RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 AFG1LQ8WV93 481 aa10.85□□□□□ -0.67
TMEM254-201ENST00000372273 CRYGNQ8WXF5 182 aa10.85□□□□□ -0.67
TMEM254-201ENST00000372273 MPHOSPH6Q99547 160 aaKnown RBP10.85□□□□□ -0.67
TMEM254-201ENST00000372273 ZSCAN16Q9H4T2 348 aaPredicted RBP10.85□□□□□ -0.67
TMEM254-201ENST00000372273 KCNH7Q9NS40 1196 aa10.85□□□□□ -0.67
TMEM254-201ENST00000372273 RBM47A0AV96 593 aaKnown RBP10.85□□□□□ -0.67
TMEM254-201ENST00000372273 TDP2O95551 362 aa10.85□□□□□ -0.67
TMEM254-201ENST00000372273 GGPS1O95749 300 aa10.85□□□□□ -0.67
TMEM254-201ENST00000372273 MMP1P03956 469 aa10.85□□□□□ -0.67
TMEM254-201ENST00000372273 ATP2B1P20020 1258 aa10.85□□□□□ -0.67
TMEM254-201ENST00000372273 ARHGAP1Q07960 439 aa10.85□□□□□ -0.67
TMEM254-201ENST00000372273 MTMR1Q13613 665 aa10.85□□□□□ -0.67
TMEM254-201ENST00000372273 FSCN1Q16658 493 aaKnown RBP10.85□□□□□ -0.67
TMEM254-201ENST00000372273 UVSSAQ2YD98 709 aa10.85□□□□□ -0.67
TMEM254-201ENST00000372273 PRR16Q569H4 304 aa10.85□□□□□ -0.67
TMEM254-201ENST00000372273 CCSAPQ6IQ19 270 aaPredicted RBP10.85□□□□□ -0.67
TMEM254-201ENST00000372273 DIS3L2Q8IYB7 885 aaKnown RBP10.85□□□□□ -0.67
TMEM254-201ENST00000372273 SAMD3Q8N6K7 520 aa10.85□□□□□ -0.67
TMEM254-201ENST00000372273 OR6J1Q8NGC5 347 aa10.85□□□□□ -0.67
TMEM254-201ENST00000372273 PDLIM2Q96JY6 352 aa10.85□□□□□ -0.67
TMEM254-201ENST00000372273 C8orf76Q96K31 380 aa10.85□□□□□ -0.67
TMEM254-201ENST00000372273 SPATA32Q96LK8 384 aa10.85□□□□□ -0.67
TMEM254-201ENST00000372273 PDE4DIPQ5VU43 2346 aa10.84□□□□□ -0.67
TMEM254-201ENST00000372273 SPATA31C2B4DYI2 1134 aa10.84□□□□□ -0.67
TMEM254-201ENST00000372273 KIF28PB7ZC32 967 aa10.84□□□□□ -0.67
TMEM254-201ENST00000372273 DDX39AO00148 427 aaKnown RBP10.84□□□□□ -0.67
TMEM254-201ENST00000372273 ZNF76P36508 570 aa10.84□□□□□ -0.67
TMEM254-201ENST00000372273 ACLYP53396 1101 aa10.84□□□□□ -0.67
TMEM254-201ENST00000372273 GJA9P57773 515 aa10.84□□□□□ -0.67
TMEM254-201ENST00000372273 AP3B2Q13367 1082 aa10.84□□□□□ -0.67
TMEM254-201ENST00000372273 CEP55Q53EZ4 464 aa10.84□□□□□ -0.67
TMEM254-201ENST00000372273 MYSM1Q5VVJ2 828 aa10.84□□□□□ -0.67
TMEM254-201ENST00000372273 RNF180Q86T96 592 aa10.84□□□□□ -0.67
TMEM254-201ENST00000372273 ZSCAN30Q86W11 494 aa10.84□□□□□ -0.67
TMEM254-201ENST00000372273 KLHDC9Q8NEP7 349 aa10.84□□□□□ -0.67
TMEM254-201ENST00000372273 VTI1AQ96AJ9 217 aa10.84□□□□□ -0.67
TMEM254-201ENST00000372273 UBIAD1Q9Y5Z9 338 aa10.84□□□□□ -0.67
TMEM254-201ENST00000372273 MYH15Q9Y2K3 1946 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 IGLV3-22A0A075B6J6 115 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 A0A1W2PQ45 241 aaPredicted RBP10.83□□□□□ -0.68
TMEM254-201ENST00000372273 A0A1W2PQY0 241 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 B4DLN1 442 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 DNM1LO00429 736 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 FOSP01100 380 aaPredicted RBP10.83□□□□□ -0.68
TMEM254-201ENST00000372273 ZNF286BP0CG31 522 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 COL6A1P12109 1028 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 XBP1P17861 261 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 ITGB3BPQ13352 177 aaPredicted RBP10.83□□□□□ -0.68
TMEM254-201ENST00000372273 LRRC26Q2I0M4 334 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 LETM2Q2VYF4 491 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 TRMT1LQ7Z2T5 733 aaKnown RBP10.83□□□□□ -0.68
TMEM254-201ENST00000372273 TRIM50Q86XT4 487 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 DHX37Q8IY37 1157 aaKnown RBP10.83□□□□□ -0.68
TMEM254-201ENST00000372273 ARRDC4Q8NCT1 418 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 FBXO18Q8NFZ0 1043 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 BICD2Q8TD16 824 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 WASF1Q92558 559 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 TNFRSF25Q93038 417 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 LENG9Q96B70 501 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 SPATA33Q96N06 139 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 MXRA8Q9BRK3 442 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 AP5M1Q9H0R1 490 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 CFAP45Q9UL16 551 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 KBTBD13C9JR72 458 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 MEIS1O00470 390 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 SLC37A4O43826 429 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 KCNA2P16389 499 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 TRIM29Q14134 588 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 CELF3Q5SZQ8 465 aaKnown RBP10.83□□□□□ -0.68
TMEM254-201ENST00000372273 NECAB2Q7Z6G3 386 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 MAF1Q9H063 256 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 C11orf49Q9H6J7 331 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 MLXIPQ9HAP2 919 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 JADE2Q9NQC1 790 aa10.83□□□□□ -0.68
TMEM254-201ENST00000372273 LOC102724159A0A0B4J2E5 919 aa10.82□□□□□ -0.68
TMEM254-201ENST00000372273 CCDC194A0A1B0GVG4 234 aa10.82□□□□□ -0.68
TMEM254-201ENST00000372273 MYL3P08590 195 aa10.82□□□□□ -0.68
TMEM254-201ENST00000372273 KRT2P35908 639 aa10.82□□□□□ -0.68
TMEM254-201ENST00000372273 PWP2Q15269 919 aaKnown RBP10.82□□□□□ -0.68
TMEM254-201ENST00000372273 GNPTABQ3T906 1256 aa10.82□□□□□ -0.68
TMEM254-201ENST00000372273 DAGLBQ8NCG7 672 aa10.82□□□□□ -0.68
TMEM254-201ENST00000372273 DPF3Q92784 378 aa10.82□□□□□ -0.68
TMEM254-201ENST00000372273 GLT8D2Q9H1C3 349 aa10.82□□□□□ -0.68
TMEM254-201ENST00000372273 SPC25Q9HBM1 224 aa10.82□□□□□ -0.68
TMEM254-201ENST00000372273 CCDC39Q9UFE4 941 aa10.82□□□□□ -0.68
TMEM254-201ENST00000372273 GRIN2DO15399 1336 aa10.82□□□□□ -0.68
TMEM254-201ENST00000372273 A6NJR5 290 aa10.81□□□□□ -0.68
TMEM254-201ENST00000372273 CCNT1O60563 726 aaKnown RBP10.81□□□□□ -0.68
TMEM254-201ENST00000372273 GH1P01241 217 aa10.81□□□□□ -0.68
TMEM254-201ENST00000372273 RESTQ13127 1097 aa10.81□□□□□ -0.68
TMEM254-201ENST00000372273 NONOQ15233 471 aaKnown RBP eCLIP10.81□□□□□ -0.68
TMEM254-201ENST00000372273 PLA2G4DQ86XP0 818 aa10.81□□□□□ -0.68
TMEM254-201ENST00000372273 UPF3AQ9H1J1 476 aaKnown RBP10.81□□□□□ -0.68
TMEM254-201ENST00000372273 NUP62CLQ9H1M0 184 aa10.81□□□□□ -0.68
TMEM254-201ENST00000372273 LRRC37A2A6NM11 1700 aa10.81□□□□□ -0.68
TMEM254-201ENST00000372273 MSH4O15457 936 aa10.81□□□□□ -0.68
TMEM254-201ENST00000372273 PTMAP06454 111 aaKnown RBP10.81□□□□□ -0.68
TMEM254-201ENST00000372273 MMP3P08254 477 aa10.81□□□□□ -0.68
TMEM254-201ENST00000372273 CCDC192P0DO97 292 aa10.81□□□□□ -0.68
TMEM254-201ENST00000372273 TGFB3P10600 412 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms