RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 APOBRQ0VD83 1088 aa27.09■■□□□ 1.93
SHC1-201ENST00000366442 PTK7Q13308 1070 aa27.09■■□□□ 1.93
SHC1-201ENST00000366442 TYW1BQ6NUM6 668 aa27.09■■□□□ 1.93
SHC1-201ENST00000366442 DEFB128Q7Z7B8 93 aa27.09■■□□□ 1.93
SHC1-201ENST00000366442 DHX38Q92620 1227 aaKnown RBP27.09■■□□□ 1.93
SHC1-201ENST00000366442 BRF1Q92994 677 aa27.09■■□□□ 1.93
SHC1-201ENST00000366442 GPR20Q99678 358 aa27.09■■□□□ 1.93
SHC1-201ENST00000366442 GLT8D2Q9H1C3 349 aa27.09■■□□□ 1.93
SHC1-201ENST00000366442 PPP4R2Q9NY27 417 aa27.09■■□□□ 1.93
SHC1-201ENST00000366442 BARHL2Q9NY43 387 aa27.09■■□□□ 1.93
SHC1-201ENST00000366442 NAP1L2Q9ULW6 460 aaPredicted RBP27.09■■□□□ 1.93
SHC1-201ENST00000366442 SLC4A7Q9Y6M7 1214 aa27.09■■□□□ 1.93
SHC1-201ENST00000366442 TRIP12Q14669 1992 aaPredicted RBP27.09■■□□□ 1.93
SHC1-201ENST00000366442 H3BRB1 525 aa27.08■■□□□ 1.93
SHC1-201ENST00000366442 STXBP3O00186 592 aa27.08■■□□□ 1.93
SHC1-201ENST00000366442 PARNO95453 639 aaKnown RBP27.08■■□□□ 1.93
SHC1-201ENST00000366442 ACTN1P12814 892 aa27.08■■□□□ 1.93
SHC1-201ENST00000366442 ITGB5P18084 799 aa27.08■■□□□ 1.93
SHC1-201ENST00000366442 RAB30Q15771 203 aa27.08■■□□□ 1.93
SHC1-201ENST00000366442 TUT1Q9H6E5 874 aaKnown RBP27.08■■□□□ 1.93
SHC1-201ENST00000366442 UBIAD1Q9Y5Z9 338 aa27.08■■□□□ 1.93
SHC1-201ENST00000366442 DOCK5Q9H7D0 1870 aa27.07■■□□□ 1.92
SHC1-201ENST00000366442 MAFGO15525 162 aa27.07■■□□□ 1.92
SHC1-201ENST00000366442 FOSP01100 380 aaPredicted RBP27.07■■□□□ 1.92
SHC1-201ENST00000366442 SELPP16109 830 aa27.07■■□□□ 1.92
SHC1-201ENST00000366442 ADD1P35611 737 aaKnown RBP27.07■■□□□ 1.92
SHC1-201ENST00000366442 PBX2P40425 430 aa27.07■■□□□ 1.92
SHC1-201ENST00000366442 ZNF576Q9H609 170 aa27.07■■□□□ 1.92
SHC1-201ENST00000366442 MSRAQ9UJ68 235 aa27.07■■□□□ 1.92
SHC1-201ENST00000366442 KCNA2P16389 499 aa27.06■■□□□ 1.92
SHC1-201ENST00000366442 HOXC8P31273 242 aa27.06■■□□□ 1.92
SHC1-201ENST00000366442 ADCY7P51828 1080 aa27.06■■□□□ 1.92
SHC1-201ENST00000366442 LRRC8DQ7L1W4 858 aa27.06■■□□□ 1.92
SHC1-201ENST00000366442 CHD9Q3L8U1 2897 aa27.06■■□□□ 1.92
SHC1-201ENST00000366442 ZBBXA8MT70 800 aa27.05■■□□□ 1.92
SHC1-201ENST00000366442 CKBP12277 381 aa27.05■■□□□ 1.92
SHC1-201ENST00000366442 MTMR1Q13613 665 aa27.05■■□□□ 1.92
SHC1-201ENST00000366442 PFKFB3Q16875 520 aaPredicted RBP27.05■■□□□ 1.92
SHC1-201ENST00000366442 JADE2Q9NQC1 790 aa27.05■■□□□ 1.92
SHC1-201ENST00000366442 SMCO2A6NFE2 343 aa27.04■■□□□ 1.92
SHC1-201ENST00000366442 EVCP57679 992 aa27.04■■□□□ 1.92
SHC1-201ENST00000366442 AP3B2Q13367 1082 aa27.04■■□□□ 1.92
SHC1-201ENST00000366442 HIC1Q14526 733 aa27.04■■□□□ 1.92
SHC1-201ENST00000366442 TRIM71Q2Q1W2 868 aaKnown RBP27.04■■□□□ 1.92
SHC1-201ENST00000366442 SLC17A8Q8NDX2 589 aa27.04■■□□□ 1.92
SHC1-201ENST00000366442 FTOQ9C0B1 505 aaKnown RBP eCLIP27.04■■□□□ 1.92
SHC1-201ENST00000366442 ZNF215Q9UL58 517 aaPredicted RBP27.04■■□□□ 1.92
SHC1-201ENST00000366442 C17orf102A2RUQ5 167 aa27.03■■□□□ 1.92
SHC1-201ENST00000366442 ATP9AO75110 1047 aa27.03■■□□□ 1.92
SHC1-201ENST00000366442 SMIM10L2AP0DMW4 78 aa27.03■■□□□ 1.92
SHC1-201ENST00000366442 SMIM10L2BP0DMW5 78 aa27.03■■□□□ 1.92
SHC1-201ENST00000366442 SCG2P13521 617 aa27.03■■□□□ 1.92
SHC1-201ENST00000366442 ATP2A2P16615 1042 aaKnown RBP27.03■■□□□ 1.92
SHC1-201ENST00000366442 ZNF200P98182 395 aaPredicted RBP27.03■■□□□ 1.92
SHC1-201ENST00000366442 RUFY3Q7L099 469 aa27.03■■□□□ 1.92
SHC1-201ENST00000366442 SERINC5Q86VE9 423 aa27.03■■□□□ 1.92
SHC1-201ENST00000366442 TET1Q8NFU7 2136 aa27.03■■□□□ 1.92
SHC1-201ENST00000366442 MYLIPQ8WY64 445 aa27.03■■□□□ 1.92
SHC1-201ENST00000366442 ZSWIM6Q9HCJ5 1215 aa27.03■■□□□ 1.92
SHC1-201ENST00000366442 BAIAP3O94812 1187 aa27.02■■□□□ 1.92
SHC1-201ENST00000366442 CXCL10P02778 98 aa27.02■■□□□ 1.92
SHC1-201ENST00000366442 CLK2P49760 499 aaKnown RBP27.02■■□□□ 1.92
SHC1-201ENST00000366442 GPNMBQ14956 572 aa27.02■■□□□ 1.92
SHC1-201ENST00000366442 GRIN2CQ14957 1233 aa27.02■■□□□ 1.92
SHC1-201ENST00000366442 PHOSPHO2Q8TCD6 241 aa27.02■■□□□ 1.92
SHC1-201ENST00000366442 ANO3Q9BYT9 981 aa27.02■■□□□ 1.92
SHC1-201ENST00000366442 TELO2Q9Y4R8 837 aa27.02■■□□□ 1.92
SHC1-201ENST00000366442 GBF1Q92538 1859 aa27.02■■□□□ 1.92
SHC1-201ENST00000366442 EYSQ5T1H1 3165 aa27.01■■□□□ 1.92
SHC1-201ENST00000366442 A0A0C4DFX4 3053 aa27.01■■□□□ 1.91
SHC1-201ENST00000366442 ESYT2A0FGR8 921 aa27.01■■□□□ 1.91
SHC1-201ENST00000366442 PRPF3O43395 683 aaKnown RBP27.01■■□□□ 1.91
SHC1-201ENST00000366442 SP4Q02446 784 aa27.01■■□□□ 1.91
SHC1-201ENST00000366442 TRAF7Q6Q0C0 670 aa27.01■■□□□ 1.91
SHC1-201ENST00000366442 SEPT1Q8WYJ6 367 aa27.01■■□□□ 1.91
SHC1-201ENST00000366442 ATP6V0A1Q93050 837 aa27.01■■□□□ 1.91
SHC1-201ENST00000366442 WNT8BQ93098 351 aa27.01■■□□□ 1.91
SHC1-201ENST00000366442 SLC9A7Q96T83 725 aa27.01■■□□□ 1.91
SHC1-201ENST00000366442 MXRA8Q9BRK3 442 aa27.01■■□□□ 1.91
SHC1-201ENST00000366442 TM6SF1Q9BZW5 370 aa27.01■■□□□ 1.91
SHC1-201ENST00000366442 RNPEPQ9H4A4 650 aa27.01■■□□□ 1.91
SHC1-201ENST00000366442 PCDHA11Q9Y5I1 949 aa27.01■■□□□ 1.91
SHC1-201ENST00000366442 GNAT1P11488 350 aa27■■□□□ 1.91
SHC1-201ENST00000366442 FOSL2P15408 326 aa27■■□□□ 1.91
SHC1-201ENST00000366442 SREBF1P36956 1147 aa27■■□□□ 1.91
SHC1-201ENST00000366442 TRIM50Q86XT4 487 aa27■■□□□ 1.91
SHC1-201ENST00000366442 CCDC12Q8WUD4 166 aaPredicted RBP27■■□□□ 1.91
SHC1-201ENST00000366442 KCNH7Q9NS40 1196 aa27■■□□□ 1.91
SHC1-201ENST00000366442 YBX2Q9Y2T7 364 aaKnown RBP27■■□□□ 1.91
SHC1-201ENST00000366442 CYP46A1Q9Y6A2 500 aa27■■□□□ 1.91
SHC1-201ENST00000366442 NBNO60934 754 aa26.99■■□□□ 1.91
SHC1-201ENST00000366442 PDIA3P30101 505 aaKnown RBP26.99■■□□□ 1.91
SHC1-201ENST00000366442 TCF7P36402 384 aaPredicted RBP26.99■■□□□ 1.91
SHC1-201ENST00000366442 NTRK3Q16288 839 aa26.99■■□□□ 1.91
SHC1-201ENST00000366442 PKN1Q16512 942 aa26.99■■□□□ 1.91
SHC1-201ENST00000366442 CEP55Q53EZ4 464 aa26.99■■□□□ 1.91
SHC1-201ENST00000366442 ZNF618Q5T7W0 954 aa26.99■■□□□ 1.91
SHC1-201ENST00000366442 UTP14CQ5TAP6 766 aaKnown RBP26.99■■□□□ 1.91
SHC1-201ENST00000366442 PGBD1Q96JS3 809 aa26.99■■□□□ 1.91
SHC1-201ENST00000366442 ZMYND12Q9H0C1 365 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms