RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 KDM3AQ9Y4C1 1321 aa21.14■□□□□ 0.97
TMEM53-202ENST00000372237 GOLGA6BA6NDN3 693 aa21.13■□□□□ 0.97
TMEM53-202ENST00000372237 NCK2O43639 380 aa21.13■□□□□ 0.97
TMEM53-202ENST00000372237 GCFC2P16383 781 aaKnown RBP21.13■□□□□ 0.97
TMEM53-202ENST00000372237 HOXA10P31260 410 aaPredicted RBP21.13■□□□□ 0.97
TMEM53-202ENST00000372237 SLC16A2P36021 539 aa21.13■□□□□ 0.97
TMEM53-202ENST00000372237 MTMR8Q96EF0 704 aa21.13■□□□□ 0.97
TMEM53-202ENST00000372237 KLRG2A4D1S0 409 aaPredicted RBP21.13■□□□□ 0.97
TMEM53-202ENST00000372237 AGPSO00116 658 aa21.13■□□□□ 0.97
TMEM53-202ENST00000372237 ZBTB5O15062 677 aa21.13■□□□□ 0.97
TMEM53-202ENST00000372237 FAM83BQ5T0W9 1011 aa21.13■□□□□ 0.97
TMEM53-202ENST00000372237 SFMBT2Q5VUG0 894 aa21.13■□□□□ 0.97
TMEM53-202ENST00000372237 RNF10Q8N5U6 811 aaKnown RBP21.13■□□□□ 0.97
TMEM53-202ENST00000372237 PSTPIP2Q9H939 334 aa21.13■□□□□ 0.97
TMEM53-202ENST00000372237 DDX4Q9NQI0 724 aaKnown RBP21.13■□□□□ 0.97
TMEM53-202ENST00000372237 SMARCAL1Q9NZC9 954 aa21.13■□□□□ 0.97
TMEM53-202ENST00000372237 EHD2Q9NZN4 543 aa21.13■□□□□ 0.97
TMEM53-202ENST00000372237 E9PMD0 336 aa21.12■□□□□ 0.97
TMEM53-202ENST00000372237 SLC7A5Q01650 507 aa21.12■□□□□ 0.97
TMEM53-202ENST00000372237 GPATCH4Q5T3I0 446 aaKnown RBP21.12■□□□□ 0.97
TMEM53-202ENST00000372237 SND1Q7KZF4 910 aaKnown RBP eCLIP21.12■□□□□ 0.97
TMEM53-202ENST00000372237 SRLQ86TD4 932 aa21.12■□□□□ 0.97
TMEM53-202ENST00000372237 TLR10Q9BXR5 811 aa21.12■□□□□ 0.97
TMEM53-202ENST00000372237 SWAP70Q9UH65 585 aa21.12■□□□□ 0.97
TMEM53-202ENST00000372237 MYO1CO00159 1063 aa21.12■□□□□ 0.97
TMEM53-202ENST00000372237 APBA3O96018 575 aa21.12■□□□□ 0.97
TMEM53-202ENST00000372237 MRPS25P82663 173 aaKnown RBP21.12■□□□□ 0.97
TMEM53-202ENST00000372237 KLHDC7AQ5VTJ3 777 aa21.12■□□□□ 0.97
TMEM53-202ENST00000372237 LRRC31Q6UY01 552 aa21.12■□□□□ 0.97
TMEM53-202ENST00000372237 KCTD1Q719H9 257 aa21.12■□□□□ 0.97
TMEM53-202ENST00000372237 NELFCDQ8IXH7 590 aa21.12■□□□□ 0.97
TMEM53-202ENST00000372237 CCDC65Q8IXS2 484 aa21.12■□□□□ 0.97
TMEM53-202ENST00000372237 CEP63Q96MT8 703 aa21.12■□□□□ 0.97
TMEM53-202ENST00000372237 LSM14BQ9BX40 385 aaKnown RBP21.12■□□□□ 0.97
TMEM53-202ENST00000372237 FGFBP2Q9BYJ0 223 aa21.12■□□□□ 0.97
TMEM53-202ENST00000372237 LCMT1Q9UIC8 334 aa21.12■□□□□ 0.97
TMEM53-202ENST00000372237 KIAA1024Q9UPX6 916 aa21.12■□□□□ 0.97
TMEM53-202ENST00000372237 USP17L10C9JJH3 530 aa21.11■□□□□ 0.97
TMEM53-202ENST00000372237 RBAK-RBAKDNI3L0D1 243 aa21.11■□□□□ 0.97
TMEM53-202ENST00000372237 NOL4O94818 638 aa21.11■□□□□ 0.97
TMEM53-202ENST00000372237 SERPING1P05155 500 aa21.11■□□□□ 0.97
TMEM53-202ENST00000372237 POLR2FP61218 127 aaKnown RBP21.11■□□□□ 0.97
TMEM53-202ENST00000372237 HYIQ5T013 277 aa21.11■□□□□ 0.97
TMEM53-202ENST00000372237 SYN2Q92777 582 aaPredicted RBP21.11■□□□□ 0.97
TMEM53-202ENST00000372237 AKT1S1Q96B36 256 aa21.11■□□□□ 0.97
TMEM53-202ENST00000372237 UIMC1Q96RL1 719 aa21.11■□□□□ 0.97
TMEM53-202ENST00000372237 LUC7LQ9NQ29 371 aaKnown RBP21.11■□□□□ 0.97
TMEM53-202ENST00000372237 STIM2Q9P246 746 aa21.11■□□□□ 0.97
TMEM53-202ENST00000372237 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.11■□□□□ 0.97
TMEM53-202ENST00000372237 MPHOSPH10O00566 681 aaKnown RBP21.11■□□□□ 0.97
TMEM53-202ENST00000372237 GNA14O95837 355 aa21.11■□□□□ 0.97
TMEM53-202ENST00000372237 FOXR1Q6PIV2 292 aa21.11■□□□□ 0.97
TMEM53-202ENST00000372237 COL23A1Q86Y22 540 aaPredicted RBP21.11■□□□□ 0.97
TMEM53-202ENST00000372237 FEZ2Q9UHY8 353 aaPredicted RBP21.11■□□□□ 0.97
TMEM53-202ENST00000372237 TSKSQ9UJT2 592 aa21.11■□□□□ 0.97
TMEM53-202ENST00000372237 RRP15Q9Y3B9 282 aaKnown RBP21.11■□□□□ 0.97
TMEM53-202ENST00000372237 RIMBP2O15034 1052 aa21.1■□□□□ 0.97
TMEM53-202ENST00000372237 TLR2O60603 784 aa21.1■□□□□ 0.97
TMEM53-202ENST00000372237 CACNB1Q02641 598 aaPredicted RBP21.1■□□□□ 0.97
TMEM53-202ENST00000372237 HERC4Q5GLZ8 1057 aaPredicted RBP21.1■□□□□ 0.97
TMEM53-202ENST00000372237 HAUS3Q68CZ6 603 aa21.1■□□□□ 0.97
TMEM53-202ENST00000372237 C8orf74Q6P047 294 aa21.1■□□□□ 0.97
TMEM53-202ENST00000372237 CRAMP1Q96RY5 1269 aa21.1■□□□□ 0.97
TMEM53-202ENST00000372237 NAP1L4Q99733 375 aaKnown RBP21.1■□□□□ 0.97
TMEM53-202ENST00000372237 PLA2G4BP0C869 781 aa21.1■□□□□ 0.97
TMEM53-202ENST00000372237 EPHB4P54760 987 aa21.1■□□□□ 0.97
TMEM53-202ENST00000372237 TMC4Q7Z404 712 aa21.1■□□□□ 0.97
TMEM53-202ENST00000372237 GPBP1Q86WP2 473 aa21.1■□□□□ 0.97
TMEM53-202ENST00000372237 TRIM34Q9BYJ4 488 aa21.1■□□□□ 0.97
TMEM53-202ENST00000372237 ATP6V0A2Q9Y487 856 aa21.1■□□□□ 0.97
TMEM53-202ENST00000372237 POTEB3A0JP26 581 aa21.09■□□□□ 0.97
TMEM53-202ENST00000372237 GOLGA6CA6NDK9 693 aa21.09■□□□□ 0.97
TMEM53-202ENST00000372237 POTECB2RU33 542 aa21.09■□□□□ 0.97
TMEM53-202ENST00000372237 GOLGA6DP0CG33 693 aa21.09■□□□□ 0.97
TMEM53-202ENST00000372237 SHMT1P34896 483 aa21.09■□□□□ 0.97
TMEM53-202ENST00000372237 CFAP221Q4G0U5 840 aa21.09■□□□□ 0.97
TMEM53-202ENST00000372237 POTEBQ6S5H4 581 aa21.09■□□□□ 0.97
TMEM53-202ENST00000372237 TRIM59Q8IWR1 403 aa21.09■□□□□ 0.97
TMEM53-202ENST00000372237 FAM76AQ8TAV0 307 aa21.09■□□□□ 0.97
TMEM53-202ENST00000372237 ZFP91Q96JP5 570 aaPredicted RBP21.09■□□□□ 0.97
TMEM53-202ENST00000372237 KANSL2Q9H9L4 492 aa21.09■□□□□ 0.97
TMEM53-202ENST00000372237 GOLGA6AQ9NYA3 693 aa21.09■□□□□ 0.97
TMEM53-202ENST00000372237 PCDHA2Q9Y5H9 948 aa21.09■□□□□ 0.97
TMEM53-202ENST00000372237 ARFGEF1Q9Y6D6 1849 aa21.09■□□□□ 0.97
TMEM53-202ENST00000372237 MYO3BQ8WXR4 1341 aa21.09■□□□□ 0.97
TMEM53-202ENST00000372237 EPS15P42566 896 aa21.09■□□□□ 0.97
TMEM53-202ENST00000372237 MARSP56192 900 aaKnown RBP21.09■□□□□ 0.97
TMEM53-202ENST00000372237 NLGN1Q8N2Q7 840 aa21.09■□□□□ 0.97
TMEM53-202ENST00000372237 EMILIN3Q9NT22 766 aa21.09■□□□□ 0.97
TMEM53-202ENST00000372237 RBM12Q9NTZ6 932 aaKnown RBP21.09■□□□□ 0.97
TMEM53-202ENST00000372237 USP40Q9NVE5 1235 aa21.09■□□□□ 0.97
TMEM53-202ENST00000372237 ATF5Q9Y2D1 282 aaPredicted RBP21.09■□□□□ 0.97
TMEM53-202ENST00000372237 MYH4Q9Y623 1939 aa21.08■□□□□ 0.97
TMEM53-202ENST00000372237 NPHP3-ACAD11A0A0J9YXS1 232 aa21.08■□□□□ 0.97
TMEM53-202ENST00000372237 USP17L15C9J2P7 530 aa21.08■□□□□ 0.97
TMEM53-202ENST00000372237 USP17L13C9JLJ4 530 aa21.08■□□□□ 0.97
TMEM53-202ENST00000372237 USP17L11C9JVI0 530 aa21.08■□□□□ 0.97
TMEM53-202ENST00000372237 USP17L18D6R9N7 530 aa21.08■□□□□ 0.97
TMEM53-202ENST00000372237 USP17L22D6RA61 530 aa21.08■□□□□ 0.97
TMEM53-202ENST00000372237 USP17L17D6RBQ6 530 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms