RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 MLXIPQ9HAP2 919 aa18.5■□□□□ 0.55
TMEM53-203ENST00000372242 DDX39AO00148 427 aaKnown RBP18.49■□□□□ 0.55
TMEM53-203ENST00000372242 BRD1O95696 1058 aa18.49■□□□□ 0.55
TMEM53-203ENST00000372242 F13A1P00488 732 aa18.49■□□□□ 0.55
TMEM53-203ENST00000372242 BEX3Q00994 111 aa18.49■□□□□ 0.55
TMEM53-203ENST00000372242 NEDD9Q14511 834 aa18.49■□□□□ 0.55
TMEM53-203ENST00000372242 ETNPPLQ8TBG4 499 aa18.49■□□□□ 0.55
TMEM53-203ENST00000372242 IPO9Q96P70 1041 aaKnown RBP18.49■□□□□ 0.55
TMEM53-203ENST00000372242 CTAGE5O15320 804 aa18.49■□□□□ 0.55
TMEM53-203ENST00000372242 NEMFO60524 1076 aa18.49■□□□□ 0.55
TMEM53-203ENST00000372242 ADAMTS4O75173 837 aa18.49■□□□□ 0.55
TMEM53-203ENST00000372242 FARP2O94887 1054 aaPredicted RBP18.49■□□□□ 0.55
TMEM53-203ENST00000372242 TFRCP02786 760 aaKnown RBP18.49■□□□□ 0.55
TMEM53-203ENST00000372242 GJA8P48165 433 aa18.49■□□□□ 0.55
TMEM53-203ENST00000372242 GJA9P57773 515 aa18.49■□□□□ 0.55
TMEM53-203ENST00000372242 HSDL1Q3SXM5 330 aa18.49■□□□□ 0.55
TMEM53-203ENST00000372242 AFG1LQ8WV93 481 aa18.49■□□□□ 0.55
TMEM53-203ENST00000372242 HAS1Q92839 578 aa18.49■□□□□ 0.55
TMEM53-203ENST00000372242 TMEM60Q9H2L4 133 aa18.49■□□□□ 0.55
TMEM53-203ENST00000372242 KCNMB3Q9NPA1 279 aa18.49■□□□□ 0.55
TMEM53-203ENST00000372242 Q9Y3F1 56 aa18.49■□□□□ 0.55
TMEM53-203ENST00000372242 KIAA0100Q14667 2235 aaKnown RBP18.48■□□□□ 0.55
TMEM53-203ENST00000372242 DHX15O43143 795 aaKnown RBP18.48■□□□□ 0.55
TMEM53-203ENST00000372242 LAMC2Q13753 1193 aa18.48■□□□□ 0.55
TMEM53-203ENST00000372242 METTL7BQ6UX53 244 aa18.48■□□□□ 0.55
TMEM53-203ENST00000372242 SLC5A5Q92911 643 aa18.48■□□□□ 0.55
TMEM53-203ENST00000372242 SPATA33Q96N06 139 aa18.48■□□□□ 0.55
TMEM53-203ENST00000372242 SDF4Q9BRK5 362 aa18.48■□□□□ 0.55
TMEM53-203ENST00000372242 FTOQ9C0B1 505 aaKnown RBP eCLIP18.48■□□□□ 0.55
TMEM53-203ENST00000372242 CRISPLD2Q9H0B8 497 aa18.48■□□□□ 0.55
TMEM53-203ENST00000372242 UPF3AQ9H1J1 476 aaKnown RBP18.48■□□□□ 0.55
TMEM53-203ENST00000372242 OGDHLQ9ULD0 1010 aa18.48■□□□□ 0.55
TMEM53-203ENST00000372242 CCDC85CA6NKD9 419 aa18.47■□□□□ 0.55
TMEM53-203ENST00000372242 LRRC41Q15345 812 aa18.47■□□□□ 0.55
TMEM53-203ENST00000372242 CALCRLQ16602 461 aa18.47■□□□□ 0.55
TMEM53-203ENST00000372242 FSCN1Q16658 493 aaKnown RBP18.47■□□□□ 0.55
TMEM53-203ENST00000372242 GNASQ5JWF2 1037 aa18.47■□□□□ 0.55
TMEM53-203ENST00000372242 GIMAP8Q8ND71 665 aaPredicted RBP18.47■□□□□ 0.55
TMEM53-203ENST00000372242 SPC25Q9HBM1 224 aa18.47■□□□□ 0.55
TMEM53-203ENST00000372242 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.47■□□□□ 0.55
TMEM53-203ENST00000372242 MARCH6O60337 910 aa18.46■□□□□ 0.55
TMEM53-203ENST00000372242 LRCH2Q5VUJ6 765 aa18.46■□□□□ 0.55
TMEM53-203ENST00000372242 EMID1Q96A84 441 aaPredicted RBP18.46■□□□□ 0.55
TMEM53-203ENST00000372242 JPH1Q9HDC5 661 aaPredicted RBP18.46■□□□□ 0.55
TMEM53-203ENST00000372242 TBC1D22BQ9NU19 505 aa18.46■□□□□ 0.55
TMEM53-203ENST00000372242 SLC9A2Q9UBY0 812 aa18.46■□□□□ 0.55
TMEM53-203ENST00000372242 NFASCO94856 1347 aa18.46■□□□□ 0.55
TMEM53-203ENST00000372242 GAS7O60861 476 aa18.46■□□□□ 0.55
TMEM53-203ENST00000372242 PSMD10O75832 226 aa18.46■□□□□ 0.55
TMEM53-203ENST00000372242 CCNE2O96020 404 aa18.46■□□□□ 0.55
TMEM53-203ENST00000372242 EN2P19622 333 aaPredicted RBP18.46■□□□□ 0.55
TMEM53-203ENST00000372242 CEBPZQ03701 1054 aaKnown RBP18.46■□□□□ 0.55
TMEM53-203ENST00000372242 PTGDRQ13258 359 aa18.46■□□□□ 0.55
TMEM53-203ENST00000372242 RNF180Q86T96 592 aa18.46■□□□□ 0.55
TMEM53-203ENST00000372242 C4orf32Q8N8J7 132 aa18.46■□□□□ 0.55
TMEM53-203ENST00000372242 KLHDC9Q8NEP7 349 aa18.46■□□□□ 0.55
TMEM53-203ENST00000372242 PPTC7Q8NI37 304 aa18.46■□□□□ 0.55
TMEM53-203ENST00000372242 FAM20AQ96MK3 541 aa18.46■□□□□ 0.55
TMEM53-203ENST00000372242 MTMR9Q96QG7 549 aa18.46■□□□□ 0.55
TMEM53-203ENST00000372242 RIT2Q99578 217 aa18.46■□□□□ 0.55
TMEM53-203ENST00000372242 CLIC4Q9Y696 253 aa18.46■□□□□ 0.55
TMEM53-203ENST00000372242 A6NJR5 290 aa18.45■□□□□ 0.54
TMEM53-203ENST00000372242 NOP56O00567 594 aaKnown RBP18.45■□□□□ 0.54
TMEM53-203ENST00000372242 TBX3O15119 743 aa18.45■□□□□ 0.54
TMEM53-203ENST00000372242 MMP3P08254 477 aa18.45■□□□□ 0.54
TMEM53-203ENST00000372242 TXKP42681 527 aa18.45■□□□□ 0.54
TMEM53-203ENST00000372242 KCNA10Q16322 511 aa18.45■□□□□ 0.54
TMEM53-203ENST00000372242 ARRDC4Q8NCT1 418 aa18.45■□□□□ 0.54
TMEM53-203ENST00000372242 CHMP2AO43633 222 aa18.44■□□□□ 0.54
TMEM53-203ENST00000372242 BAG4O95429 457 aaKnown RBP18.44■□□□□ 0.54
TMEM53-203ENST00000372242 CPT1AP50416 773 aa18.44■□□□□ 0.54
TMEM53-203ENST00000372242 SOX10P56693 466 aa18.44■□□□□ 0.54
TMEM53-203ENST00000372242 NKX3-2P78367 333 aa18.44■□□□□ 0.54
TMEM53-203ENST00000372242 ORC2Q13416 577 aaPredicted RBP18.44■□□□□ 0.54
TMEM53-203ENST00000372242 SF3A1Q15459 793 aaKnown RBP18.44■□□□□ 0.54
TMEM53-203ENST00000372242 CHAMP1Q96JM3 812 aa18.44■□□□□ 0.54
TMEM53-203ENST00000372242 USP28Q96RU2 1077 aa18.44■□□□□ 0.54
TMEM53-203ENST00000372242 GPR20Q99678 358 aa18.44■□□□□ 0.54
TMEM53-203ENST00000372242 TEKT3Q9BXF9 490 aa18.44■□□□□ 0.54
TMEM53-203ENST00000372242 TFIP11Q9UBB9 837 aaKnown RBP18.44■□□□□ 0.54
TMEM53-203ENST00000372242 MYH15Q9Y2K3 1946 aa18.44■□□□□ 0.54
TMEM53-203ENST00000372242 OR52Z1P0C646 297 aa18.44■□□□□ 0.54
TMEM53-203ENST00000372242 MNX1P50219 401 aaPredicted RBP18.44■□□□□ 0.54
TMEM53-203ENST00000372242 ACTR2P61160 394 aa18.44■□□□□ 0.54
TMEM53-203ENST00000372242 NUCB2P80303 420 aa18.44■□□□□ 0.54
TMEM53-203ENST00000372242 CCSAPQ6IQ19 270 aaPredicted RBP18.44■□□□□ 0.54
TMEM53-203ENST00000372242 SLFN12Q8IYM2 578 aa18.44■□□□□ 0.54
TMEM53-203ENST00000372242 UNC45AQ9H3U1 944 aa18.44■□□□□ 0.54
TMEM53-203ENST00000372242 TTC12Q9H892 705 aaPredicted RBP18.44■□□□□ 0.54
TMEM53-203ENST00000372242 DNAH12Q6ZR08 3092 aa18.44■□□□□ 0.54
TMEM53-203ENST00000372242 GSTTP1A0A1W2PQM5 241 aa18.43■□□□□ 0.54
TMEM53-203ENST00000372242 ASGR1P07306 291 aa18.43■□□□□ 0.54
TMEM53-203ENST00000372242 CST5P28325 142 aaPredicted RBP18.43■□□□□ 0.54
TMEM53-203ENST00000372242 BRDTQ58F21 947 aaPredicted RBP18.43■□□□□ 0.54
TMEM53-203ENST00000372242 DIS3LQ8TF46 1054 aaKnown RBP18.43■□□□□ 0.54
TMEM53-203ENST00000372242 VAV3Q9UKW4 847 aa18.43■□□□□ 0.54
TMEM53-203ENST00000372242 PCDHA12Q9UN75 941 aa18.43■□□□□ 0.54
TMEM53-203ENST00000372242 KBTBD13C9JR72 458 aa18.42■□□□□ 0.54
TMEM53-203ENST00000372242 DNM1LO00429 736 aa18.42■□□□□ 0.54
TMEM53-203ENST00000372242 MYL3P08590 195 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms