RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 DTNBO60941 627 aa17.42■□□□□ 0.38
SS18L1-202ENST00000370848 CXCL10P02778 98 aa17.42■□□□□ 0.38
SS18L1-202ENST00000370848 AK2P54819 239 aa17.42■□□□□ 0.38
SS18L1-202ENST00000370848 NTRK3Q16288 839 aa17.42■□□□□ 0.38
SS18L1-202ENST00000370848 DGKDQ16760 1214 aa17.42■□□□□ 0.38
SS18L1-202ENST00000370848 UBE2SQ16763 222 aa17.42■□□□□ 0.38
SS18L1-202ENST00000370848 FAM47CQ5HY64 1035 aa17.42■□□□□ 0.38
SS18L1-202ENST00000370848 PPP2R2DQ66LE6 453 aa17.42■□□□□ 0.38
SS18L1-202ENST00000370848 KCNV1Q6PIU1 500 aa17.42■□□□□ 0.38
SS18L1-202ENST00000370848 CCDC155Q8N6L0 562 aa17.42■□□□□ 0.38
SS18L1-202ENST00000370848 PDCD2LQ9BRP1 358 aa17.42■□□□□ 0.38
SS18L1-202ENST00000370848 THEGQ9P2T0 379 aa17.42■□□□□ 0.38
SS18L1-202ENST00000370848 GTF2IRD1Q9UHL9 959 aa17.42■□□□□ 0.38
SS18L1-202ENST00000370848 TPCN1Q9ULQ1 816 aa17.42■□□□□ 0.38
SS18L1-202ENST00000370848 TRIP12Q14669 1992 aaPredicted RBP17.41■□□□□ 0.38
SS18L1-202ENST00000370848 STXBP3O00186 592 aa17.41■□□□□ 0.38
SS18L1-202ENST00000370848 EIF5BO60841 1220 aaKnown RBP17.41■□□□□ 0.38
SS18L1-202ENST00000370848 TGFB3P10600 412 aa17.41■□□□□ 0.38
SS18L1-202ENST00000370848 RABGGTBP53611 331 aa17.41■□□□□ 0.38
SS18L1-202ENST00000370848 LAMC2Q13753 1193 aa17.41■□□□□ 0.38
SS18L1-202ENST00000370848 PTGISQ16647 500 aa17.41■□□□□ 0.38
SS18L1-202ENST00000370848 GDF6Q6KF10 455 aaPredicted RBP17.41■□□□□ 0.38
SS18L1-202ENST00000370848 VSIG10LQ86VR7 867 aa17.41■□□□□ 0.38
SS18L1-202ENST00000370848 RETREG2Q8NC44 543 aa17.41■□□□□ 0.38
SS18L1-202ENST00000370848 DHX38Q92620 1227 aaKnown RBP17.41■□□□□ 0.38
SS18L1-202ENST00000370848 KATNAL1Q9BW62 490 aa17.41■□□□□ 0.38
SS18L1-202ENST00000370848 CCDC196A0A1B0GTZ2 297 aa17.4■□□□□ 0.38
SS18L1-202ENST00000370848 LARGE1O95461 756 aa17.4■□□□□ 0.38
SS18L1-202ENST00000370848 MYCLP12524 364 aaPredicted RBP17.4■□□□□ 0.38
SS18L1-202ENST00000370848 HOXC8P31273 242 aa17.4■□□□□ 0.38
SS18L1-202ENST00000370848 NAPAP54920 295 aa17.4■□□□□ 0.38
SS18L1-202ENST00000370848 PGM5Q15124 567 aa17.4■□□□□ 0.38
SS18L1-202ENST00000370848 PKN1Q16512 942 aa17.4■□□□□ 0.38
SS18L1-202ENST00000370848 TRIM71Q2Q1W2 868 aaKnown RBP17.4■□□□□ 0.38
SS18L1-202ENST00000370848 SEPT14Q6ZU15 432 aa17.4■□□□□ 0.38
SS18L1-202ENST00000370848 SMARCC2Q8TAQ2 1214 aa17.4■□□□□ 0.38
SS18L1-202ENST00000370848 ZNF274Q96GC6 653 aaPredicted RBP17.4■□□□□ 0.38
SS18L1-202ENST00000370848 KIF2CQ99661 725 aa17.4■□□□□ 0.38
SS18L1-202ENST00000370848 SLC26A6Q9BXS9 759 aa17.4■□□□□ 0.38
SS18L1-202ENST00000370848 ZBBXA8MT70 800 aa17.39■□□□□ 0.37
SS18L1-202ENST00000370848 ADAMTS3O15072 1205 aa17.39■□□□□ 0.37
SS18L1-202ENST00000370848 PPFIA4O75335 1185 aa17.39■□□□□ 0.37
SS18L1-202ENST00000370848 MYOGP15173 224 aa17.39■□□□□ 0.37
SS18L1-202ENST00000370848 SELPP16109 830 aa17.39■□□□□ 0.37
SS18L1-202ENST00000370848 NEK4P51957 841 aa17.39■□□□□ 0.37
SS18L1-202ENST00000370848 SCRN1Q12765 414 aa17.39■□□□□ 0.37
SS18L1-202ENST00000370848 PFKFB3Q16875 520 aaPredicted RBP17.39■□□□□ 0.37
SS18L1-202ENST00000370848 MYSM1Q5VVJ2 828 aa17.39■□□□□ 0.37
SS18L1-202ENST00000370848 TRAF7Q6Q0C0 670 aa17.39■□□□□ 0.37
SS18L1-202ENST00000370848 DEFB128Q7Z7B8 93 aa17.39■□□□□ 0.37
SS18L1-202ENST00000370848 HERC6Q8IVU3 1022 aa17.39■□□□□ 0.37
SS18L1-202ENST00000370848 ASB2Q96Q27 587 aa17.39■□□□□ 0.37
SS18L1-202ENST00000370848 PSTPIP2Q9H939 334 aa17.39■□□□□ 0.37
SS18L1-202ENST00000370848 PRDM6Q9NQX0 595 aa17.39■□□□□ 0.37
SS18L1-202ENST00000370848 MYH7BA7E2Y1 1941 aa17.39■□□□□ 0.37
SS18L1-202ENST00000370848 PIK3CDO00329 1044 aa17.38■□□□□ 0.37
SS18L1-202ENST00000370848 PRPF3O43395 683 aaKnown RBP17.38■□□□□ 0.37
SS18L1-202ENST00000370848 CA3P07451 260 aa17.38■□□□□ 0.37
SS18L1-202ENST00000370848 SCG2P13521 617 aa17.38■□□□□ 0.37
SS18L1-202ENST00000370848 IFNAR1P17181 557 aa17.38■□□□□ 0.37
SS18L1-202ENST00000370848 PSEN2P49810 448 aa17.38■□□□□ 0.37
SS18L1-202ENST00000370848 PTK7Q13308 1070 aa17.38■□□□□ 0.37
SS18L1-202ENST00000370848 MKRN4PQ13434 485 aaPredicted RBP17.38■□□□□ 0.37
SS18L1-202ENST00000370848 LRRC8DQ7L1W4 858 aa17.38■□□□□ 0.37
SS18L1-202ENST00000370848 CUL5Q93034 780 aa17.38■□□□□ 0.37
SS18L1-202ENST00000370848 PGBD1Q96JS3 809 aa17.38■□□□□ 0.37
SS18L1-202ENST00000370848 C22orf23Q9BZE7 217 aa17.38■□□□□ 0.37
SS18L1-202ENST00000370848 BARHL2Q9NY43 387 aa17.38■□□□□ 0.37
SS18L1-202ENST00000370848 NOD1Q9Y239 953 aa17.38■□□□□ 0.37
SS18L1-202ENST00000370848 MRVI1Q9Y6F6 885 aa17.38■□□□□ 0.37
SS18L1-202ENST00000370848 COL4A4P53420 1690 aaPredicted RBP17.38■□□□□ 0.37
SS18L1-202ENST00000370848 COL4A6Q14031 1691 aa17.38■□□□□ 0.37
SS18L1-202ENST00000370848 STAM2O75886 525 aa17.37■□□□□ 0.37
SS18L1-202ENST00000370848 CKBP12277 381 aa17.37■□□□□ 0.37
SS18L1-202ENST00000370848 TAP1Q03518 808 aa17.37■□□□□ 0.37
SS18L1-202ENST00000370848 CELF3Q5SZQ8 465 aaKnown RBP17.37■□□□□ 0.37
SS18L1-202ENST00000370848 PPP1R18Q6NYC8 613 aa17.37■□□□□ 0.37
SS18L1-202ENST00000370848 PPP1R13LQ8WUF5 828 aa17.37■□□□□ 0.37
SS18L1-202ENST00000370848 HDAC6Q9UBN7 1215 aa17.37■□□□□ 0.37
SS18L1-202ENST00000370848 SMCO2A6NFE2 343 aa17.36■□□□□ 0.37
SS18L1-202ENST00000370848 PFKFB2O60825 505 aa17.36■□□□□ 0.37
SS18L1-202ENST00000370848 NBNO60934 754 aa17.36■□□□□ 0.37
SS18L1-202ENST00000370848 UBA1P22314 1058 aaKnown RBP17.36■□□□□ 0.37
SS18L1-202ENST00000370848 CCND2P30279 289 aa17.36■□□□□ 0.37
SS18L1-202ENST00000370848 ICAM3P32942 547 aa17.36■□□□□ 0.37
SS18L1-202ENST00000370848 ADCY7P51828 1080 aa17.36■□□□□ 0.37
SS18L1-202ENST00000370848 WDR5P61964 334 aaKnown RBP17.36■□□□□ 0.37
SS18L1-202ENST00000370848 MRPS5P82675 430 aaKnown RBP17.36■□□□□ 0.37
SS18L1-202ENST00000370848 MRPS9P82933 396 aaKnown RBP17.36■□□□□ 0.37
SS18L1-202ENST00000370848 MFSD10Q14728 455 aa17.36■□□□□ 0.37
SS18L1-202ENST00000370848 ME3Q16798 604 aa17.36■□□□□ 0.37
SS18L1-202ENST00000370848 HSDL1Q3SXM5 330 aa17.36■□□□□ 0.37
SS18L1-202ENST00000370848 CNKSR3Q6P9H4 555 aa17.36■□□□□ 0.37
SS18L1-202ENST00000370848 DHX37Q8IY37 1157 aaKnown RBP17.36■□□□□ 0.37
SS18L1-202ENST00000370848 NECAB1Q8N987 351 aa17.36■□□□□ 0.37
SS18L1-202ENST00000370848 AIFM3Q96NN9 605 aa17.36■□□□□ 0.37
SS18L1-202ENST00000370848 INPP4AQ96PE3 977 aaPredicted RBP17.36■□□□□ 0.37
SS18L1-202ENST00000370848 C16orf70Q9BSU1 422 aa17.36■□□□□ 0.37
SS18L1-202ENST00000370848 RNF26Q9BY78 433 aaPredicted RBP17.36■□□□□ 0.37
SS18L1-202ENST00000370848 SLKQ9H2G2 1235 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms