RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 TFR2Q9UP52 801 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 LRCH1Q9Y2L9 728 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 SRPRBQ9Y5M8 271 aaKnown RBP11.09□□□□□ -0.63
CD28-202ENST00000374481 ORC4O43929 436 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 PRPF6O94906 941 aaKnown RBP11.09□□□□□ -0.63
CD28-202ENST00000374481 CA4P22748 312 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 PTPREP23469 700 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 HSD17B3P37058 310 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 TTMPQ5BVD1 217 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 C1orf146Q5VVC0 180 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 KRT80Q6KB66 452 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 CAPN12Q6ZSI9 719 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 TMTC3Q6ZXV5 915 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 APPBP2Q92624 585 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 CAVIN3Q969G5 261 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 EPSTI1Q96J88 318 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 TEX13AQ9BXU3 409 aaPredicted RBP11.09□□□□□ -0.63
CD28-202ENST00000374481 NT5C3AQ9H0P0 336 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 ITIH6Q6UXX5 1313 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 A0A0G2JND7 137 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 FAM170AA1A519 330 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 RAB27AP51159 221 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 DRAXINQ8NBI3 349 aaPredicted RBP11.09□□□□□ -0.63
CD28-202ENST00000374481 PRCCQ92733 491 aaPredicted RBP11.09□□□□□ -0.63
CD28-202ENST00000374481 SUCLG2Q96I99 432 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 RBM41Q96IZ5 413 aaKnown RBP11.09□□□□□ -0.63
CD28-202ENST00000374481 NDNQ99608 321 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 UBXN6Q9BZV1 441 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 THAP9Q9H5L6 903 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 AGTP01019 485 aa11.08□□□□□ -0.63
CD28-202ENST00000374481 CALM1P0DP23 149 aa11.08□□□□□ -0.63
CD28-202ENST00000374481 CALM2P0DP24 149 aa11.08□□□□□ -0.63
CD28-202ENST00000374481 CALM3P0DP25 149 aa11.08□□□□□ -0.63
CD28-202ENST00000374481 ERFP50548 548 aa11.08□□□□□ -0.63
CD28-202ENST00000374481 PTGDRQ13258 359 aa11.08□□□□□ -0.63
CD28-202ENST00000374481 CDC37Q16543 378 aaPredicted RBP11.08□□□□□ -0.63
CD28-202ENST00000374481 ZMYM1Q5SVZ6 1142 aa11.08□□□□□ -0.63
CD28-202ENST00000374481 IRGCQ6NXR0 463 aa11.08□□□□□ -0.63
CD28-202ENST00000374481 SLC17A8Q8NDX2 589 aa11.08□□□□□ -0.63
CD28-202ENST00000374481 HIPK4Q8NE63 616 aa11.08□□□□□ -0.63
CD28-202ENST00000374481 NMD3Q96D46 503 aaKnown RBP11.08□□□□□ -0.63
CD28-202ENST00000374481 TBC1D23Q9NUY8 699 aa11.08□□□□□ -0.63
CD28-202ENST00000374481 ATXN10Q9UBB4 475 aa11.08□□□□□ -0.63
CD28-202ENST00000374481 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.08□□□□□ -0.63
CD28-202ENST00000374481 PREX2Q70Z35 1606 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 E7ENQ6 273 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 ATP9AO75110 1047 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 S100BP04271 92 aaPredicted RBP11.08□□□□□ -0.64
CD28-202ENST00000374481 HSPA9P38646 679 aaKnown RBP11.08□□□□□ -0.64
CD28-202ENST00000374481 SPARCL1Q14515 664 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 DYMQ7RTS9 669 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 HEATR3Q7Z4Q2 680 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 ERICH1Q86X53 443 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 WDR75Q8IWA0 830 aaKnown RBP11.08□□□□□ -0.64
CD28-202ENST00000374481 SRRM1Q8IYB3 904 aaKnown RBP11.08□□□□□ -0.64
CD28-202ENST00000374481 MAB21L3Q8N8X9 362 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 NFATC2IPQ8NCF5 419 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 DHTKD1Q96HY7 919 aaPredicted RBP11.08□□□□□ -0.64
CD28-202ENST00000374481 UNC45AQ9H3U1 944 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 DCLRE1BQ9H816 532 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 DMAP1Q9NPF5 467 aaPredicted RBP11.08□□□□□ -0.64
CD28-202ENST00000374481 NDUFA13Q9P0J0 144 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 ADAMTS1Q9UHI8 967 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 NUB1Q9Y5A7 615 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 KDM5AP29375 1690 aaKnown RBP11.08□□□□□ -0.64
CD28-202ENST00000374481 hCG_1642624A0A1W2PR95 340 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 TSPY2A6NKD2 308 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 TRAPPC3O43617 180 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 RASSF9O75901 435 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 FGGP02679 453 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 VIL1P09327 827 aaKnown RBP11.08□□□□□ -0.64
CD28-202ENST00000374481 ERVK-24P63145 666 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 BLMHQ13867 455 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 TOM1L2Q6ZVM7 507 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 P2RX5Q93086 422 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 FAM192AQ9GZU8 254 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 CAPN11Q9UMQ6 739 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 PACSIN2Q9UNF0 486 aaPredicted RBP11.08□□□□□ -0.64
CD28-202ENST00000374481 MYOM2P54296 1465 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 CFAP69A5D8W1 941 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 HSPA2P54652 639 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 IKQ13123 557 aaPredicted RBP11.08□□□□□ -0.64
CD28-202ENST00000374481 NLRP7Q8WX94 980 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 MAML3Q96JK9 1138 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 NDEL1Q9GZM8 345 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 FOXP1Q9H334 677 aaPredicted RBP11.08□□□□□ -0.64
CD28-202ENST00000374481 TLR7Q9NYK1 1049 aaKnown RBP11.08□□□□□ -0.64
CD28-202ENST00000374481 AMACRQ9UHK6 382 aa11.08□□□□□ -0.64
CD28-202ENST00000374481 TBCAO75347 108 aaKnown RBP11.07□□□□□ -0.64
CD28-202ENST00000374481 ECEL1O95672 775 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 SCNN1BP51168 640 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 XRCC4Q13426 336 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 RCN1Q15293 331 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 COPS6Q7L5N1 327 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 TSEN2Q8NCE0 465 aaKnown RBP11.07□□□□□ -0.64
CD28-202ENST00000374481 XAGE3Q8WTP9 111 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 NGLY1Q96IV0 654 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 TRAPPC9Q96Q05 1148 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 ANKRD2Q9GZV1 360 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 GPHNQ9NQX3 736 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms