RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 NFIBO00712 420 aa16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 DIAPH2O60879 1101 aa16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 ANKRD13DQ6ZTN6 518 aa16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 PROSER2Q86WR7 435 aaPredicted RBP16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 DCTN4Q9UJW0 460 aa16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 PLCG2P16885 1265 aa16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 ELF1P32519 619 aa16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 HEATR4Q86WZ0 1026 aa16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 RYBPQ8N488 228 aaPredicted RBP16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 DNAJC17Q9NVM6 304 aaKnown RBP16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 TMOD1P28289 359 aa16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 PPP6R3Q5H9R7 873 aaPredicted RBP16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 BTN2A2Q8WVV5 523 aa16.47■□□□□ 0.23
GTF3C4-201ENST00000372146 USH1GQ495M9 461 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 PANK4Q9NVE7 773 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 USE1Q9NZ43 259 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 SOWAHDA6NJG2 315 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 DTNBO60941 627 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 COPB1P53618 953 aaKnown RBP16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 THOC5Q13769 683 aaKnown RBP16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 HACD3Q9P035 362 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 GSPT1P15170 499 aaKnown RBP16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 PFKFB1P16118 471 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 PMLP29590 882 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 C10orf76Q5T2E6 689 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 BTN2A1Q7KYR7 527 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 KCTD6Q8NC69 237 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 SNX19Q92543 992 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 KLHL25Q9H0H3 589 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 LRWD1Q9UFC0 647 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 PRG3Q9Y2Y8 225 aaPredicted RBP16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 N4BP1O75113 896 aaKnown RBP16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 LRRC36Q1X8D7 754 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 ETNK1Q9HBU6 452 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 RASA4BC9J798 803 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 RASA4O43374 803 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 DLATP10515 647 aaKnown RBP16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 PYGMP11217 842 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 IFNA8P32881 189 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 IL17RAQ96F46 866 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 AGBL1Q96MI9 1066 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 IMPDH2P12268 514 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 IL15P40933 162 aaPredicted RBP16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 TPH2Q8IWU9 490 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 ARHGEF3Q9NR81 526 aa16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 V9GY48 417 aaPredicted RBP16.46■□□□□ 0.23
GTF3C4-201ENST00000372146 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.46■□□□□ 0.22
GTF3C4-201ENST00000372146 GMNCA6NCL1 334 aa16.46■□□□□ 0.22
GTF3C4-201ENST00000372146 HSPA6P17066 643 aa16.46■□□□□ 0.22
GTF3C4-201ENST00000372146 RBL2Q08999 1139 aa16.46■□□□□ 0.22
GTF3C4-201ENST00000372146 TTC25Q96NG3 672 aa16.46■□□□□ 0.22
GTF3C4-201ENST00000372146 HSPA1AP0DMV8 641 aaKnown RBP16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 HSPA1BP0DMV9 641 aaKnown RBP16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 EFTUD2Q15029 972 aaKnown RBP eCLIP16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 GPBP1Q86WP2 473 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 EXOC8Q8IYI6 725 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 ZBTB18Q99592 522 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 BATF3Q9NR55 127 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 DCDC2Q9UHG0 476 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 IL16Q14005 1332 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 FMNL1O95466 1100 aaPredicted RBP16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 MYCLP12524 364 aaPredicted RBP16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 FRA10AC1Q70Z53 315 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 SH3BP5LQ7L8J4 393 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 CNBD2Q96M20 576 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 SLFNL1Q499Z3 407 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 CHMP2BQ9UQN3 213 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 EPHB1P54762 984 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 NFRKBQ6P4R8 1299 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 PPM1KQ8N3J5 372 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 AP1M1Q9BXS5 423 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 ASPSCR1Q9BZE9 553 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 AURKCQ9UQB9 309 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 SOS1Q07889 1333 aaPredicted RBP16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 MYOCDQ8IZQ8 938 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 ANKRD13CQ8N6S4 541 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 BIN2Q9UBW5 565 aaPredicted RBP16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 TFCP2Q12800 502 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 BFSP2Q13515 415 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 PYROXD1Q8WU10 500 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 ARHGAP45Q92619 1136 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 FTOQ9C0B1 505 aaKnown RBP eCLIP16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 PARVGQ9HBI0 331 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 DISC1Q9NRI5 854 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 ARMCX3Q9UH62 379 aaPredicted RBP16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 LRRC8EQ6NSJ5 796 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 NEK8Q86SG6 692 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 ANKLE2Q86XL3 938 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 STAG2Q8N3U4 1231 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 SERTAD1Q9UHV2 236 aa16.45■□□□□ 0.22
GTF3C4-201ENST00000372146 KRT87PA6NCN2 255 aa16.44■□□□□ 0.22
GTF3C4-201ENST00000372146 MAGOHP61326 146 aaKnown RBP16.44■□□□□ 0.22
GTF3C4-201ENST00000372146 LLGL1Q15334 1064 aa16.44■□□□□ 0.22
GTF3C4-201ENST00000372146 ADALQ6DHV7 355 aa16.44■□□□□ 0.22
GTF3C4-201ENST00000372146 DARS2Q6PI48 645 aaKnown RBP16.44■□□□□ 0.22
GTF3C4-201ENST00000372146 PBKQ96KB5 322 aa16.44■□□□□ 0.22
GTF3C4-201ENST00000372146 PRDM1O75626 825 aa16.44■□□□□ 0.22
GTF3C4-201ENST00000372146 MAPK4P31152 587 aa16.44■□□□□ 0.22
GTF3C4-201ENST00000372146 ATP8B2P98198 1209 aa16.44■□□□□ 0.22
GTF3C4-201ENST00000372146 BTBD6Q96KE9 485 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms