GOLPH3LQ9H4A5 285 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 PNMA2Q9UL42 364 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 COLQQ9Y215 455 aaPredicted RBP14.01□□□□□ -0.17
VRK3-202ENST00000377011 GRIN2DO15399 1336 aa14□□□□□ -0.17
VRK3-202ENST00000377011 GCOM1H8Y6P7 765 aaPredicted RBP14□□□□□ -0.17
VRK3-202ENST00000377011 CDKL5O76039 1030 aa14□□□□□ -0.17
VRK3-202ENST00000377011 POLR2MP0CAP2 368 aa14□□□□□ -0.17
VRK3-202ENST00000377011 MYCLP12524 364 aaPredicted RBP14□□□□□ -0.17
VRK3-202ENST00000377011 ME1P48163 572 aa14□□□□□ -0.17
VRK3-202ENST00000377011 METAP2P50579 478 aaKnown RBP eCLIP14□□□□□ -0.17
VRK3-202ENST00000377011 RTP1P59025 263 aa14□□□□□ -0.17
VRK3-202ENST00000377011 MRPS9P82933 396 aaKnown RBP14□□□□□ -0.17
VRK3-202ENST00000377011 SP2Q02086 613 aa14□□□□□ -0.17
VRK3-202ENST00000377011 PGM5Q15124 567 aa14□□□□□ -0.17
VRK3-202ENST00000377011 SYCP1Q15431 976 aa14□□□□□ -0.17
VRK3-202ENST00000377011 PKN1Q16512 942 aa14□□□□□ -0.17
VRK3-202ENST00000377011 DUSP28Q4G0W2 176 aa14□□□□□ -0.17
VRK3-202ENST00000377011 GNASQ5JWF2 1037 aa14□□□□□ -0.17
VRK3-202ENST00000377011 CXCL17Q6UXB2 119 aa14□□□□□ -0.17
VRK3-202ENST00000377011 HEATR3Q7Z4Q2 680 aa14□□□□□ -0.17
VRK3-202ENST00000377011 RNF180Q86T96 592 aa14□□□□□ -0.17
VRK3-202ENST00000377011 FMR1NBQ8N0W7 255 aaPredicted RBP14□□□□□ -0.17
VRK3-202ENST00000377011 LINC00301Q8NCQ3 95 aa14□□□□□ -0.17
VRK3-202ENST00000377011 FBXO18Q8NFZ0 1043 aa14□□□□□ -0.17
VRK3-202ENST00000377011 NSUN6Q8TEA1 469 aaKnown RBP14□□□□□ -0.17
VRK3-202ENST00000377011 C8orf76Q96K31 380 aa14□□□□□ -0.17
VRK3-202ENST00000377011 LZTS2Q9BRK4 669 aa14□□□□□ -0.17
VRK3-202ENST00000377011 ATP11BQ9Y2G3 1177 aa14□□□□□ -0.17
VRK3-202ENST00000377011 MYH7BA7E2Y1 1941 aa14□□□□□ -0.17
VRK3-202ENST00000377011 ITGB8P26012 769 aa13.99□□□□□ -0.17
VRK3-202ENST00000377011 GNAQP50148 359 aa13.99□□□□□ -0.17
VRK3-202ENST00000377011 PSMC6P62333 389 aa13.99□□□□□ -0.17
VRK3-202ENST00000377011 SNX17Q15036 470 aa13.99□□□□□ -0.17
VRK3-202ENST00000377011 IQSEC1Q6DN90 963 aa13.99□□□□□ -0.17
VRK3-202ENST00000377011 CHRDL2Q6WN34 429 aa13.99□□□□□ -0.17
VRK3-202ENST00000377011 SYNE3Q6ZMZ3 975 aa13.99□□□□□ -0.17
VRK3-202ENST00000377011 NID2Q14112 1375 aa13.99□□□□□ -0.17
VRK3-202ENST00000377011 BECN2A8MW95 431 aa13.98□□□□□ -0.17
VRK3-202ENST00000377011 STXBP3O00186 592 aa13.98□□□□□ -0.17
VRK3-202ENST00000377011 CST5P28325 142 aaPredicted RBP13.98□□□□□ -0.17
VRK3-202ENST00000377011 NKX3-2P78367 333 aa13.98□□□□□ -0.17
VRK3-202ENST00000377011 SEMA3FQ13275 785 aa13.98□□□□□ -0.17
VRK3-202ENST00000377011 VSIG10LQ86VR7 867 aa13.98□□□□□ -0.17
VRK3-202ENST00000377011 C17orf53Q8N3J3 647 aaPredicted RBP13.98□□□□□ -0.17
VRK3-202ENST00000377011 PRO3102Q9H379 93 aa13.98□□□□□ -0.17
VRK3-202ENST00000377011 KCND1Q9NSA2 647 aa13.98□□□□□ -0.17
VRK3-202ENST00000377011 RBM28Q9NW13 759 aaKnown RBP13.98□□□□□ -0.17
VRK3-202ENST00000377011 TMEM260Q9NX78 707 aa13.98□□□□□ -0.17
VRK3-202ENST00000377011 SEC63Q9UGP8 760 aaKnown RBP13.98□□□□□ -0.17
VRK3-202ENST00000377011 PCDHA7Q9UN72 937 aa13.98□□□□□ -0.17
VRK3-202ENST00000377011 CPLX1O14810 134 aa13.98□□□□□ -0.17
VRK3-202ENST00000377011 CTIFO43310 598 aaKnown RBP13.98□□□□□ -0.17
VRK3-202ENST00000377011 TXNP10599 105 aaKnown RBP13.98□□□□□ -0.17
VRK3-202ENST00000377011 TLE2Q04725 743 aa13.98□□□□□ -0.17
VRK3-202ENST00000377011 STK38Q15208 465 aa13.98□□□□□ -0.17
VRK3-202ENST00000377011 FSCN1Q16658 493 aaKnown RBP13.98□□□□□ -0.17
VRK3-202ENST00000377011 MYSM1Q5VVJ2 828 aa13.98□□□□□ -0.17
VRK3-202ENST00000377011 C11orf57Q6ZUT1 292 aaPredicted RBP13.98□□□□□ -0.17
VRK3-202ENST00000377011 ORC3Q9UBD5 711 aaPredicted RBP13.98□□□□□ -0.17
VRK3-202ENST00000377011 PAXBP1Q9Y5B6 917 aa13.98□□□□□ -0.17
VRK3-202ENST00000377011 FRMPD4Q14CM0 1322 aa13.98□□□□□ -0.17
VRK3-202ENST00000377011 LTBP2Q14767 1821 aa13.97□□□□□ -0.17
VRK3-202ENST00000377011 TRIM43BA6NCK2 446 aa13.97□□□□□ -0.17
VRK3-202ENST00000377011 CAPN2P17655 700 aa13.97□□□□□ -0.17
VRK3-202ENST00000377011 GSDMDP57764 484 aa13.97□□□□□ -0.17
VRK3-202ENST00000377011 CEBPZQ03701 1054 aaKnown RBP13.97□□□□□ -0.17
VRK3-202ENST00000377011 STXBP2Q15833 593 aa13.97□□□□□ -0.17
VRK3-202ENST00000377011 CPLX2Q6PUV4 134 aaKnown RBP13.97□□□□□ -0.17
VRK3-202ENST00000377011 DHX40Q8IX18 779 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms