RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 PURAQ00577 322 aaKnown RBP20.85■□□□□ 0.93
PBX3-205ENST00000373492 NR5A1Q13285 461 aa20.85■□□□□ 0.93
PBX3-205ENST00000373492 LAMC2Q13753 1193 aa20.85■□□□□ 0.93
PBX3-205ENST00000373492 NEDD9Q14511 834 aa20.85■□□□□ 0.93
PBX3-205ENST00000373492 PIK3AP1Q6ZUJ8 805 aa20.85■□□□□ 0.93
PBX3-205ENST00000373492 NIPA1Q7RTP0 329 aa20.85■□□□□ 0.93
PBX3-205ENST00000373492 DHX37Q8IY37 1157 aaKnown RBP20.85■□□□□ 0.93
PBX3-205ENST00000373492 SLC43A3Q8NBI5 491 aa20.85■□□□□ 0.93
PBX3-205ENST00000373492 GIMAP8Q8ND71 665 aaPredicted RBP20.85■□□□□ 0.93
PBX3-205ENST00000373492 COLQQ9Y215 455 aaPredicted RBP20.85■□□□□ 0.93
PBX3-205ENST00000373492 MYL3P08590 195 aa20.84■□□□□ 0.93
PBX3-205ENST00000373492 CLTBP09497 229 aa20.84■□□□□ 0.93
PBX3-205ENST00000373492 SETQ01105 290 aaPredicted RBP20.84■□□□□ 0.93
PBX3-205ENST00000373492 ITGA7Q13683 1181 aa20.84■□□□□ 0.93
PBX3-205ENST00000373492 INF2Q27J81 1249 aa20.84■□□□□ 0.93
PBX3-205ENST00000373492 GDF15Q99988 308 aa20.84■□□□□ 0.93
PBX3-205ENST00000373492 MTG1Q9BT17 334 aaPredicted RBP20.84■□□□□ 0.93
PBX3-205ENST00000373492 FOXP1Q9H334 677 aaPredicted RBP20.84■□□□□ 0.93
PBX3-205ENST00000373492 PRO3102Q9H379 93 aa20.84■□□□□ 0.93
PBX3-205ENST00000373492 PDLIM7Q9NR12 457 aa20.84■□□□□ 0.93
PBX3-205ENST00000373492 MEIS1O00470 390 aa20.83■□□□□ 0.93
PBX3-205ENST00000373492 GGPS1O95749 300 aa20.83■□□□□ 0.93
PBX3-205ENST00000373492 PDCP20941 246 aa20.83■□□□□ 0.93
PBX3-205ENST00000373492 UBA1P22314 1058 aaKnown RBP20.83■□□□□ 0.93
PBX3-205ENST00000373492 CIITAP33076 1130 aa20.83■□□□□ 0.93
PBX3-205ENST00000373492 BMP8BP34820 402 aa20.83■□□□□ 0.93
PBX3-205ENST00000373492 SEMA3FQ13275 785 aa20.83■□□□□ 0.93
PBX3-205ENST00000373492 CELF3Q5SZQ8 465 aaKnown RBP20.83■□□□□ 0.93
PBX3-205ENST00000373492 LARP1BQ659C4 914 aaKnown RBP20.83■□□□□ 0.93
PBX3-205ENST00000373492 NEK8Q86SG6 692 aa20.83■□□□□ 0.93
PBX3-205ENST00000373492 PLA2G4DQ86XP0 818 aa20.83■□□□□ 0.93
PBX3-205ENST00000373492 PPTC7Q8NI37 304 aa20.83■□□□□ 0.93
PBX3-205ENST00000373492 AFG1LQ8WV93 481 aa20.83■□□□□ 0.93
PBX3-205ENST00000373492 NAP1L4Q99733 375 aaKnown RBP20.83■□□□□ 0.93
PBX3-205ENST00000373492 SENP7Q9BQF6 1050 aa20.83■□□□□ 0.93
PBX3-205ENST00000373492 MLXIPQ9HAP2 919 aa20.83■□□□□ 0.93
PBX3-205ENST00000373492 KCNH7Q9NS40 1196 aa20.83■□□□□ 0.93
PBX3-205ENST00000373492 MMP3P08254 477 aa20.82■□□□□ 0.92
PBX3-205ENST00000373492 MAGEA10P43363 369 aaPredicted RBP20.82■□□□□ 0.92
PBX3-205ENST00000373492 FAAP100Q0VG06 881 aa20.82■□□□□ 0.92
PBX3-205ENST00000373492 MYSM1Q5VVJ2 828 aa20.82■□□□□ 0.92
PBX3-205ENST00000373492 MOXD1Q6UVY6 613 aa20.82■□□□□ 0.92
PBX3-205ENST00000373492 CYP2W1Q8TAV3 490 aa20.82■□□□□ 0.92
PBX3-205ENST00000373492 TNFRSF25Q93038 417 aa20.82■□□□□ 0.92
PBX3-205ENST00000373492 LBHD1Q9BQE6 289 aaPredicted RBP20.82■□□□□ 0.92
PBX3-205ENST00000373492 PRDM5Q9NQX1 630 aaPredicted RBP20.82■□□□□ 0.92
PBX3-205ENST00000373492 FOXD4L1Q9NU39 408 aa20.82■□□□□ 0.92
PBX3-205ENST00000373492 SCN10AQ9Y5Y9 1956 aa20.82■□□□□ 0.92
PBX3-205ENST00000373492 GRIN2DO15399 1336 aa20.81■□□□□ 0.92
PBX3-205ENST00000373492 FAM86B1E9PN63 330 aa20.81■□□□□ 0.92
PBX3-205ENST00000373492 KIAA0355O15063 1070 aa20.81■□□□□ 0.92
PBX3-205ENST00000373492 TLR3O15455 904 aaKnown RBP20.81■□□□□ 0.92
PBX3-205ENST00000373492 FAM86B2P0C5J1 330 aa20.81■□□□□ 0.92
PBX3-205ENST00000373492 SP2Q02086 613 aa20.81■□□□□ 0.92
PBX3-205ENST00000373492 BECN1Q14457 450 aa20.81■□□□□ 0.92
PBX3-205ENST00000373492 DGKDQ16760 1214 aa20.81■□□□□ 0.92
PBX3-205ENST00000373492 LETM2Q2VYF4 491 aa20.81■□□□□ 0.92
PBX3-205ENST00000373492 PRR16Q569H4 304 aa20.81■□□□□ 0.92
PBX3-205ENST00000373492 FAM126BQ8IXS8 530 aa20.81■□□□□ 0.92
PBX3-205ENST00000373492 TMEM39AQ9NV64 488 aa20.81■□□□□ 0.92
PBX3-205ENST00000373492 IGLV3-22A0A075B6J6 115 aa20.8■□□□□ 0.92
PBX3-205ENST00000373492 A0A1W2PPC1 479 aa20.8■□□□□ 0.92
PBX3-205ENST00000373492 TRIM43BA6NCK2 446 aa20.8■□□□□ 0.92
PBX3-205ENST00000373492 ARP10275 920 aa20.8■□□□□ 0.92
PBX3-205ENST00000373492 GCFC2P16383 781 aaKnown RBP20.8■□□□□ 0.92
PBX3-205ENST00000373492 PSMC6P62333 389 aa20.8■□□□□ 0.92
PBX3-205ENST00000373492 HABP4Q5JVS0 413 aaKnown RBP20.8■□□□□ 0.92
PBX3-205ENST00000373492 MCTP1Q6DN14 999 aa20.8■□□□□ 0.92
PBX3-205ENST00000373492 CYFIP1Q7L576 1253 aa20.8■□□□□ 0.92
PBX3-205ENST00000373492 SH3RF1Q7Z6J0 888 aa20.8■□□□□ 0.92
PBX3-205ENST00000373492 TRIM43Q96BQ3 446 aaPredicted RBP20.8■□□□□ 0.92
PBX3-205ENST00000373492 SPATA33Q96N06 139 aa20.8■□□□□ 0.92
PBX3-205ENST00000373492 SDF4Q9BRK5 362 aa20.8■□□□□ 0.92
PBX3-205ENST00000373492 PKD2L1Q9P0L9 805 aa20.8■□□□□ 0.92
PBX3-205ENST00000373492 RANBP2P49792 3224 aaKnown RBP20.8■□□□□ 0.92
PBX3-205ENST00000373492 NFASCO94856 1347 aa20.79■□□□□ 0.92
PBX3-205ENST00000373492 TRIP12Q14669 1992 aaPredicted RBP20.79■□□□□ 0.92
PBX3-205ENST00000373492 NOP56O00567 594 aaKnown RBP20.79■□□□□ 0.92
PBX3-205ENST00000373492 SORBS3O60504 671 aa20.79■□□□□ 0.92
PBX3-205ENST00000373492 PPFIA4O75335 1185 aa20.79■□□□□ 0.92
PBX3-205ENST00000373492 CD4P01730 458 aa20.79■□□□□ 0.92
PBX3-205ENST00000373492 HOXD8P13378 290 aaPredicted RBP20.79■□□□□ 0.92
PBX3-205ENST00000373492 KCNA2P16389 499 aa20.79■□□□□ 0.92
PBX3-205ENST00000373492 EARS2Q5JPH6 523 aaKnown RBP20.79■□□□□ 0.92
PBX3-205ENST00000373492 NFRKBQ6P4R8 1299 aa20.79■□□□□ 0.92
PBX3-205ENST00000373492 METTL7BQ6UX53 244 aa20.79■□□□□ 0.92
PBX3-205ENST00000373492 NOSTRINQ8IVI9 506 aa20.79■□□□□ 0.92
PBX3-205ENST00000373492 AGO4Q9HCK5 861 aaKnown RBP20.79■□□□□ 0.92
PBX3-205ENST00000373492 CYP3A7-CYP3A51PA0A087WV96 503 aa20.78■□□□□ 0.92
PBX3-205ENST00000373492 FAM205CA6NFA0 338 aa20.78■□□□□ 0.92
PBX3-205ENST00000373492 CCNT1O60563 726 aaKnown RBP20.78■□□□□ 0.92
PBX3-205ENST00000373492 ATP9AO75110 1047 aa20.78■□□□□ 0.92
PBX3-205ENST00000373492 TDP2O95551 362 aa20.78■□□□□ 0.92
PBX3-205ENST00000373492 CYP3A7P24462 503 aa20.78■□□□□ 0.92
PBX3-205ENST00000373492 U2AF2P26368 475 aaKnown RBP eCLIP20.78■□□□□ 0.92
PBX3-205ENST00000373492 MDM2Q00987 491 aaPredicted RBP20.78■□□□□ 0.92
PBX3-205ENST00000373492 Q4G0T1 1027 aa20.78■□□□□ 0.92
PBX3-205ENST00000373492 PPP4R3AQ6IN85 833 aa20.78■□□□□ 0.92
PBX3-205ENST00000373492 ZNF577Q9BSK1 485 aa20.78■□□□□ 0.92
PBX3-205ENST00000373492 DDX25Q9UHL0 483 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms