RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 TRAF1Q13077 416 aa17.07■□□□□ 0.32
LMO4-201ENST00000370542 CUL4AQ13619 759 aa17.07■□□□□ 0.32
LMO4-201ENST00000370542 ARHGEF16Q5VV41 709 aa17.07■□□□□ 0.32
LMO4-201ENST00000370542 SEPT14Q6ZU15 432 aa17.07■□□□□ 0.32
LMO4-201ENST00000370542 OTOP2Q7RTS6 562 aa17.07■□□□□ 0.32
LMO4-201ENST00000370542 VSIG10LQ86VR7 867 aa17.07■□□□□ 0.32
LMO4-201ENST00000370542 MB21D2Q8IYB1 491 aaPredicted RBP17.07■□□□□ 0.32
LMO4-201ENST00000370542 GPT2Q8TD30 523 aa17.07■□□□□ 0.32
LMO4-201ENST00000370542 KHSRPQ92945 711 aaKnown RBP eCLIP17.07■□□□□ 0.32
LMO4-201ENST00000370542 PCDHA1Q9Y5I3 950 aa17.07■□□□□ 0.32
LMO4-201ENST00000370542 TRANK1O15050 2925 aa17.07■□□□□ 0.32
LMO4-201ENST00000370542 IFIT3O14879 490 aaKnown RBP17.06■□□□□ 0.32
LMO4-201ENST00000370542 DHX16O60231 1041 aaKnown RBP17.06■□□□□ 0.32
LMO4-201ENST00000370542 IQCF3P0C7M6 154 aa17.06■□□□□ 0.32
LMO4-201ENST00000370542 EIF2AK2P19525 551 aaKnown RBP17.06■□□□□ 0.32
LMO4-201ENST00000370542 RBL2Q08999 1139 aa17.06■□□□□ 0.32
LMO4-201ENST00000370542 PIBF1Q8WXW3 757 aa17.06■□□□□ 0.32
LMO4-201ENST00000370542 SCN5AQ14524 2016 aa17.06■□□□□ 0.32
LMO4-201ENST00000370542 TET1Q8NFU7 2136 aa17.05■□□□□ 0.32
LMO4-201ENST00000370542 FRMPD4Q14CM0 1322 aa17.05■□□□□ 0.32
LMO4-201ENST00000370542 PNMA6FA0A0J9YX94 578 aa17.05■□□□□ 0.32
LMO4-201ENST00000370542 FAM86C2PA6NEL3 165 aa17.05■□□□□ 0.32
LMO4-201ENST00000370542 HAS3O00219 553 aa17.05■□□□□ 0.32
LMO4-201ENST00000370542 BRD1O95696 1058 aa17.05■□□□□ 0.32
LMO4-201ENST00000370542 CASTP20810 708 aaKnown RBP17.05■□□□□ 0.32
LMO4-201ENST00000370542 SMARCA1P28370 1054 aa17.05■□□□□ 0.32
LMO4-201ENST00000370542 DMTNQ08495 405 aa17.05■□□□□ 0.32
LMO4-201ENST00000370542 LAMC2Q13753 1193 aa17.05■□□□□ 0.32
LMO4-201ENST00000370542 WTAPQ15007 396 aa17.05■□□□□ 0.32
LMO4-201ENST00000370542 KCNV1Q6PIU1 500 aa17.05■□□□□ 0.32
LMO4-201ENST00000370542 PPTC7Q8NI37 304 aa17.05■□□□□ 0.32
LMO4-201ENST00000370542 PIGSQ96S52 555 aa17.05■□□□□ 0.32
LMO4-201ENST00000370542 MSRAQ9UJ68 235 aa17.05■□□□□ 0.32
LMO4-201ENST00000370542 YBX2Q9Y2T7 364 aaKnown RBP17.05■□□□□ 0.32
LMO4-201ENST00000370542 SLC4A7Q9Y6M7 1214 aa17.05■□□□□ 0.32
LMO4-201ENST00000370542 TCF20Q9UGU0 1960 aaKnown RBP17.05■□□□□ 0.32
LMO4-201ENST00000370542 GBF1Q92538 1859 aa17.05■□□□□ 0.32
LMO4-201ENST00000370542 CACNA1AO00555 2505 aa17.04■□□□□ 0.32
LMO4-201ENST00000370542 TANC1Q9C0D5 1861 aa17.04■□□□□ 0.32
LMO4-201ENST00000370542 ERICH2A1L162 156 aa17.04■□□□□ 0.32
LMO4-201ENST00000370542 PI4K2BG5E9Z4 385 aa17.04■□□□□ 0.32
LMO4-201ENST00000370542 F2P00734 622 aa17.04■□□□□ 0.32
LMO4-201ENST00000370542 TGFB3P10600 412 aa17.04■□□□□ 0.32
LMO4-201ENST00000370542 BFSP2Q13515 415 aa17.04■□□□□ 0.32
LMO4-201ENST00000370542 GPNMBQ14956 572 aa17.04■□□□□ 0.32
LMO4-201ENST00000370542 SART3Q15020 963 aaKnown RBP17.04■□□□□ 0.32
LMO4-201ENST00000370542 PGM5Q15124 567 aa17.04■□□□□ 0.32
LMO4-201ENST00000370542 DGKDQ16760 1214 aa17.04■□□□□ 0.32
LMO4-201ENST00000370542 FAM47CQ5HY64 1035 aa17.04■□□□□ 0.32
LMO4-201ENST00000370542 MYSM1Q5VVJ2 828 aa17.04■□□□□ 0.32
LMO4-201ENST00000370542 RALYLQ86SE5 291 aaKnown RBP17.04■□□□□ 0.32
LMO4-201ENST00000370542 CAGE1Q8TC20 777 aa17.04■□□□□ 0.32
LMO4-201ENST00000370542 TMEM63CQ9P1W3 806 aa17.04■□□□□ 0.32
LMO4-201ENST00000370542 GTF2IRD1Q9UHL9 959 aa17.04■□□□□ 0.32
LMO4-201ENST00000370542 PCDHA11Q9Y5I1 949 aa17.04■□□□□ 0.32
LMO4-201ENST00000370542 TRIP12Q14669 1992 aaPredicted RBP17.04■□□□□ 0.32
LMO4-201ENST00000370542 TLL1O43897 1013 aa17.03■□□□□ 0.32
LMO4-201ENST00000370542 PPFIA4O75335 1185 aa17.03■□□□□ 0.32
LMO4-201ENST00000370542 KIF20AO95235 890 aa17.03■□□□□ 0.32
LMO4-201ENST00000370542 PDIA4P13667 645 aaKnown RBP17.03■□□□□ 0.32
LMO4-201ENST00000370542 PTGISQ16647 500 aa17.03■□□□□ 0.32
LMO4-201ENST00000370542 TAF3Q5VWG9 929 aa17.03■□□□□ 0.32
LMO4-201ENST00000370542 GDF6Q6KF10 455 aaPredicted RBP17.03■□□□□ 0.32
LMO4-201ENST00000370542 TMEM87AQ8NBN3 555 aa17.03■□□□□ 0.32
LMO4-201ENST00000370542 PHOSPHO2Q8TCD6 241 aa17.03■□□□□ 0.32
LMO4-201ENST00000370542 AFAP1L1Q8TED9 768 aa17.03■□□□□ 0.32
LMO4-201ENST00000370542 PPP1R13LQ8WUF5 828 aa17.03■□□□□ 0.32
LMO4-201ENST00000370542 LY9Q9HBG7 655 aa17.03■□□□□ 0.32
LMO4-201ENST00000370542 RBM8AQ9Y5S9 174 aaKnown RBP17.03■□□□□ 0.32
LMO4-201ENST00000370542 MRVI1Q9Y6F6 885 aa17.03■□□□□ 0.32
LMO4-201ENST00000370542 MYH7BA7E2Y1 1941 aa17.02■□□□□ 0.32
LMO4-201ENST00000370542 SYCE3A1L190 88 aa17.02■□□□□ 0.32
LMO4-201ENST00000370542 GCOM1H8Y6P7 765 aaPredicted RBP17.02■□□□□ 0.32
LMO4-201ENST00000370542 POLR2MP0CAP2 368 aa17.02■□□□□ 0.32
LMO4-201ENST00000370542 HOXA13P31271 388 aaPredicted RBP17.02■□□□□ 0.32
LMO4-201ENST00000370542 SP2Q02086 613 aa17.02■□□□□ 0.32
LMO4-201ENST00000370542 TMEM67Q5HYA8 995 aa17.02■□□□□ 0.32
LMO4-201ENST00000370542 CELF3Q5SZQ8 465 aaKnown RBP17.02■□□□□ 0.32
LMO4-201ENST00000370542 CHST3Q7LGC8 479 aa17.02■□□□□ 0.32
LMO4-201ENST00000370542 CATIPQ7Z7H3 387 aa17.02■□□□□ 0.32
LMO4-201ENST00000370542 RETREG2Q8NC44 543 aa17.02■□□□□ 0.32
LMO4-201ENST00000370542 IL31RAQ8NI17 732 aa17.02■□□□□ 0.32
LMO4-201ENST00000370542 DHX38Q92620 1227 aaKnown RBP17.02■□□□□ 0.32
LMO4-201ENST00000370542 KATNAL1Q9BW62 490 aa17.02■□□□□ 0.32
LMO4-201ENST00000370542 SPZ1Q9BXG8 430 aa17.02■□□□□ 0.32
LMO4-201ENST00000370542 LSG1Q9H089 658 aaKnown RBP17.02■□□□□ 0.32
LMO4-201ENST00000370542 NKX2-4Q9H2Z4 354 aa17.02■□□□□ 0.32
LMO4-201ENST00000370542 PRR33A8MZF0 331 aa17.01■□□□□ 0.31
LMO4-201ENST00000370542 DDAH1O94760 285 aa17.01■□□□□ 0.31
LMO4-201ENST00000370542 PARNO95453 639 aaKnown RBP17.01■□□□□ 0.31
LMO4-201ENST00000370542 CXCL10P02778 98 aa17.01■□□□□ 0.31
LMO4-201ENST00000370542 ATP2A2P16615 1042 aaKnown RBP17.01■□□□□ 0.31
LMO4-201ENST00000370542 ICAM3P32942 547 aa17.01■□□□□ 0.31
LMO4-201ENST00000370542 PSEN2P49810 448 aa17.01■□□□□ 0.31
LMO4-201ENST00000370542 NHLH1Q02575 133 aa17.01■□□□□ 0.31
LMO4-201ENST00000370542 HOMER1Q86YM7 354 aa17.01■□□□□ 0.31
LMO4-201ENST00000370542 DHX37Q8IY37 1157 aaKnown RBP17.01■□□□□ 0.31
LMO4-201ENST00000370542 SLC9A7Q96T83 725 aa17.01■□□□□ 0.31
LMO4-201ENST00000370542 SLC28A3Q9HAS3 691 aa17.01■□□□□ 0.31
LMO4-201ENST00000370542 SPTLC3Q9NUV7 552 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms