RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PCDHB6Q9Y5E3 794 aa15.75■□□□□ 0.11
TPM3-211ENST00000368531 IPO5O00410 1097 aaKnown RBP15.74■□□□□ 0.11
TPM3-211ENST00000368531 SOX10P56693 466 aa15.74■□□□□ 0.11
TPM3-211ENST00000368531 NEDD9Q14511 834 aa15.74■□□□□ 0.11
TPM3-211ENST00000368531 GNASQ5JWF2 1037 aa15.74■□□□□ 0.11
TPM3-211ENST00000368531 MYSM1Q5VVJ2 828 aa15.74■□□□□ 0.11
TPM3-211ENST00000368531 PPP4R3AQ6IN85 833 aa15.74■□□□□ 0.11
TPM3-211ENST00000368531 SPATA33Q96N06 139 aa15.74■□□□□ 0.11
TPM3-211ENST00000368531 MBOAT7Q96N66 472 aa15.74■□□□□ 0.11
TPM3-211ENST00000368531 SDF4Q9BRK5 362 aa15.74■□□□□ 0.11
TPM3-211ENST00000368531 TELO2Q9Y4R8 837 aa15.74■□□□□ 0.11
TPM3-211ENST00000368531 NEMFO60524 1076 aa15.73■□□□□ 0.11
TPM3-211ENST00000368531 FARP2O94887 1054 aaPredicted RBP15.73■□□□□ 0.11
TPM3-211ENST00000368531 F13A1P00488 732 aa15.73■□□□□ 0.11
TPM3-211ENST00000368531 PDIA4P13667 645 aaKnown RBP15.73■□□□□ 0.11
TPM3-211ENST00000368531 EN2P19622 333 aaPredicted RBP15.73■□□□□ 0.11
TPM3-211ENST00000368531 GJA8P48165 433 aa15.73■□□□□ 0.11
TPM3-211ENST00000368531 TRAPPC10P48553 1259 aa15.73■□□□□ 0.11
TPM3-211ENST00000368531 GJA9P57773 515 aa15.73■□□□□ 0.11
TPM3-211ENST00000368531 ITGB3BPQ13352 177 aaPredicted RBP15.73■□□□□ 0.11
TPM3-211ENST00000368531 LAMC2Q13753 1193 aa15.73■□□□□ 0.11
TPM3-211ENST00000368531 LRRC41Q15345 812 aa15.73■□□□□ 0.11
TPM3-211ENST00000368531 CALCRLQ16602 461 aa15.73■□□□□ 0.11
TPM3-211ENST00000368531 FSCN1Q16658 493 aaKnown RBP15.73■□□□□ 0.11
TPM3-211ENST00000368531 RILPL1Q5EBL4 403 aa15.73■□□□□ 0.11
TPM3-211ENST00000368531 LRCH2Q5VUJ6 765 aa15.73■□□□□ 0.11
TPM3-211ENST00000368531 ARRDC4Q8NCT1 418 aa15.73■□□□□ 0.11
TPM3-211ENST00000368531 GIMAP8Q8ND71 665 aaPredicted RBP15.73■□□□□ 0.11
TPM3-211ENST00000368531 SENP7Q9BQF6 1050 aa15.73■□□□□ 0.11
TPM3-211ENST00000368531 TMEM60Q9H2L4 133 aa15.73■□□□□ 0.11
TPM3-211ENST00000368531 ZSCAN16Q9H4T2 348 aaPredicted RBP15.73■□□□□ 0.11
TPM3-211ENST00000368531 OGDHLQ9ULD0 1010 aa15.73■□□□□ 0.11
TPM3-211ENST00000368531 Q9Y3F1 56 aa15.73■□□□□ 0.11
TPM3-211ENST00000368531 NOP56O00567 594 aaKnown RBP15.72■□□□□ 0.11
TPM3-211ENST00000368531 GAS7O60861 476 aa15.72■□□□□ 0.11
TPM3-211ENST00000368531 ADAMTS4O75173 837 aa15.72■□□□□ 0.11
TPM3-211ENST00000368531 BAG4O95429 457 aaKnown RBP15.72■□□□□ 0.11
TPM3-211ENST00000368531 MYL3P08590 195 aa15.72■□□□□ 0.11
TPM3-211ENST00000368531 CEBPZQ03701 1054 aaKnown RBP15.72■□□□□ 0.11
TPM3-211ENST00000368531 HSDL1Q3SXM5 330 aa15.72■□□□□ 0.11
TPM3-211ENST00000368531 RNF180Q86T96 592 aa15.72■□□□□ 0.11
TPM3-211ENST00000368531 SLC5A5Q92911 643 aa15.72■□□□□ 0.11
TPM3-211ENST00000368531 IPO9Q96P70 1041 aaKnown RBP15.72■□□□□ 0.11
TPM3-211ENST00000368531 CRISPLD2Q9H0B8 497 aa15.72■□□□□ 0.11
TPM3-211ENST00000368531 UPF3AQ9H1J1 476 aaKnown RBP15.72■□□□□ 0.11
TPM3-211ENST00000368531 JPH1Q9HDC5 661 aaPredicted RBP15.72■□□□□ 0.11
TPM3-211ENST00000368531 ZDHHC9Q9Y397 364 aa15.72■□□□□ 0.11
TPM3-211ENST00000368531 NFASCO94856 1347 aa15.71■□□□□ 0.11
TPM3-211ENST00000368531 CTAGE5O15320 804 aa15.71■□□□□ 0.11
TPM3-211ENST00000368531 DHX15O43143 795 aaKnown RBP15.71■□□□□ 0.11
TPM3-211ENST00000368531 CHMP2AO43633 222 aa15.71■□□□□ 0.11
TPM3-211ENST00000368531 BRD1O95696 1058 aa15.71■□□□□ 0.11
TPM3-211ENST00000368531 TXKP42681 527 aa15.71■□□□□ 0.11
TPM3-211ENST00000368531 CHMP4BP1P59074 171 aa15.71■□□□□ 0.11
TPM3-211ENST00000368531 PTGDRQ13258 359 aa15.71■□□□□ 0.11
TPM3-211ENST00000368531 KCNA10Q16322 511 aa15.71■□□□□ 0.11
TPM3-211ENST00000368531 UTP14CQ5TAP6 766 aaKnown RBP15.71■□□□□ 0.11
TPM3-211ENST00000368531 METTL7BQ6UX53 244 aa15.71■□□□□ 0.11
TPM3-211ENST00000368531 KLHDC9Q8NEP7 349 aa15.71■□□□□ 0.11
TPM3-211ENST00000368531 ETNPPLQ8TBG4 499 aa15.71■□□□□ 0.11
TPM3-211ENST00000368531 HAS1Q92839 578 aa15.71■□□□□ 0.11
TPM3-211ENST00000368531 TEKT3Q9BXF9 490 aa15.71■□□□□ 0.11
TPM3-211ENST00000368531 FTOQ9C0B1 505 aaKnown RBP eCLIP15.71■□□□□ 0.117e-6■■□□□ 12.9
TPM3-211ENST00000368531 KCNMB3Q9NPA1 279 aa15.71■□□□□ 0.11
TPM3-211ENST00000368531 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.71■□□□□ 0.11
TPM3-211ENST00000368531 TBC1D22BQ9NU19 505 aa15.71■□□□□ 0.11
TPM3-211ENST00000368531 TFIP11Q9UBB9 837 aaKnown RBP15.71■□□□□ 0.11
TPM3-211ENST00000368531 SLC9A2Q9UBY0 812 aa15.71■□□□□ 0.11
TPM3-211ENST00000368531 TCEAL9Q9UHQ7 104 aa15.71■□□□□ 0.11
TPM3-211ENST00000368531 KBTBD13C9JR72 458 aa15.7■□□□□ 0.1
TPM3-211ENST00000368531 MMP3P08254 477 aa15.7■□□□□ 0.1
TPM3-211ENST00000368531 CPT1AP50416 773 aa15.7■□□□□ 0.1
TPM3-211ENST00000368531 BRDTQ58F21 947 aaPredicted RBP15.7■□□□□ 0.1
TPM3-211ENST00000368531 EMID1Q96A84 441 aaPredicted RBP15.7■□□□□ 0.1
TPM3-211ENST00000368531 FERMT2Q96AC1 680 aa15.7■□□□□ 0.1
TPM3-211ENST00000368531 VTI1AQ96AJ9 217 aa15.7■□□□□ 0.1
TPM3-211ENST00000368531 FAM20AQ96MK3 541 aa15.7■□□□□ 0.1
TPM3-211ENST00000368531 SAMM50Q9Y512 469 aa15.7■□□□□ 0.1
TPM3-211ENST00000368531 CLIC4Q9Y696 253 aa15.7■□□□□ 0.1
TPM3-211ENST00000368531 WDR81Q562E7 1941 aa15.7■□□□□ 0.1
TPM3-211ENST00000368531 HTTP42858 3142 aa15.7■□□□□ 0.1
TPM3-211ENST00000368531 GSTTP1A0A1W2PQM5 241 aa15.69■□□□□ 0.1
TPM3-211ENST00000368531 TBX3O15119 743 aa15.69■□□□□ 0.1
TPM3-211ENST00000368531 ZEB2O60315 1214 aa15.69■□□□□ 0.1
TPM3-211ENST00000368531 PSMD10O75832 226 aa15.69■□□□□ 0.1
TPM3-211ENST00000368531 CCNE2O96020 404 aa15.69■□□□□ 0.1
TPM3-211ENST00000368531 ASGR1P07306 291 aa15.69■□□□□ 0.1
TPM3-211ENST00000368531 OR52Z1P0C646 297 aa15.69■□□□□ 0.1
TPM3-211ENST00000368531 DDIT3P35638 169 aa15.69■□□□□ 0.1
TPM3-211ENST00000368531 ACTR2P61160 394 aa15.69■□□□□ 0.1
TPM3-211ENST00000368531 NUCB2P80303 420 aa15.69■□□□□ 0.1
TPM3-211ENST00000368531 SF3A1Q15459 793 aaKnown RBP15.69■□□□□ 0.1
TPM3-211ENST00000368531 CXCL17Q6UXB2 119 aa15.69■□□□□ 0.1
TPM3-211ENST00000368531 SLFN12Q8IYM2 578 aa15.69■□□□□ 0.1
TPM3-211ENST00000368531 PCSK9Q8NBP7 692 aaKnown RBP15.69■□□□□ 0.1
TPM3-211ENST00000368531 PPTC7Q8NI37 304 aa15.69■□□□□ 0.1
TPM3-211ENST00000368531 DIS3LQ8TF46 1054 aaKnown RBP15.69■□□□□ 0.1
TPM3-211ENST00000368531 CHAMP1Q96JM3 812 aa15.69■□□□□ 0.1
TPM3-211ENST00000368531 MTMR9Q96QG7 549 aa15.69■□□□□ 0.1
TPM3-211ENST00000368531 RIT2Q99578 217 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms