RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 ZNF215Q9UL58 517 aaPredicted RBP21.32■■□□□ 1
HDAC6-202ENST00000376610 COG5Q9UP83 839 aa21.32■■□□□ 1
HDAC6-202ENST00000376610 FRMPD4Q14CM0 1322 aa21.31■■□□□ 1
HDAC6-202ENST00000376610 CCDC69A6NI79 296 aa21.31■■□□□ 1
HDAC6-202ENST00000376610 ARHGEF15O94989 841 aa21.31■■□□□ 1
HDAC6-202ENST00000376610 GNAT1P11488 350 aa21.31■■□□□ 1
HDAC6-202ENST00000376610 SMARCA1P28370 1054 aa21.31■■□□□ 1
HDAC6-202ENST00000376610 IRX6P78412 446 aaPredicted RBP21.31■■□□□ 1
HDAC6-202ENST00000376610 GRB10Q13322 594 aa21.31■■□□□ 1
HDAC6-202ENST00000376610 XRRA1Q6P2D8 792 aa21.31■■□□□ 1
HDAC6-202ENST00000376610 CYFIP1Q7L576 1253 aa21.31■■□□□ 1
HDAC6-202ENST00000376610 TMCO2Q7Z6W1 182 aaPredicted RBP21.31■■□□□ 1
HDAC6-202ENST00000376610 TMTC2Q8N394 836 aa21.31■■□□□ 1
HDAC6-202ENST00000376610 WNT8BQ93098 351 aa21.31■■□□□ 1
HDAC6-202ENST00000376610 LY9Q9HBG7 655 aa21.31■■□□□ 1
HDAC6-202ENST00000376610 RTEL1Q9NZ71 1219 aa21.31■■□□□ 1
HDAC6-202ENST00000376610 TCF20Q9UGU0 1960 aaKnown RBP21.3■■□□□ 1
HDAC6-202ENST00000376610 LCHNA4D1U4 455 aa21.3■■□□□ 1
HDAC6-202ENST00000376610 SPATA31C2B4DYI2 1134 aa21.3■■□□□ 1
HDAC6-202ENST00000376610 PRC1O43663 620 aa21.3■■□□□ 1
HDAC6-202ENST00000376610 AMHP03971 560 aa21.3■■□□□ 1
HDAC6-202ENST00000376610 SMIM10L2AP0DMW4 78 aa21.3■■□□□ 1
HDAC6-202ENST00000376610 SMIM10L2BP0DMW5 78 aa21.3■■□□□ 1
HDAC6-202ENST00000376610 MCM5P33992 734 aa21.3■■□□□ 1
HDAC6-202ENST00000376610 MRPS9P82933 396 aaKnown RBP21.3■■□□□ 1
HDAC6-202ENST00000376610 TFF2Q03403 129 aa21.3■■□□□ 1
HDAC6-202ENST00000376610 TRAF7Q6Q0C0 670 aa21.3■■□□□ 1
HDAC6-202ENST00000376610 NLRX1Q86UT6 975 aa21.3■■□□□ 1
HDAC6-202ENST00000376610 CAND2O75155 1236 aa21.29■■□□□ 1
HDAC6-202ENST00000376610 MBTPS1Q14703 1052 aa21.29■■□□□ 1
HDAC6-202ENST00000376610 PCNX4Q63HM2 1172 aa21.29■■□□□ 1
HDAC6-202ENST00000376610 FAM117BQ6P1L5 589 aa21.29■■□□□ 1
HDAC6-202ENST00000376610 GIMAP8Q8ND71 665 aaPredicted RBP21.29■■□□□ 1
HDAC6-202ENST00000376610 TMEM87BQ96K49 555 aa21.29■■□□□ 1
HDAC6-202ENST00000376610 TGS1Q96RS0 853 aaKnown RBP21.29■■□□□ 1
HDAC6-202ENST00000376610 MYL10Q9BUA6 226 aa21.29■■□□□ 1
HDAC6-202ENST00000376610 LMCD1Q9NZU5 365 aa21.29■■□□□ 1
HDAC6-202ENST00000376610 MTUS1Q9ULD2 1270 aa21.29■■□□□ 1
HDAC6-202ENST00000376610 KAT6AQ92794 2004 aa21.29■■□□□ 1
HDAC6-202ENST00000376610 DOCK5Q9H7D0 1870 aa21.28■■□□□ 1
HDAC6-202ENST00000376610 COL4A4P53420 1690 aaPredicted RBP21.28■■□□□ 1
HDAC6-202ENST00000376610 PIK3CDO00329 1044 aa21.28■■□□□ 1
HDAC6-202ENST00000376610 CALM1P0DP23 149 aa21.28■■□□□ 1
HDAC6-202ENST00000376610 CALM2P0DP24 149 aa21.28■■□□□ 1
HDAC6-202ENST00000376610 CALM3P0DP25 149 aa21.28■■□□□ 1
HDAC6-202ENST00000376610 HIC1Q14526 733 aa21.28■■□□□ 1
HDAC6-202ENST00000376610 KRT40Q6A162 431 aa21.28■■□□□ 1
HDAC6-202ENST00000376610 USP17L6PQ6QN14 398 aa21.28■■□□□ 1
HDAC6-202ENST00000376610 DBF4BQ8NFT6 615 aa21.28■■□□□ 1
HDAC6-202ENST00000376610 HLA-CQ95604 372 aa21.28■■□□□ 1
HDAC6-202ENST00000376610 GPR20Q99678 358 aa21.28■■□□□ 1
HDAC6-202ENST00000376610 SENP7Q9BQF6 1050 aa21.28■■□□□ 1
HDAC6-202ENST00000376610 RNPEPQ9H4A4 650 aa21.28■■□□□ 1
HDAC6-202ENST00000376610 INSL6Q9Y581 213 aa21.28■■□□□ 1
HDAC6-202ENST00000376610 MICAL3Q7RTP6 2002 aa21.28■■□□□ 1
HDAC6-202ENST00000376610 TREHO43280 583 aa21.27■■□□□ 1
HDAC6-202ENST00000376610 BMP1P13497 986 aa21.27■■□□□ 1
HDAC6-202ENST00000376610 SP4Q02446 784 aa21.27■■□□□ 1
HDAC6-202ENST00000376610 TCTN1Q2MV58 587 aa21.27■■□□□ 1
HDAC6-202ENST00000376610 MYOCDQ8IZQ8 938 aa21.27■■□□□ 1
HDAC6-202ENST00000376610 GDPD5Q8WTR4 605 aa21.27■■□□□ 1
HDAC6-202ENST00000376610 SEPT8Q92599 483 aa21.27■■□□□ 1
HDAC6-202ENST00000376610 CDHR1Q96JP9 859 aa21.27■■□□□ 1
HDAC6-202ENST00000376610 LINC01553A4QN01 128 aa21.26■□□□□ 0.99
HDAC6-202ENST00000376610 CTSHP09668 335 aa21.26■□□□□ 0.99
HDAC6-202ENST00000376610 HOXC8P31273 242 aa21.26■□□□□ 0.99
HDAC6-202ENST00000376610 KCNQ1P51787 676 aa21.26■□□□□ 0.99
HDAC6-202ENST00000376610 ERVK-21P61565 698 aa21.26■□□□□ 0.99
HDAC6-202ENST00000376610 UTP14CQ5TAP6 766 aaKnown RBP21.26■□□□□ 0.99
HDAC6-202ENST00000376610 SPRED2Q7Z698 418 aa21.26■□□□□ 0.99
HDAC6-202ENST00000376610 BCAS3Q9H6U6 928 aa21.26■□□□□ 0.99
HDAC6-202ENST00000376610 PSTPIP2Q9H939 334 aa21.26■□□□□ 0.99
HDAC6-202ENST00000376610 SLC12A7Q9Y666 1083 aa21.26■□□□□ 0.99
HDAC6-202ENST00000376610 SIP14410 1827 aa21.25■□□□□ 0.99
HDAC6-202ENST00000376610 SH2B2O14492 632 aaPredicted RBP21.25■□□□□ 0.99
HDAC6-202ENST00000376610 LPXNO60711 386 aa21.25■□□□□ 0.99
HDAC6-202ENST00000376610 LIFRP42702 1097 aa21.25■□□□□ 0.99
HDAC6-202ENST00000376610 SEMA3FQ13275 785 aa21.25■□□□□ 0.99
HDAC6-202ENST00000376610 PLEKHG4Q58EX7 1191 aa21.25■□□□□ 0.99
HDAC6-202ENST00000376610 GPRASP2Q96D09 838 aa21.25■□□□□ 0.99
HDAC6-202ENST00000376610 BRWD1Q9NSI6 2320 aa21.25■□□□□ 0.99
HDAC6-202ENST00000376610 SETD4Q9NVD3 440 aa21.25■□□□□ 0.99
HDAC6-202ENST00000376610 XIRP2A4UGR9 3374 aa21.25■□□□□ 0.99
HDAC6-202ENST00000376610 SPDYE3A6NKU9 549 aa21.24■□□□□ 0.99
HDAC6-202ENST00000376610 MEIS2O14770 477 aa21.24■□□□□ 0.99
HDAC6-202ENST00000376610 PLEKHA8P1O95397 391 aa21.24■□□□□ 0.99
HDAC6-202ENST00000376610 ARHGAP4P98171 946 aa21.24■□□□□ 0.99
HDAC6-202ENST00000376610 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.24■□□□□ 0.99
HDAC6-202ENST00000376610 TRIM50Q86XT4 487 aa21.24■□□□□ 0.99
HDAC6-202ENST00000376610 LSG1Q9H089 658 aaKnown RBP21.24■□□□□ 0.99
HDAC6-202ENST00000376610 SUGCTQ9HAC7 445 aa21.24■□□□□ 0.99
HDAC6-202ENST00000376610 REV3LO60673 3130 aa21.24■□□□□ 0.99
HDAC6-202ENST00000376610 SLC27A2O14975 620 aa21.23■□□□□ 0.99
HDAC6-202ENST00000376610 RXRAP19793 462 aa21.23■□□□□ 0.99
HDAC6-202ENST00000376610 SYNE3Q6ZMZ3 975 aa21.23■□□□□ 0.99
HDAC6-202ENST00000376610 SRBD1Q8N5C6 995 aaKnown RBP21.23■□□□□ 0.99
HDAC6-202ENST00000376610 FBXO22Q8NEZ5 403 aa21.23■□□□□ 0.99
HDAC6-202ENST00000376610 APBB2Q92870 758 aa21.23■□□□□ 0.99
HDAC6-202ENST00000376610 NECAB3Q96P71 396 aaPredicted RBP21.23■□□□□ 0.99
HDAC6-202ENST00000376610 YME1L1Q96TA2 773 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms